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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15578#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1456 fasta sequence
[CCTGCAATTCCAGTCCTCTGTTGCTTGACATCTGGACTGAAAAATTTGTGTGATCTTTTGAAGTCTGCTCTTGAATGGATATCGGGATACAGGCATTTGAAGTTGAAAGATTACATAAGATATGTTGCCTAGTTGATTACAGGAGCTTGTCCTTTTGATCTATATCTGCTAAACTTGTAATTATCTCCTCATGCTATTCGAACAAAGTAGTTCCTATTTTTCTTGCTCATGCTTAAGGACTGACTTTATCTGTTTCATATGCAAGATGGATGTTGTAGTAAAAAAATTGGGGCTTAGAAGTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACCACGTGGATGTCAGGTAAACACAATTAACTCTAGATTTAATGTCCATTTAATAATGTACAAGCTAGAGTTAGTCTGAAACAGCACTGTAACTTCAGATTTTGCCTCTGCCTAATGTTGAGGTATTGATTGGAGGTATATGACTACATCTATATGGATCTGAATTCTGATGCAATCACAAGTATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGTATGGAAACACTACAACAGAATGCTAGAATATGACTGCTGCTGCAGTTTTCGTTTGCAGTTTTGATGTTTTGATTTTCATTGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGGTACATTGTTCTACCACCAAATTATGACATGGTTCATCACAATCCACTGCCCAGTTCTAACTGCAGATTTCTTGGTTGCCAGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAG]
[+] EMBL AU198000 [CCTGCAATTCCAGTCCTCTGTTGCTTGACATCTGGACTGAAAAATTTGTGTGATCTTTTGAAGTCTGCTCTTGAATGGATATCGGGATACAGGCATTTGAAGTTGAAAGATTACATAAGATATGTTGCCTAGTTGATTACAGGAGCTTGTCCTTTTGATCTATATCTGCTAAACTTGTAATTATCTCCTCATGCTATTCGAACAAAGTAGTTCCTATTTTTCTTGCTCATGCTTAAGGACTGACTTTATCTGTTTCATATGCAAGATGGATGTTGTAGTAAAAAAATTGGGGCTTAGAAGTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACCACGTGGATGTCAGGTAAACACAATTAACTCTAGATTTAATGTCCATTTAATAATGTACAAGCTAGAGTTAGTCTGAAACAGC ]
[+] EMBL AU197953 [ TGCAATTCCAGTCCTCTGTTGCTTGACATCTGGACTGAAAAATTTGTGTGATCTTTTGAAGTCTGCTCTTGAATGGATATCGGGATACAGGCATTTGAAGTTGAAAGATTACATAAGATATGTTGCCTAGTTGATTACAGGAGCTTGTCCTTTTGATCTATATCTGCTAAACTTGTAATTATCTCCTCATGCTATTCGAACAAAGTAGTTCCTATTTTTCTTGCTCATGCTTAAGGACTGACTTTATCTGTTTCATATGCAAGATGGATGTTGTAGTAAAAAAATTGGGGCTTAGAAGTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACCACGTGGATGTCAGGTAAACACAATTAACTCTAGATTTAATGTCCATTTAATAATGTACAAGCTAGAGTTAGTCTGAA ]
[+] EMBL AK060882 [ TGGATGTTGTAGTAAAAAAATTGGGGCTTAGAAGTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACCACGTGGATGTCAGGTAAACACAATTAACTCTAGATTTAATGTCCATTTAATAATGTACAAGCTAGAGTTAGTCTGAAACAGCACTGTAACTTCAGATTTTGCCTCTGCCTAATGTTGAGGTATTGATTGGAGGTATATGACTACATCTATATGGATCTGAATTCTGATGCAATCACAAGTATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGTATGGAAACACTACAACAGAATGCTAGAATATGACTGCTGCTGCAGTTTTCGTTTGCAGTTTTGATGTTTTGATTTTCATTGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGGTACATTGTTCTACCACCAAATTATGACATGGTTCATCACAATCCACTGCCCAGTTCTAACTGCAGATTTCTTGGTTGCCAGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAG]
[+] EMBL AK104502 [ TGGATGTTGTAGTAAAAAAATTGGGGCTTAGAAGTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACCACGTGGATGTCAGGTAAACACAATTAACTCTAGATTTAATGTCCATTTAATAATGTACAAGCTAGAGTTAGTCTGAAACAGCACTGTAACTTCAGATTTTGCCTCTGCCTAATGTTGAGGTATTGATTGGAGGTATATGACTACATCTATATGGATCTGAATTCTGATGCAATCACAAGTATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGTATGGAAACACTACAACAGAATGCTAGAATATGACTGCTGCTGCAGTTTTCGTTTGCAGTTTTGATGTTTTGATTTTCATTGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGGTACATTGTTCTACCACCAAATTATGACATGGTTCATCACAATCCACTGCCCAGTTCTAACTGCAGATTTCTTGGTTGCCAGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAG]
consensusID : consensus_15578#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1153 fasta sequence
[CACCTCGCCGCCCGTCGCCGTCGCC-CGTCGCCGCCACTCACCTCTCACCAACAATCGCGACGACGAAAAGAAAAAAAAAAAAAAGAATCTCGTCTCACCCCCAATGG-CGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACGTGCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGCATCCGCTCCGTCGACGTCGACCTCGCCGAGGACATCTCCGAGGCGGCGCTCGTCGCCGAGGTCCACCGCCTCAACGCCGACCCAGCCGTCCATGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTAT-CCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAG-CAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGAT-CAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCAT-CGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAAT-CGGGGTACAG-ACT-CGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK103505 [CACCTCGCCGCCCGTCGCCGTCGCCTCGTCGCCGCCACTCACCTCTCACCAACAATCGCGACGACGAAAAGAAAAAAAAAAAAAAGAATCTCGTCTCACCCCCAATGG CGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACGTGCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGCATCCGCTCCGTCGACGTCGACCTCGCCGAGGACATCTCCGAGGCGGCGCTCGTCGCCGAGGTCCACCGCCTCAACGCCGACCCAGCCGTCCATGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTAT CCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAG CAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGAT CAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCAT CGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAAT CGGGGTACAG ACT CGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAG ]
