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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15595#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1550 fasta sequence
[GAGATCCTTACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGG-CTGACAG-TGCTAACAAAGGTATATTCTCCTTGTCACCTGTATAGTTAACTTGGAGAGAAAGACTGGTACTACTTGCTTCATGCTCCAAGTATGTTATTAGCACTTATTTCATAACTGAACATTCTTCTGGTATTAGCTGTTTGGGCCAGTTCGAATGCTAGATCTTTCTCAACTCCTTGAACTGCTTATCCCTTTGGCTCAGTCCCCTGAAACTTTGCTGATTCATGAGGTTCCTCAGAGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATGTCCATGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAAGCAATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATATAAAATTGATTGAATGATGGTTGGAAATAGTAAATATGATATGATATCTTGATTGTATTATTGTCCAATTGACTACCTGATTAATATATAGCATTTAGATAG-GGTGGTGATTAAT-GGCGTTGTTTAATTGGTGAAGGAAGT-GGAGGGGACTTTTATCTAACGGCTAATACTGGAAAGACTTGTCAATCCAACGGTTGAAACTATTTTGATGACGTGGCTAAACGTGGTGCCTG-TTTGTGGTCTCACTTATATAGAAAGCATAGATTACCAATATGGTTTTCTTTGAGCAACAATAGTAAGTTTGACCTGTCTGTATCCTGCATGTCACTTTCTTTATTGAATAAATGCTGTAACTCTGACTTTTTGCATGTAATCTGTATGTTTATGGGCAACAACTTTTCCAATGGCATTCCTTTTGACATTCCACATCATGTTGGATGCAGCATGTTGATTCTAATGCAGGACTGCCAGTCTTAGCAGTTGATTCAATGAATTGCCAGTCTTAGCAGTTGATTCAATGAATTGTTGTTATAGTCTGGGTCAGTCAACGTACCATTTTGTCTATGCAATACCATTTCAAACTAGACTAGTTAACCAATGTTATGTAAAACTCTTGTGAAACATCTGATCTGATTTAGCCAACATGAGCATAGTAAACTGAACTTTCCAGGGATCTTAATTTCTCATAACAAGAACTCTGTATATTCAACTTAGTGAATTCGCCGAGAGGCAATTACCGAACTAACTTTATGCTTCTGCAATCTGCAGATGATGAAGACATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATACCTGAGAGTTTTAGAAC-GCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACGGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGCAAAGCTATCCAGCCATTCTGTGTTTCAAAAAA]
[+] EMBL CB672777 [GAGATCCTTACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGG CTGACAG TGCTAACAAAGGTATATTCTCCTTGTCACCTGTATAGTTAACTTGGAGAGAAAGACTGGTACTACTTGCTTCATGCTCCAAGTATGTTATTAGCACTTATTTCATAACTGAACATTCTTCTGGTATTAGCTGTTTGGGCCAGTTCGAATGCTAGATCTTTCTCAACTCCTTGAACTGCTTATCCCTTTGGCTCAGTCCCCTGAAACTTTGCTGATTCATGAGGTTCCTCAGAGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATGTCCATGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAAGCAATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATATAAAATTGATTGAATGATGGTTGGAAATAGTAAATATGATATGATATCTTGATTGTATTATTGTCCAATTGACTACCTGATTAATATATAGCATTTAGATAG GGTGGTGATTAAT GGCGTTGTTTAATTGGTG AGGAAGT GGAGGGGACTTTTATCTAACGGCTAATACTGGAAAGACTTGTCAATCCAACGGTTGAAACTATTTTGATGACGTGGCTAAACGTGGTGCCTG TTTGTGGTCTCACTTATATAGAAAGCATAGATTACCAATATGGTTTTCTTT ]
[+] EMBL CB672775 [gtGATCTGTACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGACTGACAGCTGCTAACAAAGGTATATTCTCCTTGTCACCTGTATAGTTAACTTGGACAGAAAGACTGGTACTACTTGCTTCATGCTCCAAGGATGTTATTAGCACTTATTTCATAACTGAACATTCTTCTGGTATTAGCTGTGTGGGCCAGTTCGAATGCTATATCTTTCTCAACTCCTTGAACTGCTTATCCCTTTGGCTCAGTCCCCTGAAACTTTGCTGATTCATGAGGTTCCTCAGAGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATGTCCCTGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAATCAATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATATAAAATTGATTGACTGATGGTTGGAAATAGTAAATATGATATGATATCTAGATTGTATTATTGTCCAAATGACTACCTGATTAATATATAGCA ]
