These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 331 fasta sequence [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG-GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC-TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC-TCGCC-TCGGAG-TCCGAAGCCGGGGGCGCGGCGGCCGCAACCGCGGTTGGAGTTCCANTTTTTGTTTC] [+] EMBL AU064991 [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGCTTGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGCTTCGCCTTCGGAGTTCCGAAGCCGNGGGCGCGGCGGCCGCAACCGCGGTTGGAGTTCCANTTTTTGTTTC] [+] EMBL AU064947 [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGNCTTCGCCGCGTCCGGCACCGCCGTGC TCGNC TCGGAG TCCGAAG ] [+] EMBL AU064689 [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGNCATCGCCTTCGCCGCGTCCG CACCGNCGTGC TCGCC TNGGAG TC ] [+] EMBL AU064939 [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGNCGTCCTCGCCATCGCCTTC ] [+] EMBL AU064637 [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAGC ] [+] EMBL AU064745 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCNCTCCCGNCACCGNACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGNCTTCGNCGTACTCNGCATCGGCTTCGCCGCGTNCGGCACCGGCGTGC TCGCC TCGGAG TNCGAAGCC ] [+] EMBL AU166246 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGGCACCGCCGTGC TCGCC TCGGAGTTCCGAAGC ] [+] EMBL AU064643 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAGC ] [+] EMBL AU064581 [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGNCGTGC TCGCC TCGGAG TCCGAAG ] [+] EMBL AU064569 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG ] [+] EMBL AU064666 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGC TCGCC TCGGAG TNCGAAG ] [+] EMBL AU064921 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG ] [+] EMBL AU064742 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGGCATCGCCTTCGCCGCGTCCGGCACCGACGTGC TCGCC TCGGAG TNCGAAG ] [+] EMBL AU064769 [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGCTTCGCC TCGGAG T ] [+] EMBL AU064878 [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGCTTCGCC TCGGAG TNCGAAGCCGGGGGCGCGGCGGCCGCAA CGCGG ] [+] EMBL AU065043 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG ] [+] EMBL AU064596 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGGNGAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGNCGTCCTCGGCATCGNCTTCGgc ] [+] EMBL AU065049 [tAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGNCTTC ] [+] EMBL AU064156 [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTAATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGCCGTGC TCGCC TCGGAG TCCGAAGCCGGGGGCG ] [+] EMBL AU064959 [ AGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGNCATCGCCTTCGCCGCGTCCGCCACCGNCGTGC TCGCC TCGGAG TCCGAAG ] [+] EMBL AU064145 [ GAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCG CACCG CGTGC TCGCC TCGGAG TCCGAAGC ] [+] EMBL AU064795 [ GCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGC TCGCC TCGGAG TCCGAAG ] [+] EMBL C99009 [ CCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||