[+] EMBL CF299781 [CACCTCGCCGCCCGTCGCCGTCGCC CGTCGCCGCCACTCACCTCTCACCAACAATCGCGACGACGAAAAGAAAAA ]
[-] EMBL CF299780 [ ACCTCGCCGCCCGTCGCCGTCGCC CGTCGCCGCCACTCACCTCTCACCAACAATCGCGACGACGAAAAGAAAAAA ]
[+] EMBL CA754048 [ CGTCGCCGCCACTCACCTCTCACCAACAATCGCGACGACGAAAAG AAAAAAAAAAAAAGAATCTCGTCTCACCCCCAATGG CGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACGTGCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGCATCCGCTCCGTCGACGTCGACCTCGCCGAGGACATCTCCGAGGCGGCGCTTGTCGCCGAGGTCCACCGCCTCAACGCCGACCCAGCCGTCCATGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACA ]
[+] EMBL AU173341 [ CACCAACAATCGCGACGACGAAAAG AAAAAAAAAAAAAGAATCTCGTCTCACCCCCAATGGCCGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACGTGCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGCATCCGCTCCGTCGACGTCGACCTCGCCGAGGACATCTCCGAGGCGGCGCTCGTCGCCGAGGTCCACCGNCTCAACGCCGACCCAGCCGTCCATGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTANAGAAAGATGTTGATGGGTTCCATCCTNTGA ]
[+] EMBL AU069425 [ CAACAATCGCGACGACGAAAAG AAAAAAAAAAAAANAATCTCGTCTCACCCCCANTGG CGNAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCAAAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAG ]
[+] EMBL C71718 [ ACGAAAAGAAAAAAAAAAAAAANAATCTCGTCTCACCCCCAATGG CGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGNNAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCANAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGNAGACGTACGTNCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGNATCCGCTCCGTCGACGTCGACCTCGCCGAGGACATCTCCGAGGCGGCGCTC ]
[+] EMBL C71888 [ CCAATGG CGCAGATCATCGACGGGAAGGCGGTCGCCGCCGACATCCGCCGCNAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACAACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACGTGCAGATGAAGCGCAAGGCGTGCGCCGAGGTCGGCATCCGCTCCGTCGACGTCNACCTCGCCGAGGACATCTCCNAGG ]
[+] EMBL AU093749 [ AGCAACATTNTCGGGTTACCTNTATCCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTNTTCACTCCCGGACCCCAAACCCTGAAAGTATTNTCCGTGAAGCCAGACATTGTCATTGCAGCGGCTGGCCAGGCTNTGATGATCCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCCGACGTTGGGACGAACTCCATCAGTGNCCCAACCAGGAAATGCGGGGTACAGAACTNCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACNCGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU197954 [ ACCCCAAACCCTGAAAGTATTGTCCGTGAAG CAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGAT CAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCAT CGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAAT CGGGGTACAG ACT CGTCGGCGATGTGGATTTCGCANAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTNTGGACAAATTCGTTNTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCCTCNAAAAAAAAAAAA ]
[+] EMBL AU198001 [ AAACCCTGAAAGTATTGTCCGTGAAG CAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGAT CAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCAT CGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAAT CGGGGTACAG ACT CGTCGGCGATGTGGATTTCGCANAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTNTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCNAAAAAAAAAAAA ]
[+] EMBL AU082927 [ cnGGTGGCGTTGGCCCCNTGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGNGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_15578#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 808 fasta sequence
[ATCTATATGGATCTGAATTCTGATGCAATCACAAGTATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGC-GGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAG]
[-] EMBL CB643150 [ATCTATATGGATCTGAATTCTGATGCAATCACAAGTATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGC GGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAG]
