|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1457 fasta sequence
[GCTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA-GGCAATCTCTGCTGTGATGA-GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG-TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT-GGT-CATCTC-TCAGAAGACAAT-GGTTTT-GATGTATTC-ATCAAT-GGACG-CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG--CCA-CTC-AAT-CATCGA-TTG-ATGCTATGCCTA-CT-GTG--AAGATTA--CA-CAGA-GGCATCTCAGT-GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA-TTAGCCTGGTAATCTGGTTGGAGTCCT-CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC-TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAAAAACAAAAAGGGGAAAAAAAAAAAGAA]
[+] EMBL AK070491 [ CTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATAC ]
[+] EMBL CF320687 [gagtagAAAATTTTTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTTCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCC ]
[+] EMBL CF293947 [ ccATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTANACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTCTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT G ]
[+] EMBL CF296134 [ TTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAATNGGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGC ]
[+] EMBL OSS14764A [ GCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGNCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGAGGGCAATCTCTGCTGTGATGAGGGCATGGCATGGCGGGAACGAACCGGGAAGTTTATGTTAAGAGGAAGGCCAAACATA ]
[+] EMBL CB671755 [ CCTTTTCCGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCAC ]
[+] EMBL CB648122 [ CCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCA ]
[+] EMBL CF281076 [ TCGTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAG ]
[+] EMBL CB679849 [ GTGGTGGAGTTCATCTCGCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAAGA ]
[+] EMBL CB665627 [ GCCTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCCTCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTGATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGTGAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAATGGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCACGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTG ]
[-] EMBL CB665628 [ ATCCAAGATTCGGTATCATGGA GGCAATCTCTGCTGTGATGA GGCATGGCATGGCGGGAACGAACCGGGAAGTTGATG TGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGTTTGGCTCAGGGCCATGGTTGCTCTTCCGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCT ]
[+] EMBL CF196572 [ CGTGGCCAGCTTCCT GGT CATCTC TCAGAAGACAAT GGTTTT GATGTATTC ATCAAT GGACG CCGTGGTGTTGGCATGCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCACACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGNNNACCAATGGACGTCAAANNNNNNNNNATCCGTTCTCGNNNNTATGGCCTTTCCGANNNTCAAG ]
[+] EMBL AU089754 [ TTCCTGGGTCCATCTCTTCAGAAGACAAT GGTTTTNGATGTATTCAATCAATGGGACGCCCGTGGTGTTGGCATNCGCAGAGCAAACATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAG ATGATCGACGAGGGCCGCCACCTG CCA CTC AAT CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCNCCACAGAGCTCTACTGGTGCTAGCT NTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAaaaaaaa ]
[+] EMBL BM038305 [ cCCTGCCCCACCTCAAATCCATCGATTTGAATGCTATCCCTACCTGGTGGAAAGATTAACCACCAGAGGGCATCTCAGTGGGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTACCTGCTCACGCACAAGATCAACC ACC AAGTCAGAGTTCAAGTAGCCATGGGAGAACCCATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGACTTAGCCTGGTAATCTGGTTGGAGTCCTCCAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCC ATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATACCCNCNCCACAGCTTCATATCAaagaaaaaa ]
[-] EMBL CB648123 [ CATCGA TTG ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTTTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGGTATAATATAGAAGCAAGTTGCCTGAAAAAAAAACAAAAAGGGG ]
[-] EMBL CF281075 [ ATGCTATGCCTA CT GTG AAGATTA CA CAGA GGCATCTCAGT GGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTAaaa ]
