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Oryza sativa
cluster # 15681 cluster # 15681       Sequences # 24       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15681#0 length = 1322 sequences # 17  
consensus_15681#1 length = 714 sequences # 1  
consensus_15681#2 length = 676 sequences # 3  
consensus_15681#3 length = 374 sequences # 1  
consensus_15681#4 length = 194 sequences # 2  

consensusID : consensus_15681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1322
fasta sequence
                              [AGCACC-CACAAACAACAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC-GGCCGGCGCCGAC-GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG-CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG-TTTTCCTCTTTAGGATGAA-CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAAAAAAAAAAAAAAAAGGAA]

[+] EMBL CB656771             [AGCACCACACAAACAACAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGGCCACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB657513             [  CACC CCCAAACAACAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C27035               [                CAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGANCGGGAGCGGNATCTTTGC GGCCGGCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK060532             [                     CCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAtgcag              ]
[+] EMBL OSS4570A             [                          AGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGNGCGGCCGGCGCCGGTNAGGAAGTCCCACACCTCGACGGNCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCNGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTNGCGGGCCGGCGCCGACGGGGGAGGCGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB645207             [                            tctaccttAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK068724             [                                       CTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACA TTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATT                                                                                                                         ]
[+] EMBL AK101680             [                                          GAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTG                                                                                                                                                                     ]
[+] EMBL CB657412             [                                                                                    GCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB661386             [                                                                                                                                                                                                                                                                                                                               GCATCTTCCC GGCCGGCGCCGAC GGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCCACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGGTAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAcc                                                                                                                                                                                                                      ]
[-] EMBL CB657514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGTAAGATGAAGAAGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAATTGGCAAGAAATTCTCCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTTGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTTTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGATGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTGTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTTTTTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCT                       ]
[-] EMBL CB657413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGCAGATTCAAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTTTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTTTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTTTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGACAAATAAGAAATTGGTTGGTATGTTGCCTAAAAAAAAAAAAAAAAAAAGGA ]
[-] EMBL CB661387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGAAAAACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCATACATGGTGTGCGTTTTCAGTTATGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTTTTAAAGAATAATAAATTGGTTGG                                 ]
[+] EMBL AU162117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAGATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAA CTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGC                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB645223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCAGCAAATGGCCCCGGTGCCTCACACACACCTGTGAGAAATGCAAATGTGAG CAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTTTGCGGAGAAGCATTTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTTTGGTGGACCCCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTTTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTTGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGAAAAGTAATAAATTGGTTGGT                                ]
[+] EMBL AU162118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAAATGGCACCGGTGCCTCACACACACTTGTGAGAAATGCAAATGTGAGCCAGCTTCTCGTTTGGGGAGGCCAACA TGACAGCGTGNCGAAAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTGTTTTTCCTCTTTAGNATGAACCCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATANTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAAAAAAAAAAAAAAAAaaaa]
[+] EMBL AU181723             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCAAGAAATTCACCGATCTCACAGGCAACAACATATTCAAAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAATGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTG TTTTCCTCTTTAGGATGAA CCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAAaaaaa                                                                                                                                                   ]


>consensus_15681#0 AGCACCCACAAACAACAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGA GAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACC TCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCC CCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGG TCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGA AGGAGATGACCGGGAGCGGCATCTTCGCGGCCGGCGCCGACGGGGAGGCGGAGGAGCCCG GCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCC ACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGG TAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGA AGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAG ATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTG TGAGAAATGCAAATGTGAGCAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGA AAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCA AAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAA TGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGA ACCGCAAGCCTCCTGGCGGCGAGAGCAGCATTGCGCTGGTTTAGCATTCTGGTGGACACC GTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATTG AGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATAAAGTTTGTTTCCTGCTGATGT GGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTTTGGTAT GGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCAT TTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCAGATCT GTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAAAAAAAAAAAAAAAAGG AA



consensusID : consensus_15681#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence
                              [TGACNGNCCGTGCCTTGTCCCTCAAATGAGGCTTATGGCAGGACCCACAATGGCCGNCCTCACACCCANCCTGTGAGAATGCGATGTGNCCCGCTTCTGTTGGGAGGCCCACACTACNGCGTGTCGAAAACTCCAAGAAAGATACTGCAAGAATTTCACCGATCTCACAGGCAACAACATATTGCAAAGGAGACGGGCCCTTGCTTCTGCGGAGAAGCATCTGAGCACCCGAAGCTGAAAGAAATTACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCACTTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCCGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACACGGCTATGCTCTCCTAGCATAACCTTTGTTGTGGTTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCCAATGGAACAGCCTACACTGGTGTGCGCTCTCATTTCTGTGACTGAAGATCCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCGATCTGTACTGTTGACAATAATAAATTTGGTTGGTATGTTGCCTAAAAAAAAAA]

[+] EMBL BM037849             [TGACNGNCCGTGCCTTGTCCCTCAAATGAGGCTTATGGCAGGACCCACAATGGCCGNCCTCACACCCANCCTGTGAGAATGCGATGTGNCCCGCTTCTGTTGGGAGGCCCACACTACNGCGTGTCGAAAACTCCAAGAAAGATACTGCAAGAATTTCACCGATCTCACAGGCAACAACATATTGCAAAGGAGACGGGCCCTTGCTTCTGCGGAGAAGCATCTGAGCACCCGAAGCTGAAAGAAATTACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCACTTGCGCTGGTTTAGCATTCTGGTGGACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCCGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACACGGCTATGCTCTCCTAGCATAACCTTTGTTGTGGTTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCCAATGGAACAGCCTACACTGGTGTGCGCTCTCATTTCTGTGACTGAAGATCCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCGATCTGTACTGTTGACAATAATAAATTTGGTTGGTATGTTGCCTAAAAAAAAAA]


>consensus_15681#1 TGACNGNCCGTGCCTTGTCCCTCAAATGAGGCTTATGGCAGGACCCACAATGGCCGNCCT CACACCCANCCTGTGAGAATGCGATGTGNCCCGCTTCTGTTGGGAGGCCCACACTACNGC GTGTCGAAAACTCCAAGAAAGATACTGCAAGAATTTCACCGATCTCACAGGCAACAACAT ATTGCAAAGGAGACGGGCCCTTGCTTCTGCGGAGAAGCATCTGAGCACCCGAAGCTGAAA GAAATTACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGC GGGAACCGCAAGCCTCCTGGCGGCGAGAGCAGCACTTGCGCTGGTTTAGCATTCTGGTGG ACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCA GATTGAGCTGCCCGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCT GATGTGGGTAAAGACACGGCTATGCTCTCCTAGCATAACCTTTGTTGTGGTTTGTAGTTT GGTATGGTCAGTCACTTTGCTGTGACATACTCCAATGGAACAGCCTACACTGGTGTGCGC TCTCATTTCTGTGACTGAAGATCCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCC GATCTGTACTGTTGACAATAATAAATTTGGTTGGTATGTTGCCTAAAAAAAAAA



consensusID : consensus_15681#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 676
fasta sequence
                              [GTGTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTG-AGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCA-ACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGCGGCCGGCGCCGACGGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGGTGCTTGCTTGCTTGCTCGCTCGCTCTAGGGAGATGCAATGGAGCGAATTCACCAGATTGGGGGTTTTCTCTCTTGCACTAGAGTAATGCTAGAGTAGATATTATTGTTGGAAATTACACGATTTCATATGATGGGTGCATAATTTTGCAATGCTGTGTTGCTTGTTAGCGTGAAAGTTATGAGAAAAGCTCGCGGCGTTGTTAATGCGTATTTTAGCTTCTCTGTGGAACAAATTAGTTCAGATTGATGGGTTGAACAAAACCTATTAATTCCAGTTGTAGTTAGTTGTTTGAACTG]