[+] EMBL CF328655 [ CTACTTGCTTCATGCTCCAAGTATGTTATTAGCACTTATTTCATAACTGAACATTCTTCTGGTATTAGCTGTTTGGGCCAGTTCGAATGCTAGATCTTTCTCAACTCCTTGAACTGCTTATCCCTTTGGCTCAGTCCCCTGAAACTTTGCTGATTCATGAGGTTCCTCAGAGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATGTCCATGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAAGCAATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATATAAAATTGATTGAATGATGGTTGGAAATAGTAAATATGATATGATATCTTGATTGTATTATTGTCCAATTGACTACCTGATTAATATATAGCATTTA ATAGNGGTGGTGA TAATGGGCGTTGTTTAATTGG GAAGGAAGTGGGAGGGGACTTTTATCTAACGGCTAATACTGGAAAGACTTGTCAATCCAACGGTTGAAACTATTTTGATGACGTGGCTAAACGTGGTGCCTGTTTTGTGGTCTCACTTATATAG ]
[+] EMBL CA753846 [ AGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATGTCCATGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAAGCAATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATATAAAATTGATTGAATGATGGTTGGAAATAGTAAATATGATATGATATCTTGATTGTATTATTGTCCAATTGACTACCTGATTAATATATAGCATTTAGATAG GGTGGTGATTAAT GGCGTTGTTTAATTGGTGAGGAAAGT GNAGGGGACTTTTATCTAACGGCTAATACTGGAAAGACTTGTCAATCCAACGGTTGAAACTATTTTGATGACGTGGCTAAACGTGGTGCCTG TTTGTGGTCTCACTTATATAGAAAGCATAGATTACCAATATGGTTTTCTTTGAGCAACAATAGTAAGTTTGACCTGTCTGTATCCTGCATGTCACTTTCTTTATTGAATAAATGCTGTAACTCTGACTTTTTGCATGTAATCTGTATGTTTATGGGCAACAACTTTTCCAATGGCATTCCTTTTGACATTCCACATCATGTTGGATGCAGCATGGTGATTCT ]
[-] EMBL CB672776 [ CATAGATTACCAATATGGTTTTCTTTGAGCAACAATAGTAAGTTTGACCTGTCTGTATCCTGCATGTCACTTTCTTTATTGAATAAATGCTGTAACTCTGACTTTTTGCATGTAATCTGTATGTTTATGGGCAACAACTTTTCCAATGGCATTCCTTTTGACATTCCACATCATGTTGGATGCAGCATGTTGATTCTAATGCAGGACTGCCAGTCTTAGCAGTTGATTCAATGAATTGCCAGTCTTAGCAGTTGATTCAATGAATTGTTGTTATAGTCTGGGTCAGTCAACGTACCATTTTGTCTATGCAATACCATTTCAAACTAGACTAGTTAACCAATGTTATGTAAAACTCTTGTGAAACATCTGATCTGATTTAGCCAACATGAGCATAGTAAACTGAACTTTCCAGGGATCTTAATTTCTCATAACAAGACCTCTGTATATTCAACTTAGTGAATTCGCCGAGAGGCAATTACCGAACTAACTTTATGCTTCTGCAATCTGCAGATGATGAAGACATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATACCTGAGAGTTTTAGAAC GCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTT ]
[-] EMBL CB672778 [ CATAGATTACCAATATGGTTTTCTTTGAGCAACAATAGTAAGTTTGACCTGTCTGTATCGTGCATGTCACTTTCTTTATTGAATAAATGCTGTAACTCTGACTTTTTGCATGTAATCTGTATGTTTATGGGCAACAACTTTTCCAATGGCATTCCTTTTGACATTCCACATCATGTTGGATGCAGCATGTTGATTCTAATGCAGGACTGCCAGTCTTAGCAGTTGATTCAATGAATTGCCAGTCTTAGCAGTTGATTCAATGAATTGTTGTTATAGTCTGGGTCAGTCAACGTACCATTTTGTCTATGCAATACCATTTCAAACTAGACTAGTTAACCAATGTTATGTAAAACTCTTGTGAAACATCTGATCTGATTTAGCCAACATGAGCATAGTAAACTGAACTTTCCAGGGATCTTAATTTCTCATAACAAGAACTCTGTATATTCAACTTAGTGAATTCGCCGAGAGGCAATTACCGAACTAACTTTATGCTTCTGCAATCTGCAGATGATGAAGACATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATACCTGAGAGTTTTAGAAC GCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACGGTTCTGTTATGTGAATCGCCAT ]
[-] EMBL CF328654 [ CAATGAATTGCCAGTCTTAGCAGTTGATTCAATGAATTGTTGTTATAGTCTGGGTCAGTCAACGTACCATTTTGTCTATGCAATACCATTTCAAACTAGACTAGTTAACCAATGTTATGTAAAACTCTTGTGAAACATCTGATCTGATTTAGCCAACATGAGCATAGTAAACTGAACTTTCCAGGGATCTTAATTTCTCATAACAAGAACTCTGTATATTCAACTTAGTGAATTCGCCGAGAGGCAATTACCGAACTAACTTTATGCTTCTGCAATCTGCAGATGATGAAGACATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATACCTGAGAGTTTTAGAAC GCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGCAAAGCTATCCAGCCATTCTGTGTTTCAAAAAA]
[-] EMBL AA750347 [ gGAAATACCTGAGAGTTTTAGAACAGCTATGCTTGACTTGTTTGTGACGCTGCCNGG CTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTTTAGTAGCTC ]
consensusID : consensus_15595#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1146 fasta sequence
