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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15562#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1144 fasta sequence
[AACCGAAATCCCCTCCTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCG-CCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGC-TCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGT-CCCATTGTATCATTATC-AGCACAAACACCCAC-ACAACTTTGTTTACCT-GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC-ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG-CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT-GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG-CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT-ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT-GTTGAGCT-CTACC-TTGACATCC-TCAACTTGTTCCTTT-AT-A-TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA-TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA-CTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAATAATTTTTA-CCCTGCGATGTTCGTGAAAAAAAGAAAAAAA]
[+] EMBL AU094031 [AACCGAAATCCCCTCCTGACCTCCTTCCTCCTCTCTNCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCG CGGNCG CCGGAGATGAAGGAGAAGGTGGACNCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCA NTGC TCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACNCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCG ]
[+] EMBL AK070043 [ AAATCCCCTCCTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCG CCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGC TCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGT CCCATTGTATCATTATC AGCACAAACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTG ]
[+] EMBL AK104366 [ AATCCCCTCCTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCG CCGGAGATGAAGGAGAAGGTGGGCGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGC TCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGT CCCATTGTATCATTATC AGCACAAACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTT ]
[+] EMBL AK104199 [ AATCCCCTCCTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCGGGCG CCGGAGATGAAGGAGAAGGTGGGCGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGC TCCTCACCACCGCCGTCTCCGCGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCCTCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGT CCCATTGTATCATTATC AGCACAAACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTT ]
[+] EMBL AU070225 [ CTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCG GGACGACCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCNCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAANGTGTACn ]
[+] EMBL C71823 [ TGACCTCCTTCCTCCTCTNTCCCCGATTCCCCCCACCCACCNACCAAGCGCGTCGGAAGCNATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTACCGCCNGNC CCGGANATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAA GTGTACGGCATCCTCGCCGCG AG TGC TCCTNACCACC ]
[+] EMBL AU184524 [ ACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGNTGGCCCCGGCGGGCTACCGCCGGGCG CCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCGGCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGCAAGGTGTACGGCATNCTCGCCGCGC ]
[+] EMBL OSC31182 [ CCTCCTCTCTCCCCGATTCCCCCCACCCACCCACCAAGCGCGTCGGAAGCGATGGCGTNGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCTA NACNGGNAGNCCGGAGATGAAGGAGAAGGTGGACGNCTCCGCGGTGGACCTGGAGGCCGGNACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGTTCGTCCGAAAGGTGTACGGCATCCTCGCCGCGAAG TGCTTCCTCACCACCGCCGTNTCCGGGNTAACCGTCCTCCA CCCAACCTNAACGg ]
[+] EMBL AU094032 [ ctTTCGTCCTGATGGTCCCCATGGTNTCATTATCAAGCAC AACACCCACAACAACTTTGTTTACCTGGGGTCTGTTCACGTTGTGCTTGAGTTNCAGTATTGGTGTGGCATGTGCTAACNACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTAaaa aa ]
[+] EMBL C72853 [ TATCATTATC AGCACAAACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTGGTCCCTTA AN A NCCNGAACATGATCAGGAGCATGCc ]
[+] EMBL OSS2692A [ ctanAACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTG ]