[-] EMBL CB659516 [ GTTTGAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCCCTCTGATTGCATAGTTCCTTGGGTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCCCCACAGAGCTTTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTTTCGTTCCTATGGCCTTTCCGATCATCAAGCTTTAGCTTTCGTTAGA TTAGCCTGGTAATTTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATTTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCCCCCCGGAATGCTTTTCCTTGCAAGTATATCC TTCCCCAGCTTCATATCAGATACTTTTTTTACTATTTTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTTTTAATGTTGTATTACTTAATGTTTTACAGCAGAATATACTTTTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATTTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAA]
[-] EMBL CB671756 [ TTGAGCTGGGATCAAAAGCAAGGGAGATGCCATGCAAGCATTTATACCCCTTTGATTGCATAGTTCCTTGGGGGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCCCCCCAGAGCTTTATTGGTGCTAGCTGCTCGGGCCCAAGATCAACCACCCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGGCGTCAAAGGAGAAGGAATCCGTTTTTGTTCTTATGGCCTTTCCGATCATCAAGCTTTAGCTTTCGTTAGA TTAGCCTGGTAATTTGGTTGGAGTCCT CAAGACTGTTTAATTGAAGAGGTTCATAAAATGGGGGTTATGCAGGGCATTTTATCGTCCAATTTGTAATGTATGGCTTGTTATGATCCCCCCGGAATGCTTTTCCTTGCAAGTATATCC TTCCCCAGCTTCATATCAGATACTTTTTTTATTATTTTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTTTTAATGTTGTATTACTTAATGTTTTACAGCAGAAAATACTTTTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATTTCAAGGGATCAATGGTAGCAAGCATGATGATtt ]
[-] EMBL CF293948 [ GAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGGACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAGGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAAATCTCGTTAGA TTAGCCTAGAAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATG ]
[-] EMBL CF296135 [ GCCATGCAAGCATTTATACCACTCTGATTGCATAGTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCAAACCGATCATCAAGCTCTAGCTCTAATTAGA TTAGCCTGGTAATAAAAATGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTATTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCA AAAAACAGCTTCAT TCAaaaa ]
[-] EMBL CF320688 [ CCTGCCCTGTTTGCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGATAGTATGATACTTGTTTAGGTAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAATGTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATCTCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAAAAaaa ]
[+] EMBL AU094652 [ GCCGATATGAGTTGCCACCACAGAGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTTCAAGTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGCCTTTCCGATCATCAAGCTCTAGCTCTCGTTAGA TTAGCCTGGTAATCTGGTTGGAGTCCT CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCCAATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC TTCCACAaa ]
consensusID : consensus_15621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[ATCCAAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAACTTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATAGTTTGTCTCACAGACTAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAAAAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAACAGGCTAAATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAGACTAAAAACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAGAAAAAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCGAGGCAAACAAATTGAATAGAAAAAAAAACACGCACACGAATAGCGGTTTCCGCTGGTTCGATTACGATACCAGATAGGTGAGGAGGAGGCGGCGGCGGTTTGTGGTGGCGAGGAGCGGTGGGAGGA]
[+] EMBL CA305870 [ATCCAAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAACTTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATAGTTTGTCTCACAGACTAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAAAAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAACAGGCTAAATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAGACTAAAAACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAGAAAAAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCGAGGCAAACAAATTGAATAGAAAAAAAAACACGCACACGAATAGCGGTTTCCGCTGGTTCGATTACGATACCAGATAGGTGAGGAGGAGGCGGCGGCGGTTTGTGGTGGCGAGGAGCGGTGGGAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15621#0 GCTTCCAATATTATTTTTTCGCCTTTTCTGTTCGTGTGTTCGTGGTGGAGTTCATCTCGC 60