[GAGTAGAAAATCTAGAGCATTTCGGAAGCCGCTAACCCAAGTATCCCACCGGGGACGAATTTACGGATTTGCCCTCCACCTTCTCCCTCCCCCTCGCGGCGCCGCTTCTTATACCCTTCCTCCTCCTCCGGCGTCGTCCCCGAGGTCTTCTAAAAAAAACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG-ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA-GAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAG-CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA-TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGCAAAGCTATCCAGCCA-TTCTGTGTTTCATACTTTTACTCATAGCGGTTTGGTGGCATGTTCCATTTGCCTTGTACTTTGGAACTTGCATAATTGTTCGTGACTGTAAAAATAAACTGAAGTATCCAGCTTGCTCAATCCATATTGTTAAAAAAAAAA]
[+] EMBL CF316679 [GAGTAGAAAATCTAGAGCATTTCGGAAGCCGCTAACCCAAGTATCCCACCGGGGACGAATTTACGGATTTGCCCTCCACCTTCTCCCTCCCCCTCGCGGCGCCGCTTCTTATACCCTTCCTCCTCCTCCGGCGTCGTCCCCGAGGTCTTCTAAAAAAAACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCA GTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAA ]
[+] EMBL AK068105 [ ATCTAGAGCATTTCGGAAGCCGCTAACCCAAGTATCCCACCGGGGACGAATTTACGGATTTGCCCTCCACCTTCTCCCTCCCCCTCGCGGCGCCGCTTCTTATACCCTTCCTCCTCCTCCGGCGTCGTCCCCGAGGTCTTCTAAAAAAAACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA GAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCAAAG CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGCAAAGCTATCCAGCCA TTCTGTGTTTCATACTTTTACTCATAGCGGTTTGGTGGCATGTTCCATTTGCCTTGTACTTTGGAACTTGCATAATTGTTCGTGACTGTAAAAATAAACTGAAGTATCCAGCTTGCTCAATCCATAT ]
[+] EMBL CF317859 [ CATTTCGGAAGCCGCTAACCCAAGTATCCCACCGGGGACGAATTTACGGATTTGCCCTCCACCTTCTCCCTCCCCCTCGCGGCGCCGCTTCTTATACCCTTCCTCCTCCTCCGGCGTCGTCCCCGAGGTCTTCTAAAAAAAACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCA GTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCCGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGG ]
[+] EMBL CF310990 [ CTAAAAAAAACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGA ]
[+] EMBL OSS14476A [ AACCCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGNCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGNCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGNCGAAGGGCCCTGTCGACGACACCCNTTATGAG TTGATCTTGAGCTCTTTGATGC ]
[+] EMBL OSS0965A [ CCTAATCCATCCACTCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGNGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGC ]
[+] EMBL AU058268 [ GCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGCGCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGCACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGGGATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAA GGCCCTGCCGACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGCTGTGAATGTTGAGGAGAGCAAGGCAGCTGTTGCGGCAAGGTCCATATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGA ]
[+] EMBL BI808465 [ TTGA GAGA CA GCA CTGTT CGCCA GTCCATATGCTATCTTATC AG AACCAGAGAGCAAGTGTTG CTA GCTGCTGAAGAAGGAA GCAA CCACCTGTGGTCCTCAA GTTGATTGGGAATAAGTGCCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAA CTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGAC CGGCTGAC GTGCTAACCAAGATGATGAAGAC TTAA GCACGA GGGACCGGGGAAC CTGCT GTGAAGCGAAC CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCACTTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATC ACCCTTGC AAGCTATCCAGCCACTTCTGTGTTTCATACTTTTACTCATAGCGGTTTGGTGGCATGTTCCATTTGCCTTGTACTTTGGAACTTGCATAATTGTTCGTGACTGTAAAAATAAACTGAAGTATCCAGCTTGCTC ATCCATATTGTTAAAAAAAAAA]