[+] EMBL OSS2634A [ caagacACACCCAC ACAACTTTGTTTACCT GGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTGTGGCATGTGCTAAC ACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATC ]
[+] EMBL BI800088 [ CTTGA GCA TAATATTGACCTCAGCTGTGGTTGCCTCTGTGACTGCGTATACTTTCTGGG CTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCT GTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGGCCTCTGGACCAGTTGCATTGTTT GTGGCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCT ACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTTTTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGC ATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTC AAGGATGAGACCGAAGTAC ATATATGTATAGTTTTGGTTGTGTTGAGTATGACCTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAAAAAaaa ]
[+] EMBL BI806307 [ GTATACTTTCTGGGCCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCCATTCTGGTTTTCTGCTCTTTGTTTACGTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGG CTCTGGACCAGTTGCATTGTTTGGT GCCTTGGAGCTTTAGTTTTCTCAGGTTTCATCATCTGACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTTGAN A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTTTTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACA CCATCTATATAACCGTGAAAACCTCGTGATGTATTTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTT GTT T TTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTGACGTGGT CC ATAATTTTTACCCCTGCGATGTTCGTGAAAAAA ]
[+] EMBL AA749749 [ TGACGACTACATTTGGGCCTCT GTTGAGCT CTACC TTGACATCC TCAACTTGTTCCTTT AT A TCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCATGGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCAATCTATATAACCGTGAAAACCTCGTGATGTA TTTTG ]
[+] EMBL AU033086 [ TTGGGCCTCTAGNTGCGCT CTCCC TTGACATCC TCAACTTGTNCCTTT AT ATTCCTNACCATGATCAGGAGCATGCAAAGTNATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAATAATTTTTA CCCTGCGATGNTCGTGAAAAAAAGNAAAAAA]
[+] EMBL AU097159 [ CCTCT GTTGAGCTNCTACCTTTGACATCCTTCAACTTGTCCCTTT ATNATTCCTGAACATGATCAGGAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAATAATTTTTA CCCTGCGATGTTCGTGAAAAAAAGAAAAA ]
[+] EMBL AU173812 [ GGAGCATGCAAAGTNATAACTAGCCAGTCCATCAGCNCCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTNTATTAAGTACTATTTTGAACAGCGATNTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTNTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAATAATTTTTA CCCTGCGATGTTNGTGAAAAAAAAAAAA ]
[+] EMBL C99025 [ cgGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTA TTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAGTATGA CTGTCGGAAATGTGATCCCATGATTGTGACGTGGTGCCAATAAaaaa ]
consensusID : consensus_15562#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[TGGTGAATTAAACCGTTTTATTGCAGGGTGGTGCTTGCCCATTGGGCTGCTGGACCAAGTTGCATTTGGTTTTGGGTGCCCTTGGGGAGCTTTAGTGTTTTGCTCCAGGTTTGCAATGCATGCTGACGGACACCAGGAGAACTTGGATGATAAGCGCCAACAACTGTGATGGACGACTGACAATTTGGGGCACTGCTGGTTGGAGCTGCTGACCTGTGACAATGCCTGCAAACTGTGGTGTGCACTGTGTATGATGCCTGGAACAATGGATGCAGGAGCAATGGCAAAGTGGATGAACTGAGCCAAGTGCCATGCCAAGCACCAAACCAGACGTTTGTGTGCAAACTTGGCTGCCAGTGACAGTGCAGTGGTGGTGCACTGGCTGCTGATTGAAGTGACTGATGTTTGGAACAAGCAATGCTGATGATGAACCGTGGAAAACCTGCGTGGATGTGATTTTCCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACATATATGTATATTTTGGTTGTTTGAGTATGACTGTCGGAAATGTGATCCCATGATTGTGACGTGGTCCAAAAAAAA]
[+] EMBL BI797853 [TGGTGAATTAAACCGTTTTATTGCAGGGTGGTGCTTGCCCATTGGGCTGCTGGACCAAGTTGCATTTGGTTTTGGGTGCCCTTGGGGAGCTTTAGTGTTTTGCTCCAGGTTTGCAATGCATGCTGACGGACACCAGGAGAACTTGGATGATAAGCGCCAACAACTGTGATGGACGACTGACAATTTGGGGCACTGCTGGTTGGAGCTGCTGACCTGTGACAATGCCTGCAAACTGTGGTGTGCACTGTGTATGATGCCTGGAACAATGGATGCAGGAGCAATGGCAAAGTGGATGAACTGAGCCAAGTGCCATGCCAAGCACCAAACCAGACGTTTGTGTGCAAACTTGGCTGCCAGTGACAGTGCAGTGGTGGTGCACTGGCTGCTGATTGAAGTGACTGATGTTTGGAACAAGCAATGCTGATGATGAACCGTGGAAAACCTGCGTGGATGTGATTTTCCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACATATATGTATATTTTGGTTGTTTGAGTATGACTGTCGGAAATGTGATCCCATGATTGTGACGTGGTCCAAAAAAAA]
