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Oryza sativa
cluster # 15590 cluster # 15590       Sequences # 23       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15590#0 length = 331 sequences # 23  

consensusID : consensus_15590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 331
fasta sequence
                              [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG-GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC-TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC-TCGCC-TCGGAG-TCCGAAGCCGGGGGCGCGGCGGCCGCAACCGCGGTTGGAGTTCCANTTTTTGTTTC]

[+] EMBL AU064991             [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGCTTGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGCTTCGCCTTCGGAGTTCCGAAGCCGNGGGCGCGGCGGCCGCAACCGCGGTTGGAGTTCCANTTTTTGTTTC]
[+] EMBL AU064947             [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGNCTTCGCCGCGTCCGGCACCGCCGTGC TCGNC TCGGAG TCCGAAG                                                 ]
[+] EMBL AU064689             [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGNCATCGCCTTCGCCGCGTCCG CACCGNCGTGC TCGCC TNGGAG TC                                                      ]
[+] EMBL AU064939             [NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGNCGTCCTCGCCATCGCCTTC                                                                                            ]
[+] EMBL AU064637             [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAGC                                                ]
[+] EMBL AU064745             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCNCTCCCGNCACCGNACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGNCTTCGNCGTACTCNGCATCGGCTTCGCCGCGTNCGGCACCGGCGTGC TCGCC TCGGAG TNCGAAGCC                                               ]
[+] EMBL AU166246             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGGCACCGCCGTGC TCGCC TCGGAGTTCCGAAGC                                                ]
[+] EMBL AU064643             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAGC                                                ]
[+] EMBL AU064581             [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGNCGTGC TCGCC TCGGAG TCCGAAG                                                 ]
[+] EMBL AU064569             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG                                                 ]
[+] EMBL AU064666             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGC TCGCC TCGGAG TNCGAAG                                                 ]
[+] EMBL AU064921             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG                                                 ]
[+] EMBL AU064742             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGGCATCGCCTTCGCCGCGTCCGGCACCGACGTGC TCGCC TCGGAG TNCGAAG                                                 ]
[+] EMBL AU064769             [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGCTTCGCC TCGGAG T                                                       ]
[+] EMBL AU064878             [gAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGCTTCGCC TCGGAG TNCGAAGCCGGGGGCGCGGCGGCCGCAA CGCGG                      ]
[+] EMBL AU065043             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG                                                         ]
[+] EMBL AU064596             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGGNGAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGNCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGNCGTCCTCGGCATCGNCTTCGgc                                                                                         ]
[+] EMBL AU065049             [tAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGNCTTC                                                                                            ]
[+] EMBL AU064156             [ AAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTAATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGCCGTGC TCGCC TCGGAG TCCGAAGCCGGGGGCG                                        ]
[+] EMBL AU064959             [  AGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGNCATCGCCTTCGCCGCGTCCGCCACCGNCGTGC TCGCC TCGGAG TCCGAAG                                                 ]
[+] EMBL AU064145             [   GAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCG CACCG CGTGC TCGCC TCGGAG TCCGAAGC                                                ]
[+] EMBL AU064795             [          GCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGNCACCGNCGTGC TCGCC TCGGAG TCCGAAG                                                 ]
[+] EMBL C99009               [               CCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATAATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGG GAGCTCGTCGGAGAAGAAGAAGAAGACCAAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCGGC TGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCTTCGCCGCGTCCGCCACCGCCGTGC TCGCC TCGGAG TCCGAAG                                                 ]


>consensus_15590#0 NAAGAGATTGGCCACCCGCCTCTCGATTCGCTCCCCAATAATCCAGAGCTACCACTAATA ATCCCCCTCCGTTCCAGCGCGCGCGGCGGCGGGAGCTCGTCGGAGAAGAAGAAGAAGACC AAACCAGGCCGGCCGGTCGTCGTCGTCGTCGTCGATCCCCTCCCGCCACCGCACCCGCCG GCTGTGATACTATGGAGATGAAGAAGATCGCCGTCGCCTTCGCCGTCCTCGCCATCGCCT TCGCCGCGTCCGCCACCGCCGTGCTCGCCTCGGAGTCCGAAGCCGGGGGCGCGGCGGCCG CAACCGCGGTTGGAGTTCCANTTTTTGTTTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)