[+] EMBL BQ906090 [ ATGCTATCTTATCAAGAAAGCAGAGAGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAAGGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA GAGGGGAGCGG GGAAGCTGCTGGTGAAGCGAAG CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGC AAGCTATCCAGCCA TTCTGTGTTTCAaaaa ]
[+] EMBL AU161586 [ tCAAGTGGTGGCCTAGGCTGCTGAAGAAGGAANGCAAGCCACCTGTGTTCCTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA GAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAG CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAAa ]
[-] EMBL CF297566 [ CTCAAGGTTGATTGGG ATAAGTGGCAAGATGAGGATGATGAAGACATTGGGCTTGGTGACTTCGGTGATATGGACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA GAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAG CCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAAaaaa ]
[+] EMBL AU091973 [ GAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAAAGATGATGAAGACATTAAGGCA GAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCCGTGAAATACCTGAGAGTTTTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCA TTGCACACTGTTCTGTTATGTGAATCGCCATATTTGCATCAACCATTGCAAAGCTATCCAGCCA TTCTGTGTTTCATACTTTTACTCATAGCGGTTTGGTGGCATGTTCCATTTGCCTTGTACTTTGGAACTTGCATAATTGTTCGTGACTGTAAAAATAAACTGAAaaaaaa ]
consensusID : consensus_15595#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 308 fasta sequence
[AAAGATGATGAAGCCTTTAAGGCAGAGGGAAGCGGGGAACAGGAAGTTGTTGGTAAAGCGAACCCGTGAAATCCTTGAGAGTTTTAGAACGTTATGCTTGACTTGTTTGTGACGCTGCCAGGTTTTAAGATTTTTTTGGTGTAAATTTTGGAGAGTGGATCCCTGCCATTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTTTGTTATGTGAATCCCCATATTGGCATCACCCATTGCAAAGCTATCCAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF337312 [AAAGATGATGAAGCCTTTAAGGCAGAGGGAAGCGGGGAACAGGAAGTTGTTGGTAAAGCGAACCCGTGAAATCCTTGAGAGTTTTAGAACGTTATGCTTGACTTGTTTGTGACGCTGCCAGGTTTTAAGATTTTTTTGGTGTAAATTTTGGAGAGTGGATCCCTGCCATTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTTTGTTATGTGAATCCCCATATTGGCATCACCCATTGCAAAGCTATCCAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF316678 [ AAGATGATGAAGCCTTTAAGGCAGAGGGAAGCGGGGAACAGGAAGCTGTTGGTAAAGCGAACCCGTGAAATCCTTGAGAGTTTTAGAACGTTATGCTTGACTTGTTTGTGACGCTGCCAGGTTTTAAGATTTTTTTGGTGTAAACTTTGGAGAGTGGATCCCTGCCCCTAAAGTAAAGTAGTAGTTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCCCACTGTTTTGTTATGTGAATCCCCATATTTGCATCACCCATTGCAAAGTTATCCAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15595#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence
[AGGATGGCNCNTTNGAAAAAACCAAAGAGCCAANGGCCCCNAGCGCGCAAAGGNANCGTTNGNAANCTGCCGGTGAANCGAAGCCGTGAAATACCTGAGAGTCCNTAGAACGCTANNCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTCTGTTATGTGAATCGCCATA]
[+] EMBL AA754521 [AGGATGGCNCNTTNGAAAAAACCAAAGAGCCAANGGCCCCNAGCGCGCAAAGGNANCGTTNGNAANCTGCCGGTGAANCGAAGCCGTGAAATACCTGAGAGTCCNTAGAACGCTANNCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTTTTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTTTAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTCTGTTATGTGAATCGCCATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15595#0 GAGATCCTTACTTCTCGAAGCTGGGCATGGGAGGTCCTGATGATGATCTTGAGGACGATG 60
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 ACGAAGATGACACGGCTGACAGTGCTAACAAAGGTATATTCTCCTTGTCACCTGTATAGT 120
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TAACTTGGAGAGAAAGACTGGTACTACTTGCTTCATGCTCCAAGTATGTTATTAGCACTT 180