[-] EMBL CB643149 [ CATAACAGGCATACTTGTCCAGTTTCCATTGCCAAAGCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAAGGGATGCATGGAGCTCCTAACCCGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGTTACCTGTATCCCTGCTTCTTCTGAAGGC GGATGCGACTGTATCCATTGTTCATTCCCGGACCCCAAACCTTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGTTATGATGATCAAAGGAGACTGGATCAATCCAGGCGCTGCTGTCATCCACGTTGGGAGGAACTCCCTCAGTGACCCTCCCAGGAAATCGGGGTACAGACTAGTCGGAGATGTGCATTTGGCAGAGCTGAGCAAGTTTGCTGGTCACCTGTCTCCAGTCCCAGGTG ]
[+] EMBL OSS12916A [ GAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTTCCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATGCACGCCGAA GGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGC GGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTG ]
[+] EMBL BI797819 [ GCAATGAAAGCCAGAGACCCACTGTTCCTACCATGCACGCCGAA GGATGCATGGAGCTCCTAACACGGAGCGGAGTTACCATCAATGGGAAGCGA C GTCGTGGTT GCCGCAGCAACATTGTCGGGCTACCTGTATCCCTGCTTCTTCTGAAGGCAGGATGCGACCGTATCCATTGTTCACTCCCGGACCCCAAACCCTGAAAGTATTGTCCGCGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAA ]
[+] EMBL AU173342 [ CGGACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAGGCTATGATGATCAAAGGAGACTGGATCAAACCAGGCGCTGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAGACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGTCCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGCGAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGTTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCA AAAA ]
[-] EMBL CF301109 [ TTGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAA ]
[+] EMBL CF301110 [ GAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTCGAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15578#0 CCTGCAATTCCAGTCCTCTGTTGCTTGACATCTGGACTGAAAAATTTGTGTGATCTTTTG 60
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 ------------------------------------------------------------
consensus_15578#0 AAGTCTGCTCTTGAATGGATATCGGGATACAGGCATTTGAAGTTGAAAGATTACATAAGA 120
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 ------------------------------------------------------------
consensus_15578#0 TATGTTGCCTAGTTGATTACAGGAGCTTGTCCTTTTGATCTATATCTGCTAAACTTGTAA 180
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 ------------------------------------------CACCT-CGCCGCCCGTCG 17
consensus_15578#0 TTATCTCCTCATGCTATTCGAACAAAGTAGTTCCTATTTTTCTTGCTCATGCTTA-AGGA 239
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 CCGTCGCCCGTCGCCGCC---ACTCACCTCTCACCAACAATCGCGACGACGAAAAGAAAA 74
consensus_15578#0 CTGACTTTATCTGTTTCATATGCAAGATGGATGTTGTAGTAAAAAAATTGGGGCTTAGAA 299
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 AAAAAAAAAAGAATCTCGTCT-CACCCCCAATGGCGCAGATCATCGACGGGAAGGCGGTC 133
consensus_15578#0 GTGGCTTAGATATAATCTATTAGCTTGTCTACAAAAAGTGTGATTTATATTTTCCTAACC 359
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 GCCGCC--GACATCCGCCGCGAGGTCGCCGCCGACGTCGCCGCCCTCTCCTCCGCCCACA 191
consensus_15578#0 ACGTGGATGTCAGGTAAACACAATTAACTCTAGATT-TAATGTCCATTTAATAATGTACA 418
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 ACCTCGTGCCCGGGCTGGCGGTGGTGATCGTGGGGAGCAGGAAGGACTCGCAGACGTACG 251
consensus_15578#0 AGCTAGAGTTAGTCTGAAACAGCACTGTAACTTCAGATTTTGCCTCTGCCTAATGTTGAG 478
consensus_15578#2 ------------------------------------------------------------
consensus_15578#1 TGC-AGATGAAGCGCAAGGC-GTGCGCCGAGGTCGGCATCCGC-TCCGTC-GACGTCGAC 307
consensus_15578#0 GTATTGATTGGAGGTATATGACTACATCTATATGGATCTGAATTCTGATGCAATCACAAG 538
consensus_15578#2 -------------------------ATCTATATGGATCTGAATTCTGATGCAATCACAAG 35
consensus_15578#1 ---CTCGCCGAGGACATCT-------CCGAGGCGGCGCTCGTCGCCGAGGT--CCACCGC 355
* * ** ** * ** * ***
consensus_15578#0 TATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAA 598
consensus_15578#2 TATTTGACAATGAACTTGTGCTGTCATAACAGGCATACTTGTCCAGCTTCCATTGCCAAA 95
consensus_15578#1 C--TCAACGCCGACC-----CAGCCGTCCATGGCATACTTGTCCAGCTTCCATTGCCAAA 408
* ** ** * * * * * *****************************
consensus_15578#0 GCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTT 658
consensus_15578#2 GCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTT 155
consensus_15578#1 GCATATTAATGAGGAAAAGATATTGAACGAGATCAGCTTAGAGAAAGATGTTGATGGGTT 468
************************************************************
consensus_15578#0 CCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATG 718