consensusID : consensus_15562#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 495 fasta sequence
[GGCATGTCTAACACTCAAGGGAAAATGTGCTGGAGCCATTAATATTGACCTCACTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCTGTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGGCTCTGGACCATTTGCATTGTTTTGGTGCCCTTGGGAGCTTTAGTTTTCTCAGGTTTCAATCATCTACGACACAGAGAACTTGATAAGCCCACACTTATGACGACTACATTTGGCCTCTGTTGAGCTCTACCTGACATCCTCAACTGTTCTTAGATCCGAACATGAATTCAGGACATCAATAATACCATCATCACACAACAACTTTTCACTTCAACTCACCCTCCCCTTATAATATTTGACACATAAACCTGAACCTATTATTTCTCTTACTCAAGATGAACAACAAAAAATTCCCCTGATACC]
[+] EMBL BI805365 [GGCATGTCTAACACTCAAGGGAAAATGTGCTGGAGCCATTAATATTGACCTCACTGTGGTTGCCTCTTTGACTGCGTATACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCTGTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGGTGTTCTTCCCATTGGGCTCTGGACCATTTGCATTGTTTTGGTGCCCTTGGGAGCTTTAGTTTTCTCAGGTTTCAATCATCTACGACACAGAGAACTTGATAAGCCCACACTTATGACGACTACATTTGGCCTCTGTTGAGCTCTACCTGACATCCTCAACTGTTCTTAGATCCGAACATGAATTCAGGACATCAATAATACCATCATCACACAACAACTTTTCACTTCAACTCACCCTCCCCTTATAATATTTGACACATAAACCTGAACCTATTATTTCTCTTACTCAAGATGAACAACAAAAAATTCCCCTGATACC]
consensusID : consensus_15562#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence
[CATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGAACATGATCAGGNGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTATTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU094090 [CATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGAACATGATCAGGNGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTATTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15562#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence
[ACTGACATGGACTGAGGAGTAGAAAAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTATTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF329447 [ACTGACATGGACTGAGGAGTAGAAAAGCATGCAAAGTGATAACTAGCCAGTCCATCAGCACCAACCAGACGTATTGTCAACTTGCTCAGTGACGTCAGTGTGTCCTGCTCTATTAAGTACTATTTTGAACAGCGATCTATATAACCGTGAAAACCTCGTGATGTATTTTGCTGTCGTCTGACTCAAAGGATGAGACCGAAGTACAATATATGTATAGTTTTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 AACCGAAATCCCCTCCTGACCTCCTTCCTCCTCTCTCCCCGATTCCCCCCACCCACCCAC 60
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 CAAGCGCGTCGGAAGCGATGGCGTCGGCGGCGGAGATGCAGCCGCTGGCCCCGGCGGGCT 120
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 ACCGCCGGGCGCCGGAGATGAAGGAGAAGGTGGACGCCTCCGCGGTGGACCTGGAGGCCG 180
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 GCACCGGGGAGACGCTGTACCCGGGGATCTCGCGCGGGGAGAGCGCCCTCCGGTGGGGGT 240
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 TCGTCCGCAAGGTGTACGGCATCCTCGCCGCGCAGCTGCTCCTCACCACCGCCGTCTCCG 300
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 CGCTCACCGTCCTCCACCCCACCCTCAACGCCACGCTCTCCTCCTCCCCGACCCTCGCCC 360
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 TCGTGCTCGCCGTCCTCCCCTTCGTCCTGATGGTCCCATTGTATCATTATCAGCACAAAC 420
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 ACCCACACAACTTTGTTTACCTGGGTCTGTTCACGTTGTGCTTGAGTTTCAGTATTGGTG 480
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 ------------------------------------------------------------
consensus_15562#0 TGGCATGTGCTAACACTCAAGGGAAAATTGTGCTTGAGGCATTAATATTGACCTCAGCTG 540
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 -------------------------------TGGTGAATTAAACCGTTTTATTGCAGGGT 29
consensus_15562#0 TGGTTGCCTCTTTGACTGCGTATACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTT 600
consensus_15562#2 ------------------------------------------------------------
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 GGTGCTTGCCCATTGGGCTGCTGGACCAAGTTGCATTTGGTTTTGGGTGCCCT---TGGG 86
consensus_15562#0 ATCTTGGACCAATTCTGTTTTCTGCTCTTGTTTTACTTGTTGTGATAAGCTTTATTCAGG 660
consensus_15562#2 -----------------------------------------GGCATGTCTAACACTCAAG 19