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 ATTTCATAACTGAACATTCTTCTGGTATTAGCTGTTTGGGCCAGTTCGAATGCTAGATCT 240
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TTCTCAACTCCTTGAACTGCTTATCCCTTTGGCTCAGTCCCCTGAAACTTTGCTGATTCA 300
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TGAGGTTCCTCAGAGTAGCCTTTACATCATCATTTGTTTTTAATTTGTCATGATTTCATG 360
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TCCATGGTCATTATTACAACTTGGTGATTCCCCGTGCTTTGCTGCGGAAATTACTAAGCA 420
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 ATTCTCAAGAAAATATCTACTTTCTTGTATATACATATATTTCTATTAGTATATGTATAT 480
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ------------------------------------------------------------
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 AAAATTGATTGAATGATGGTTGGAAATAGTAAATATGATATGATATCTTGATTGTATTAT 540
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ----------------GAGTAGAAAATCTAGAGCATTTCGGAAGCCGCTAACCCAAGTAT 44
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TGTCCAATTGACTACCTGATTAATATATAGCATTTAGATAGGGTGGTGATTAATGGCGTT 600
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 CCCACCGGGGACGAATTTACGGATTTGCC-CTCCACCTTCTCCCTCCCCCTCGCGGCGCC 103
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 GTTTAAT-TGGTGAAGGAAGTGGAGGGGACTTTTATCTAACGGCTAATACTGGAAAGACT 659
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GCTTCTTATACCCTTCCTCCTCCTCCGGCGTCGTCCCCGAGGTCTTCTAAAAAAAACCCT 163
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TGTCAATCCAACGGTTGAAACTATTTTGATGACGTGGCTAAACGTGGTGCCTGTTTGTGG 719
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 AATCCATCCAC---TCCAAATCGCCACGCAGGAAGGGAGGAAAGGACCACCAGCCACCGC 220
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TCTCACTTATATAGAAAGCATAGATTACCAATATGGTTTTCTTTGAGCAACAATAGTAAG 779
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GCGCGCCCAAATCGTCGCAGCTGCTTCCCCGAGGAGAAGAACATGAGTCGCCACCCGAGC 280
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TTTGACCTGTC-TGTATCCTGCATGTCACTTTCTTTATTGAATAAATGCTGTAACTCTGA 838
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ACTAAGTGGGCGCAGAGGTCCGACAAGGTGTTCTTGACGATCGAGCTGCCCGATGCCAGG 340
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 CTTTTTGCATGTAATCTGTATGTTTATGGGCAACAACTTTTCCAATGGCATTCCTTTTGA 898
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GATGTGAAGCTCAACCTGAAGCCTGAGGGCCAGTTCATCTTCTCGGCGAAGGGCCCTGCC 400
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 CATTCCACATCATGTTGGATGCAGCATGTTGATTCTAATGCAGGACTGCCAGTCTTAGCA 958
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GACGACACCCCTTATGAGCTTGATCTTGAGCTCTTTGATGC-----TGTGAATGTTG--A 453
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 GTTGATTCAATGAATTGCCAGTCTTAGCAGTTGATTCAATGAATTGTTGTTATAGTCTGG 1018
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GGAGAGCAAGGCAGCTGTTGCGGCAAG--GTCCATATGCTATCTTATCAAGAAAGCAGAG 511
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 GTCAGTCAACGTACCATTTTGTCTATGCAATACCATTTCAAACTAGACTAGTTAACCAAT 1078
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 AGCAAGTGGTGGCCTAGGCTGCTGAAGAAGGA------------AGGCAAGCCA-CCTGT 558
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 GTTATGTAAAACTCTTGTGAAACATCTGATCTGATTTAGCCAACATGAGCATAGTAAACT 1138
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GTTCCTCAAGGTTGAT-TGGGATAAGTGGCAAGATGAGGATGATGAAGACATTG-GGCTT 616