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 CTTCCCCTCTTCCGGTCCTCCCACCGCTCCTCGCCACCACAAACCGCCGCCGCCTCCTCC 120
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 TCTCCTATCTGTGCGGAGGAGGTATACCACACCTTTGGATTTTGGGGAAGCAGTACGTTG 180
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 ATTGGAAGAAATGTCAGGAGGTAGGCAATCATACTGGTGCTACCAATGTAGACAGCGGGT 240
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 GAGGCCCCGCGGCCAGGATATGGAGTGTCCCTATTGTGATTCCGGTTTTGTGTCTGAAAT 300
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 GGATGATGTTGATGCTCTCATGCGCCACTTTGTTGGGATGGATCCTGATTTCCATCGTGA 360
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 TCCAAGATTCGGTATCATGGAGGCAATCTCTGCTGTGATGAGGCATGGCATGGCGGGAAC 420
consensus_15621#1 --------------------------------------------------------ATCC 4
*
consensus_15621#0 GAACCGG-GAAGTTGATGTGAGAGGAAGGCCAAACATATTTTCTGACCTGGAGATGGAGT 479
consensus_15621#1 AAACTGATGATCTTTGCCTGATCTTTGCTTTTTTCAGATAGGAATTCTTGAACTCGCAAC 64
*** * ** ** *** ** ** * ** * * *
consensus_15621#0 TTGGCTCAGGGCCAT--GGTTGCTCTTCCGTGG--CCAGCTTCCTGGTCATCTCTCAGAA 535
consensus_15621#1 TTCTTTCAGACACATCAGGTTTCCCTCTTATAGAGCCAGGGATA-GTTTGTCTCACAGAC 123
** **** *** **** * ** * * **** * * **** ****
consensus_15621#0 GACAATGGTTTTGATGTATTCA-TCAATGGACGCCGTGGTGTTGGCATGCGCAGAGCAAA 594
consensus_15621#1 TAATACTAGATACTTATGTTCGGTTCATAGGCTGCCTCACACTGATTTATTCCCAAAAAA 183
* * * * * *** * ** * * * * ** * * * ***
consensus_15621#0 CATTGCAGACTACTTTGTTGGACCTGGACTGGATGATCTGATTGAGCAATTAACTCAGAA 654
consensus_15621#1 AAAAAGAAATCAAACTGGATCAATTACACTAGATGCTGCAACCAGGCTAAAATCCAAGAA 243
* * * * ** * * *** **** * * ** * * * ****
consensus_15621#0 TGATCGACGAGGGCCGCCACCTGCCACTCAATCA-TCGATTGATGCTATGCCTACTGTGA 713
consensus_15621#1 CAGGCTA----AATTCCCACTCGCCCGTAGATCAATCAGTTCATGGTAAG---ACTAAAA 296
* * **** *** * **** ** ** *** ** * *** *
consensus_15621#0 AGATTACA-CAGAGGCATCTCAGTGGAGACTCACATTGCCCTGTCTGCAAGGACAAGTTT 772
consensus_15621#1 ACTCTACAACAGCCACCTTTTCCACACGATTCACTCCATTCAAAATGAAAAAAAAAAAAG 356
* **** *** * * * ** **** * ** ** * **
consensus_15621#0 GAGCTGGGATCAGAAGCAAGGGAGATGCCATGCAAGCATTTATACCACTCTGATTGCATA 832
consensus_15621#1 AAA--AAGAAAGAAAAGAAAACTGATTGCAGATAACTCCCAAGATTACGCGGCCCG---A 411
* ** ** ** *** ** ** * * ** * * * *
consensus_15621#0 GTTCCTTGGCTGGAACAGCACAATTCCTGCCCTGTTTGCCGATATGAGTTGCCACCACAG 892
consensus_15621#1 GGCAAACAAATTGAATAGAAAAA---AAAACACGCACACGAATAGCGGTTTCCGCTG--G 466
* * *** ** * ** * * * *** *** ** * *
consensus_15621#0 AGCTCTACTGGTGCTAGCTGCTCGCGCACAAGATCAACCAACCAAAGTCAGAGTT--CAA 950
consensus_15621#1 TTCGATTACGATACCAGATAGGTG-----AGGAGGAGGCGGCGGCGGTTTGTGGTGGCGA 521
* * * * * ** * * * ** * * * ** * * * * *
consensus_15621#0 GTAGCAATGGGAGAACCAATGGACGTCAAAGGAGAAGGAATCCGTTCTCGTTCCTATGGC 1010
consensus_15621#1 GGAGCGGTGGGAGGA--------------------------------------------- 536
* *** ****** *
consensus_15621#0 CTTTCCGATCATCAAGCTCTAGCTCTCGTTAGATTAGCCTGGTAATCTGGTTGGAGTCCT 1070
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 CAAGACTGTTTAATCGAAGATGCTCATAAAATGGGTGTTATGCATGGCATCTTATCGTCC 1130
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 AATCTGTAATGTATGGCTTGTTATGATCACCACGGAATGCTTTTCCTTGCAAGTATATCC 1190
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 TTCCACAGCTTCATATCAGATACTTCTTTTACTATTCTGTTTACATAAAAGGTTAACGAT 1250
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 AGTATGATACTTGTTTAGATAGCTAGAGAAGGTTATTTTCTTAATGTTGTATTACTTAAT 1310
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 GTTCTACAGCAGAATATACTTCTGTCAACTGTCATTAAGACGTTTTTTTAGCTGTAAATC 1370
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 TCAAGGGATCAATGGTAGCAAGCATGATGATATAATATAGAAGCAAGTTGCCTGAAAAAA 1430
consensus_15621#1 ------------------------------------------------------------
consensus_15621#0 AAACAAAAAGGGGAAAAAAAAAAAGAA 1457
consensus_15621#1 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||