These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15651#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1076 fasta sequence [CATGGACTGAGGAGTAGAAAGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG-TTGACA-TTA-TTCTCAGAAA-TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT-CCTA-TTGTGCCTCGATGAAATTGTTGATGG-A-GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT-CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT-GAATCCA-TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT-GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAACTCGCTTTTGGTATATTGAATTAACAAAACACAAAATGTGATTCCTGAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGA] [+] EMBL CF321087 [CATGGACTGAGGAGTAGAAAGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG AGGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTT ] [+] EMBL CF317173 [ GGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAGGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGGAA GGGATTGTCCTGGAAACAGAAGGAAGT ] [+] EMBL AK059189 [ GCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTT ] [+] EMBL AK099044 [ GCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGTTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAACTCGCTTTTGGT ] [+] EMBL CF311512 [ TCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGGAA GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGT ] [+] EMBL CB096323 [ TTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCTTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCATNCCCGTTGGTACATCTCTAGGACTGATACGNTCATTGCAATAGAAACGACGGAACAGAATATCTGGAATNCATTTTGCGNGTAGAGNGGCACGNTCCCTTCATTGACACTATCTGGGTTCAGTTTTGCGAGGATTTAAAAAACTGCNC AACAAGATTGGGAACGGGGATTGGTTCAATTTTGAATGGTCTTTGGTTT ] [+] EMBL CF306787 [ GTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATT ] [+] EMBL AK104166 [ TCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAAT ] [+] EMBL AB042259 [ CCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGGTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTG ] [+] EMBL AU029890 [ CCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAA NTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGT GTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGANGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAcgnc ] [+] EMBL CB096254 [ CCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCTGGGTTCAGNTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGNGATTGGTTCAATTTTGATTGGTCTTTGGTTTGGAGATTTATATATATGGTGGTGGGCAGGGGATCAATATATTGCTTATGGAGATGAATGGCTT ] [-] EMBL CF321086 [ GAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAG TTGACA TTA TTCTCAGAAA TAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCAT CCTA TTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAAaaaaaa ] [+] EMBL AU095009 [ GCAGTTTGACATTTATTTCTCAGAAATTAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCCTATTTGTGCCTCGATGAAATTGTTGATGG A GGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAAaaaaaaa ] [+] EMBL AU069270 [ ccgAGCAT CCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCT GAATCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAAaaaaaa ] [+] EMBL CF307614 [ TCCA TTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCT GGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAACTCGCTTTTGGTATATTGAATTAACAAAACACAAAATGTGATTCCTGAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGA] consensusID : consensus_15651#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1057 fasta sequence [CGTGAAGCCCAACAACGAATGAAGACTAGTAGCTGTGCTCTTCGTCCACCTCGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCAGAAATAACGTCG-ACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCGATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCATCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTA-T-CTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAAAAAAAAAA] [+] EMBL AK066739 [CGTGAAGCCCAACAACGAATGAAGACTAGTAGCTGTGCTCTTCGTCCACCTCGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCAGAAATAACGTCG ACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCGATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCATCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTA T CTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCT ] [+] EMBL CB679184 [ AAGACTTGTAGCTGTGCTCTTCGTCCACCTCGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCAGAAATAACGTCG ACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCGATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCATCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTA T CTGGGTCAGTTTTGCGAGTAT ] [+] EMBL CF336232 [ CGACTCGTCGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGATCCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCTGCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGTACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCGTCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACATTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCAGAAATAACGTCG ACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCGATGA ] [-] EMBL CF336233 [ GAGGAGAGGAGGAGAATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCAGAAATAACGTCGAACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCGATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGGTGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCCTAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGGAGCTGAAGATGGAGTAGCATCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTA T CTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTC AAAAAAA ] [-] EMBL CA758160 [ GTTGTTACATTTTTAGGACTGATACGTTCATTGCAATAAAAACGACGGAACAGAAAATTTGAATCCATTTGGGTGTAGAGGGGCACGTTCCCTTCATTGACACTA T TTGGTTCAGTTTTGGGAGTATTTAAAAAACTGCCCAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTTTTTGTTTTGTAAATTTAAAAAAAAGTTGTTGGGCAGTGGATCAAAATATTGCTTATGGAAATGAATGTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT ] [+] EMBL CF318153 [ tTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTA T CTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU173533 [ anATCTGAATCCATTTGCGTGTAGAGTGGCACGTTNCCTTCNNTGCCACTANTNCTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTGAACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTGTGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAAAAAA ] consensusID : consensus_15651#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 163 fasta sequence [TTCCCCTTGACCTGACTGGACTGAAGAGTGCTCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCTGGTTCAGTTTTGCGAGTATT] [+] EMBL CF315796 [TTCCCCTTGACCTGACTGGACTGAAGAGTGCTCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGCAATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTTCATTGACACTATCTGGTTCAGTTTTGCGAGTATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15651#0 ---------------------------------CATGGACTGAGGAGTAGAAAGACTCGT 27 consensus_15651#1 CGTGAAGCCCAACAACGAATGAAGACTAGTAGCTGTGCTCTTCGTC-CACCTCGACTCGT 59 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 CGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGAT 87 consensus_15651#1 CGGCTCGCCTCGGCTTCCTTCGTTGGTCCGCACCTTCTCCCCTCACCCGCCGCCGGGGAT 119 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 CCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCT 147 consensus_15651#1 CCGCTCCGCCGTCTCGCCTCCCGCCCCGTGGATCCACCTTGCCGCTCCAGATGGAATCCT 179 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 GCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGT 207 consensus_15651#1 GCCCTTCGGTGAAGAACATCCTTCTGCTGGATTCCGAGGGGAAGCGCGTCGCCGTCAAGT 239 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 ACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCG 267 consensus_15651#1 ACTACACGGATGATTGGCCTACTCTCTCGGCGAAGCTGGCCTTCGAGAAGTCGGTGTTCG 299 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACA 327 consensus_15651#1 TCAAGACCCAGAAAGCCACTGCCGGAGCAGAAGCTGAGATTGTAATGTTTGATGGCCACA 359 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGA 387 consensus_15651#1 TTGTGGTGTATAAGTTCATCCAAGACCTCCATTTTTTTGTTACTGGAGGAGAGGAGGAGA 419 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 ATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCA 447 consensus_15651#1 ATGAGCTTATTTTAGCATCGGTCCTTCAAGGATTCACTGATGCAGTTGACATTATTCTCA 479 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 GAAATAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCG 507 consensus_15651#1 GAAATAACGTCGACAAAAGAACAGCACTCGAAAATCTGGATCTCATCCTATTGTGCCTCG 539 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 ATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGG 567 consensus_15651#1 ATGAAATTGTTGATGGAGGGATTGTCCTGGAAACAGAAGGAAGTGTGATAGCTGAAAAGG 599 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCC 627 consensus_15651#1 TGTCAGCACATGGAATAGAAGGTGCTACTTCACTCGCTGAGCAGACTATAGTTCAAGCCC 659 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGG 687 consensus_15651#1 TAACAACAGCAAGAGAGCACTTGACCAAATCTCTTCTTATGTGATGTGCTCTGCTTTTGG 719 consensus_15651#2 ---------------------------------------------------TTCCCCTTG 9 * * * * consensus_15651#0 AGCTGA--AGATGGAGTAGCA-TCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGC 744 consensus_15651#1 AGCTGA--AGATGGAGTAGCA-TCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGC 776 consensus_15651#2 ACCTGACTGGACTGAAGAGTGCTCCCGTTGTTACATCTCTAGGACTGATACGTTCATTGC 69 * **** ** ** ** ************************************** consensus_15651#0 AATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTT 804 consensus_15651#1 AATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTT 836 consensus_15651#2 AATAGAAACGACGGAACAGAATATCTGAATCCATTTGCGTGTAGAGTGGCACGTTCCCTT 129 ************************************************************ consensus_15651#0 CATTGACACTATCTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTG 864 consensus_15651#1 CATTGACACTATCTGGTTCAGTTTTGCGAGTATTTAAAAAACTGCACAAACAAGATTGTG 896 consensus_15651#2 CATTGACACTATCTGGTTCAGTTTTGCGAGTATT-------------------------- 163 ********************************** consensus_15651#0 AACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTG 924 consensus_15651#1 AACGGTGATTGTTTCAATTTTGATTGTTCTTTGTTTTGTAGATTTATATATATGTTGTTG 956 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAACTCGCTTTTGGTA 984 consensus_15651#1 TGCAGTGGATCAATATATTGCTTATGGAGATGAATGTCTTTCTTTAA------------- 1003 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 TATTGAATTAACAAAACACAAAATGTGATTCCTGAATTTTAAAAAAAAAAAAAAAAAAAA 1044 consensus_15651#1 ------------AAAAAAAAAAA------------------AAAAAAAAAAAAAAAAAAA 1033 consensus_15651#2 ------------------------------------------------------------ consensus_15651#0 AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAGA 1076 consensus_15651#1 AAAAAAAAAACTAAAAAAAAAAAA-------- 1057 consensus_15651#2 -------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||