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 GAACTTTCCAGGGATCTTAATTTCTCATAACAAGAACTCTGTATATTCAACTTAGTGAAT 1198
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 GGTGACTTCGGTGATATGGACTTCTCG------AAGCTGGGCATGGGAGGTCCTGATGAT 670
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 TCGCCGAGAGGCAATTACCGAACTAACTTTA-TGCTTCTGCAATCTGCAGATGATGAAGA 1257
consensus_15595#3 ------------------------AGGATGG-CNCNTTNGAAAAAACCAAAGAGCCAANG 35
consensus_15595#1 GATCTTGAGGACGATGACGAAGATGACACGGCTGACAGTGCTAACAA-AGATGATGAAGA 729
consensus_15595#2 ---------------------------------------------AA-AGATGATGAAGC 14
* * **
consensus_15595#0 CATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATAC 1317
consensus_15595#3 GCCCCNAGC-GCGCAAAGGNANCGTTNGNAANCTGCCGGTGAANCGAAGCCGTGAAATAC 94
consensus_15595#1 CATTAAGGCAGAGGGGAGCGGGGAACAGGAAGCTGCTGGTGAAGCGAAGCCGTGAAATAC 789
consensus_15595#2 CTTTAAGGCAGAGGGAAGCGGGGAACAGGAAGTTGTTGGTAAAGCGAACCCGTGAAATCC 74
** * * ** * ** ** *** ** **** ********* *
consensus_15595#0 CTGAGAGTT-TTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTT 1376
consensus_15595#3 CTGAGAGTCCNTAGAACGCTANNCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTT 154
consensus_15595#1 CTGAGAGTT-TTAGAACGCTATGCTTGACTTGTTTGTGACGCTGCCAGGTCTTAAGATTT 848
consensus_15595#2 TTGAGAGTT-TTAGAACGTTATGCTTGACTTGTTTGTGACGCTGCCAGGTTTTAAGATTT 133
******* ******* ** *************************** *********
consensus_15595#0 TTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTT 1436
consensus_15595#3 TTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAATTATGGTT 214
consensus_15595#1 TTTTGGTGTAAACTCTGGAGAGTGGATCACTGCCACTAAAGTAAAGTAGTAGTTATGGTT 908
consensus_15595#2 TTTTGGTGTAAATTTTGGAGAGTGGATCCCTGCCATTAAAGTAAAGTAGTAGTTATGGTT 193
************ * ************* ****** *************** ********
consensus_15595#0 TAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACGGTTCTGTTATGTGAATCG 1496
consensus_15595#3 TAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTCTGTTATGTGAATCG 274
consensus_15595#1 TAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTCTGTTATGTGAATCG 968
consensus_15595#2 TAGTAGCTCCATTTTGTTAAAAAACTTTGTGCATTGCACACTGTTTTGTTATGTGAATCC 253
***************************************** *** *************
consensus_15595#0 CCATATTTGCATCAACCATTGCAAAGCTATCCAGCCATTCTGTGTTTCAAAAAA------ 1550
consensus_15595#3 CCATA------------------------------------------------------- 279
consensus_15595#1 CCATATTTGCATCAACCATTGCAAAGCTATCCAGCCATTCTGTGTTTCATACTTTTACTC 1028
consensus_15595#2 CCATATTGGCATCACCCATTGCAAAGCTATCCAAAAAAAAAAAAAAAAAAAAAAA----- 308
*****
consensus_15595#0 ------------------------------------------------------------
consensus_15595#3 ------------------------------------------------------------
consensus_15595#1 ATAGCGGTTTGGTGGCATGTTCCATTTGCCTTGTACTTTGGAACTTGCATAATTGTTCGT 1088
consensus_15595#2 ------------------------------------------------------------
consensus_15595#0 ----------------------------------------------------------
consensus_15595#3 ----------------------------------------------------------
consensus_15595#1 GACTGTAAAAATAAACTGAAGTATCCAGCTTGCTCAATCCATATTGTTAAAAAAAAAA 1146
consensus_15595#2 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||