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 GAGCTTTAGTGTTTTGCTCCAGGTTTGCAATGCATGCTGACGGACACCAGGAG--AACTT 144
consensus_15562#0 TGTTCTTCCCATTGGGCTCTGGACCAGTTGCATTGTTTGGTGGCCTTGGAGCTTTAGTTT 720
consensus_15562#2 GGAAAATGTGCTGGAGCCATTAATATTGACCTCACTGTGGTTGCCTCTTTGACTGCGTAT 79
consensus_15562#3 ------------------------------------------------------------
consensus_15562#4 ------------------------------------------------------------
consensus_15562#1 GGATGATAAGCGCCAACAACTGTGATGGACGACTGACAATTTGGGGCACTGCTG--GTTG 202
consensus_15562#0 TCTCAGGTTTCATCATCTACGACACAGAGAACTTGATAAAGCGCCACACTTATGACGACT 780
consensus_15562#2 ACTTTCTGGGCTTCAAAGAAGGGGAAAGAATTTGGTTATCTTGGACCAATTCTGTTTTCT 139
consensus_15562#3 -CATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGA 59
consensus_15562#4 ---------------------------------------------ACTGACATGGACTGA 15
consensus_15562#1 GAGCTGCTGACCTGTGACAATGCCTGCAAACTGTGGTGTGCACTGTGTATGATGCCTGGA 262
consensus_15562#0 ACATTTGGGCCTCTGTTGAGCTCTACCTTGACATCCTCAACTTGTTCCTTTATATCCTGA 840
consensus_15562#2 GCTCTTGTTTTACTTGTTGTGATAAGCTTTAT-TCAGGTGTTCTTCCCATTGGGCTCTGG 198
*
consensus_15562#3 ACATGATC---AGGNGCAT----GCAAAGTGAT--AACT-AGCCAGT--CCATC---AGC 104
consensus_15562#4 GGAGTAG----AAAAGCAT----GCAAAGTGAT--AACT-AGCCAGT--CCATC---AGC 59
consensus_15562#1 ACAATGGATGCAGGAGCAATG--GCAAAGTGGATGAACTGAGCCAAGTGCCATGCCAAGC 320
consensus_15562#0 ACATGATC---AGGAGCAT----GCAAAGTGAT--AACT-AGCCAGT--CCATC---AGC 885
consensus_15562#2 ACCATTTGCATTGTTTTGGTGCCCTTGGGAGCTTTAGTTTTCTCAGGTTTCAATC--ATC 256
* * * * ** ** * *
consensus_15562#3 ACCAA-CCAGACGTAT---T--GTCAACTTGCTCAGTGACGTCAGT--GT----GTCCTG 152
consensus_15562#4 ACCAA-CCAGACGTAT---T--GTCAACTTGCTCAGTGACGTCAGT--GT----GTCCTG 107
consensus_15562#1 ACCAAACCAGACGTTTGTGT--GCAAACTTGGCTGCCAGTGACAGT--GCAGTGGTGGTG 376
consensus_15562#0 ACCAA-CCAGACGTAT---T--GTCAACTTGCTCAGTGACGTCAGT--GT----GTCCTG 933
consensus_15562#2 TACGACACAGAGAACTTGATAAGCCCACACTTATGACGACTACATTTGGCCTCTGTTGAG 316
* * **** * * * ** ** * * ** *
consensus_15562#3 CTCT-------------ATTAAGTACTAT-TTTGAACA-GCGATCTATAT----AACCGT 193
consensus_15562#4 CTCT-------------ATTAAGTACTAT-TTTGAACA-GCGATCTATAT----AACCGT 148
consensus_15562#1 CACTGGCTGCTGATTGAAGTGACTGATGT-TTGGAACAAGCAATGCTGATGATGAACCGT 435
consensus_15562#0 CTCT-------------ATTAAGTACTAT-TTTGAACA-GCGATCTATAT----AACCGT 974
consensus_15562#2 CTCTACCTGACATCCTCAACTGTTCTTAGATCCGAACATGAATTCAGGAC-ATCAATAAT 375
* ** * * * * ***** * * * ** *
consensus_15562#3 GAAAACCTCGTG---ATGT-ATTTTGCTGTCGTCTGAC--TCAAAGGATGAGACCGAAGT 247
consensus_15562#4 GAAAACCTCGTG---ATGT-ATTTTGCTGTCGTCTGAC--TCAAAGGATGAGACCGAAGT 202
consensus_15562#1 GGAAAACCTGCGTGGATGTGATTTTCCTGTCGTCTGAC--TCAAAGGATGAGACCGAAGT 493
consensus_15562#0 GAAAACCTCGTG---ATGT-ATTTTGCTGTCGTCTGAC--TCAAAGGATGAGACCGAAGT 1028
consensus_15562#2 ACCATCATCACACA-ACAACTTTTCACT-TCAACTCACCCTCCCCTTATAATATTTGA-C 432
* * *** ** ** ** ** ** ** * * *
consensus_15562#3 ACAATATATGTATAGTT-TTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 306
consensus_15562#4 ACAATATATGTATAGTT-TTGGTTGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 261
consensus_15562#1 ACA-TATATGTATA-TT-TTGGTTGT-TTGAGTATGACTGTCGGAAATGTGATCCCATGA 549
consensus_15562#0 ACAATATATGTATAGTT-TTGGTTGTGTTGAGTATGACTGTCGGAAATGTGATCCCATGA 1087
consensus_15562#2 ACA-TAAACCTGAACCTATTATTTCTCTTACTCAAGATGAACAACAAAAAATTCCCCTGA 491
*** ** * * * * ** ** * ** * * ** *
consensus_15562#3 AAAAA---------------------------------------------------- 311
consensus_15562#4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 307
consensus_15562#1 TTGTGACGTGGTCCAAAAAAAA----------------------------------- 571
consensus_15562#0 TTGTGACGTGGTGCCAATAATTTTTACCCTGCGATGTTCGTGAAAAAAAGAAAAAAA 1144
consensus_15562#2 TACC----------------------------------------------------- 495
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||