consensus_15578#2 CCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATG 215
consensus_15578#1 CCATCCTCTGAATATTGGCAAGCTTGCAATGAAAGGCAGAGACCCACTGTTCCTACCATG 528
************************************************************
consensus_15578#0 CACGCCGAAGGTATGGAAACACTACAACAGAATGCTAGAATATGACTGCTGCTGCAGTTT 778
consensus_15578#2 CACGCCGAAGG------------------------------------------------- 226
consensus_15578#1 CACGCCGAAGG------------------------------------------------- 539
***********
consensus_15578#0 TCGTTTGCAGTTTTGATGTTTTGATTTTCATTGAAGGGATGCATGGAGCTCCTAACACGG 838
consensus_15578#2 -------------------------------------GATGCATGGAGCTCCTAACACGG 249
consensus_15578#1 -------------------------------------GATGCATGGAGCTCCTAACACGG 562
***********************
consensus_15578#0 AGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGG 898
consensus_15578#2 AGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGG 309
consensus_15578#1 AGCGGAGTTACCATCAATGGGAAGCGAGCGGTCGTGGTTGGCCGCAGCAACATTGTCGGG 622
************************************************************
consensus_15578#0 CTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGG 958
consensus_15578#2 CTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGG 369
consensus_15578#1 CTACCTGTATCCCTGCTTCTTCTGAAGGCGGATGCGACCGTATCCATTGTTCACTCCCGG 682
************************************************************
consensus_15578#0 ACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAG 1018
consensus_15578#2 ACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAG 429
consensus_15578#1 ACCCCAAACCCTGAAAGTATTGTCCGTGAAGCAGACATTGTCATTGCAGCGGCTGGCCAG 742
************************************************************
consensus_15578#0 GCTATGATGGTACATTGTTCTACCACCAAATTATGACATGGTTCATCACAATCCACTGCC 1078
consensus_15578#2 GCTATGATG--------------------------------------------------- 438
consensus_15578#1 GCTATGATG--------------------------------------------------- 751
*********
consensus_15578#0 CAGTTCTAACTGCAGATTTCTTGGTTGCCAGATCAAAGGAGACTGGATCAAACCAGGCGC 1138
consensus_15578#2 -------------------------------ATCAAAGGAGACTGGATCAAACCAGGCGC 467
consensus_15578#1 -------------------------------ATCAAAGGAGACTGGATCAAACCAGGCGC 780
*****************************
consensus_15578#0 TGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAG 1198
consensus_15578#2 TGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAG 527
consensus_15578#1 TGCTGTCATCGACGTTGGGACGAACTCCATCAGTGACCCAACCAGGAAATCGGGGTACAG 840
************************************************************
consensus_15578#0 ACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGT 1258
consensus_15578#2 ACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGT 587
consensus_15578#1 ACTCGTCGGCGATGTGGATTTCGCAGAGGTGAGCAAGGTTGCTGGTCACCTGACTCCAGT 900
************************************************************
consensus_15578#0 CCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGC 1318
consensus_15578#2 CCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGC 647
consensus_15578#1 CCCAGGTGGCGTTGGCCCCATGACGGTGGCGATGTTGCTGAAGAACACGGTGGATGGAGC 960
************************************************************
consensus_15578#0 GAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGT 1378
consensus_15578#2 GAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGT 707
consensus_15578#1 GAAACGTGGTATAGTTCAGTAAAGTTTCCATCTTGTATGCTGTAACTGCAAGGATGATGT 1020
************************************************************
consensus_15578#0 TGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTC 1438
consensus_15578#2 TGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTC 767
consensus_15578#1 TGTAATTGAGTGCATTTCTGGACAAATTCGTTCTCATTTTTGTTGTGTGACGGTTATTTC 1080
************************************************************
consensus_15578#0 GAGAATAATAAGAATAAG------------------------------------------ 1456
consensus_15578#2 GAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAG------------------- 808
consensus_15578#1 GAGAATAATAAGAATAAGTTTGTCTGTCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1140
******************
consensus_15578#0 -------------
consensus_15578#2 -------------
consensus_15578#1 AAAAAAAAAAAAA 1153
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||