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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15644#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 521 fasta sequence
[GATACGCTAC-TAACGGC-TGACAG-----TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT-CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCAAACAAGATG---AAAAAAAAAAA-CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCGATGAAACTAATCAACTGCACCTGCCTGACGTTGTCAAACCCGATGATGCGAACAAATGCATTTGGATATGCCTT]
[+] EMBL CF299799 [GATACGCTAC TAACGGCATGACAG TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGACTTGTACAATATATTTATTACGATGGGTATGTGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGACCCAAACAAGATGAAAAAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAGTTTCCGCCGGACTCCTCGCAACCCGG ]
[+] EMBL CF300990 [GATACGCTACGTAACGGC TGACAG TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGGTGTTGACCCAAACAAGATGA AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTCTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCGATGAAACTAATCAACTGCACCTGCCTGACGTTGTCAAA ]
[+] EMBL CF336679 [ acgGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGGTGTTGCCCCAAACCAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCGAACGTTCAAAGCTGCCAAAACCGAATAGATCAATCGAGTCTCCTCTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAGCTTAGTTTCCGCCGGACTCCTCGCA ]
[+] EMBL CF336687 [ acgGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGGTGGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCCACCCAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAA ]
[+] EMBL CF336652 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA CAAGTTTGGGCTGAGTATAGTATTACATATAAGTTTCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTTTGTGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGGCCCCAACCAGATGA AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAA ]
[+] EMBL CF293286 [ TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTACCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGGTGTTGCCCCAACCAAGATG AAAAAAAAAAACCTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTCTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAGCTTAATTTCCGCCGGACTCCTCGCAACCCG ]
[+] EMBL CF335264 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACAAGTTGGGGCTGAGTTTAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAACCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATTTGTACATACATACCCAGCTGATGTTGACCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAATTGGGAATGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAGCTTGCTGGCTTGCCAACTAGCTTAATTTCCGCCGGACTCCTTGAAAC ]
[+] EMBL CF298110 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTTTGGGCATATGATTAGCCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCCACCCAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCG ]
[+] EMBL CF335447 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACCATGGGTTTGGGCATATGATTAGCCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACCCACATTTGTACATACATACCCAGGTGGTGTTGACCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAACTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTTGCAACCCGGGGGCTTGTAGGCGAAAAAACTAATCAACTGCACCTGCCTGACGTTGTCAAA ]
[+] EMBL CF337599 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTTGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACCCAGCTGGTGTTGACCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCGATGAAACTAATCAACTGCACCTGCCTGACGTTGTCAAACCCGATGATGCGAACAAATGCATTTGGATATGCCTT]
[+] EMBL CF333797 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTTGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGTGTATGTGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGGCCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTTGAAACCCGGGGGCTTGTAGGCGATGAAACTAATCAACTGCCCCTGCCTGACGTTGTCAAACCCGATGATGCAAACAAATGCATTTGGATATGCCTT]
[+] EMBL CF333499 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGGTGGTGTTGCCCCAACCAAGATG AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAGCTTGCTGGCTTGCCAACTAGCTTAATTTCCGCCGGACTCCTCCAAACCCGGGGGCTTGTAGGCAAAAAAACTAATCAACTGCACCTGCCTGACGTTGTCAAAC ]
[+] EMBL CF332637 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA CAAGTTTGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTACCCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCCAACAAGATGA AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTT ]
[+] EMBL CF302867 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCTTGCTCTTCAACCTATGTTGATACATACATATGTACATACATTCTTATTTGATGTTGGCCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCGAACGTTCAAAGCTGCCAAAACCGAATAGATCAA ]
[+] EMBL CF298548 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTTTGGGCATATGATTAACCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGGTGGTGTTGCCCCAAACAAGATG AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCCCAAC ]
[+] EMBL CF333603 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTTTCGTTTTTGACGATTTGTACAATATTTTTATTACGATGGGTTTGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTTTTAAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTAACAACCCGGGGGCTTGTAGGCGATGAAACTAATCAACTGCCCCTGCCTGACGTTGTCAAAC ]
[+] EMBL CF336577 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTATGGGCATATGATTAGCCGGGGGCTAGCATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACCCAGCTGATGTTGACCCAAACAAGATGA AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTCTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCGAAGAAACTAATCAACTGCACCTGCCTGACGTTGTCAAA ]
[+] EMBL CF298622 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACGATGGGTTTGGGCATATGATTAGCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATTTGTCCATACATACCCAGCTGATGTTGCCCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCGG ]
[+] EMBL CF335761 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTTTAGTTTTACATATAAGTTTCGTTTTTGACGATTTGTCCAATATTTTTATTACGATGGGTTTGGGCATATGATTACCCTGGGGCTAGCATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATTTGTCCATACATCCCCAGCTGATGTTGCCCCAAACAAGATG AAAAAAAAAAA CTGAACCACCAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAGCTTAATTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCGATAAAACTAATCAACTGCCCCTGCCTGACGTTGTCAAAC ]
[+] EMBL CF334658 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACAATTTGTCCAATATATTTATTACAATGGGTATGGGCATATGATTACCCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATTTGTCCATACATACCCAGCTGATGTTGCCCCAAACAAGATG AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTATTTTCCGCCGGACTCCTCGCAACCCGGGGGCTTGTAGGCAATAAACCTAATCAACTGCACCTGCCTGACGTTGTCAAAC ]
[+] EMBL CF335073 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT AAGTTGGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGGGCATATGATTACCCTGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGATGTTGCCCCAACCAAGATGA AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCTGGCTTGCCAACTAACTTAATTTCCGCCGGACTCCTCGCAACCCG ]
[+] EMBL CF294620 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGGTGGGGCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTACGTGCATATGATTAGCCTGGGGCTAACATTCACATATGCATGCTCTTCAACCTATGGTGATACATACATATGTACATACATACACAGGTGATGTTGGCCCAAACAAGATG AAAAAAAAAAA CTGAAGCAACAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAGCTCACAAGTGAGCTTGCT ]
[+] EMBL CF301376 [ TTTTTTTTTTTTTTTTTTTTTTTTTTAT CAAGTTTGGTCTGAGTATAGTATTACATATAAGTATCGTTTTTGACGATTTGTACAATATATTTATTACAATGGGTATGTGCATATGATTACCCTGGGGCTAACATTCACATATGCATGCTCTTCAACCTATGTTGATACATACATATGTACATACATACACAGCTGGTGTTGCCCCCAACAAGATG AAAAAAAAAAA CTGAACCAACAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||