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Oryza sativa
cluster # 15598 cluster # 15598       Sequences # 23       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15598#0 length = 675 sequences # 20  
consensus_15598#1 length = 428 sequences # 3  

consensusID : consensus_15598#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 675
fasta sequence
                              [TGACTGGACTGAAGGAGTAGAAACAATTCCCCATTCGCGATTCAGAAGAAGAGTTCTCCTAGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT-GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC-TGTGAATGCTCAAAAGAACATGGTCTGATTGCACAATTGAAATACTGCTTATTTGACAAAAAAA]

[+] EMBL CF314059             [TGACTGGACTGAAGGAGTAGAAACAATTCCCCATTCGCGATTCAGAAGAAGAGTTCTCCTAGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCGCGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGTGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGTGGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAaaaa                                                                      ]
[+] EMBL AK070498             [                                        TTCAGAAGAAGAGTTCTCCTAGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCGCGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC T                                                               ]
[+] EMBL CB096434             [                                           AGAAGAAGAGTTCTCCTAGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTAAATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGAACATGGTCTGATTGCACAATTGAAATACTGCTTATT           ]
[+] EMBL CA758697             [                                                         CCTAGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATG                                                                  ]
[+] EMBL AI978346             [                                                                  AGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGNNGTNCAGCAGCGGCGAACGNNNCAAACAACAGTGnnaa                                                                                                                                                                                                                                                        ]
[-] EMBL BI305758             [                                                                        CAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGAACATGGTC                                       ]
[+] EMBL CF276488             [                                                                        CAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCGCGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTT                                                                                                                                                              ]
[-] EMBL BU673406             [                                                                                 GGCAAGGCGAGCATCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGAACATGGTC                                       ]
[-] EMBL CB965315             [                                                                                 GGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCTAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCCGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGAACATGGTCT                                      ]
[+] EMBL BE039675             [                                                                                    AAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCGATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATG                                                                  ]
[+] EMBL BI305685             [                                                                                                                        gaatGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTT                                                                                ]
[-] EMBL CF314060             [                                                                                                                                  ATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGTGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAaaaaa                                                                     ]
[+] EMBL CB966719             [                                                                                                                                       TTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGC                                                                                         ]
[+] EMBL BU673268             [                                                                                                                                       TTG CTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAACGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGC                                                                                         ]
[+] EMBL OS1470A              [                                                                                                                                                                                                          CTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTNGG ACACTGCTAACTG ATGCTAGCAATCGTAAAC                                                                                            ]
[+] EMBL OSS13539A            [                                                                                                                                                                                                                                gaCTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACA                                                                                     ]
[-] EMBL AI978347             [                                                                                                                                                                                                                                                                                                    aagnnnAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCNNNGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATT                                                                           ]
[+] EMBL OSS11590A            [                                                                                                                                                                                                                                                                                                                                                                                              GATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACANTGTTAATGTTTGTGACCNTAGCTATTACGAAATAATTGTTATATGAATNAATATACTCCCCACATATGTTTGGGCAGTGATTGNTGATTCCCCCTTNCATCATGTACCAAANCGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACANCTTTCCATTACTCTGATGCTTGTNNATGCTCANAAGGACATGGTCTGATTGCACATTTGGAATAC                   ]
[-] EMBL OS16257              [                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTAATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGA                                               ]
[-] EMBL CF276487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGT GGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTACTCTGATGC TGTGAATGCTCAAAAGAACATGGTCTGATTGCACAATTGAAATACTGCTTATTTGACAAAAAAA]


>consensus_15598#0 TGACTGGACTGAAGGAGTAGAAACAATTCCCCATTCGCGATTCAGAAGAAGAGTTCTCCT AGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCG ATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAA CGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGA ATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAA TGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTAC CACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAA CAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACT CCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTG GTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCAT TACTCTGATGCTGTGAATGCTCAAAAGAACATGGTCTGATTGCACAATTGAAATACTGCT TATTTGACAAAAAAA



consensusID : consensus_15598#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 428
fasta sequence
                              [CCGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAACTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAAAAAAAAAAAAAAAAAA]

[+] EMBL C98297               [CCGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAACTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101773             [                                   ACTATTTGGATGGGAATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAACTGCGGCAAAGAACAATGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTNCNTCATGTACCAAAACGTTGGTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAAAAAA            ]
[+] EMBL AU076090             [                                                                                                                                AAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCC                     ]


>consensus_15598#1 CCGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGAATACAGGAGG CCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAACTGCGGCAAAGAACAATGAAGGTGCAA GTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTACCACAGCAGAAG ATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAACAGTGTTAATG TTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACTCCCCACATATG TTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTGGTGGTAGTGGG CACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCATTAAAAAAAAAA AAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15598#0      TGACTGGACTGAAGGAGTAGAAACAATTCCCCATTCGCGATTCAGAAGAAGAGTTCTCCT 60
consensus_15598#1      ------------------------------------------------------------
                                                                                   

consensus_15598#0      AGTTCCAGCTTCCAAGTCAAGGGCAAGGCGAGCAGCCAGCCATCCCACGAAGGCGACTCG 120
consensus_15598#1      ------------------------------------------------------------
                                                                                   

consensus_15598#0      ATCCGGCGACATGGTTTGCCTCGCGTGCTTGCTTCCCCTCTTCTTGATCCCCGTCGTCAA 180
consensus_15598#1      ------------------------------------------------------------
                                                                                   

consensus_15598#0      CGCCCTCCCCTTGCTCTTCCACCTCATCCTCAGCAAGATTTATCGGCTATTTGGATGGGA 240
consensus_15598#1      ----------CCGCTCTTCCACCTCATCCTCAGCAAGATTTATCGACTATTTGGATGGGA 50
                                   ********************************* **************

consensus_15598#0      ATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAGCCTGCGGCAAAGAACAA 300
consensus_15598#1      ATACAGGAGGCCTGAAAGAGCCCCGCCTGCTTGCCCGTTTAAAC-TGCGGCAAAGAACAA 109
                       ****************************************** * ***************

consensus_15598#0      TGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTAC 360
consensus_15598#1      TGAAGGTGCAAGTGAATCAAAACCTCTAGTTGAACCCCAAAGCGCTAGTACTACTACTAC 169
                       ************************************************************

consensus_15598#0      CACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCCAGCAGCGGCGAACGTTTCAAACAA 420
consensus_15598#1      CACAGCAGAAGATAAGAAAGAGGATTAATGTTGTCGAGCAGCGGCGAACGTTTCAAACAA 229
                       *********************************** ************************

consensus_15598#0      CAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACT 480
consensus_15598#1      CAGTGTTAATGTTTGTGACCGTAGCTATTAAGAAATAATTGTTATATGAATGAATATACT 289
                       ************************************************************

consensus_15598#0      CCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTG 540
consensus_15598#1      CCCCACATATGTTTGGGCAGTGATTGTTGATTCCCCCTTCCATCATGTACCAAAACGTTG 349
                       ************************************************************

consensus_15598#0      GTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCAT 600
consensus_15598#1      GTGGTAGTGGGCACACTGCTAACTGCATGCTAGCAATCGTAAACTGCTACACCTTTCCAT 409
                       ************************************************************

consensus_15598#0      TACTCTGATGCTGTGAATGCTCAAAAGAACATGGTCTGATTGCACAATTGAAATACTGCT 660
consensus_15598#1      TAAAAAAAAAAAAAAAAAA----------------------------------------- 428
                       **     *       **                                           

consensus_15598#0      TATTTGACAAAAAAA 675
consensus_15598#1      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)