[+] EMBL CB645222             [GTGTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCCGGTG AGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCA ACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGCGGCCGGCGCCGACGGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGGTGCTTGCTTGCTTGCTCGCTCGCTCTAGGGAGATGCAATGGAGCGAATTCACCAGATTGGGGGTTTTCTCTCTTGCACTAGAGTAATGCTAGAGTAGATATTATTGTTGGAAATTACACGATTTCATATGATGGGTGCATAATTTTGCAATGCTGTGTTGCTTGTTAGCGTGAAAGTTATGAGAAAAGCTCGCGGCGTTGTTAATGCGTATTTTAGCTTCTCTGTGGAACAAATTAGTTCAGATTGATGGGTTGAACAAAACCTATTAATTCCAGTTGTAGTTAGTTGTTTGAACTG]
[+] EMBL C27399               [                                                     GCCGGCNC  GTGNAGGAAGTCCCACACCTCGACNGCCGACCTCCTCGCCTNGCCGCAGCAGCAGCACCAGCCCNACGGCCACG CGCTTCCACCCCCTCCCCCGCTCGCCNCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTNGTGTTCGGTTGCCAGGTCACGGAGGAGGAGGCCGAGAG CTCATACAAGAGGAAGCCATNCTCCGNGCCCAAGTGGAAGGAGATGACCGGGAGCn                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU176405             [                                                                                                                                           gnCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCA ACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGCGGCCGGCGCCGACGGGG                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_15681#2 GTGTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCG CCGGTGAGGAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCAC CAGCCCGACGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCG GAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTC AACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTC GCGGCCGGCGCCGACGGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCC GCCCCGCGCAATTACCAGGTGCTTGCTTGCTTGCTCGCTCGCTCTAGGGAGATGCAATGG AGCGAATTCACCAGATTGGGGGTTTTCTCTCTTGCACTAGAGTAATGCTAGAGTAGATAT TATTGTTGGAAATTACACGATTTCATATGATGGGTGCATAATTTTGCAATGCTGTGTTGC TTGTTAGCGTGAAAGTTATGAGAAAAGCTCGCGGCGTTGTTAATGCGTATTTTAGCTTCT CTGTGGAACAAATTAGTTCAGATTGATGGGTTGAACAAAACCTATTAATTCCAGTTGTAG TTAGTTGTTTGAACTG



consensusID : consensus_15681#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 374
fasta sequence
                              [AGAGGACGAGACAAGGGGGGACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGTTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACGTTTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCGGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAAAAAAA]

[-] EMBL CA761213             [AGAGGACGAGACAAGGGGGGACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGTTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACGTTTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTCTCCTTTCATTGTGTACGCCGGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTTGCCTAAAAAAAAAA]


>consensus_15681#3 AGAGGACGAGACAAGGGGGGACACCGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCC TAGGAGTCGTTCTATCAGCAGATTGAGCTGCCAGTTTGTTTTCCTGTTTCGACGGTTAGG CATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACGT TTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAA CAGCCTACATGGTGTGCGCTCTCATTTCTGTGACTGAAGATGCCGTTGCTTTGGTGTCTC TCCTTTCATTGTGTACGCCGGATCTGTACTGTTGACAAATAATAAATTGGTTGGTATGTT GCCTAAAAAAAAAA



consensusID : consensus_15681#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 194
fasta sequence
                              [GGGTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCCAAAAAAAAAA]

[+] EMBL BI798948             [GGGTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCTCTCCAAAAAAAAAA]
[+] EMBL BI799311             [GGGTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCTGATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTCTTGTAGTTTGGTATGGTCAGTCCCTTTGCTGTGACATACTCAAATGGAACCGCCTACATGGTGTGCGCTCTCAAAAAAAAAA ]


>consensus_15681#4 GGGTGAGCTGCCAGTTTGCTTTCCTGTTTCGACGGTTAGGCATGAAGTTTGTTTCCTGCT GATGTGGGTAAAGACAGGCTATGCTCTCCTAGCATAACATTTGTTGTGGTCTTGTAGTTT GGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACATGGTGTGCGCT CTCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      AGCACCCACAAACAACAACGCCTATAGTCTAGTAGAGCCTAGAGAGAGAAAGCGCGAGGA 60
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      GAGGAGAGGAGATGGAGCGGCCGGCGCCGGTGAGGAAGTCCCACACCTCGACGGCCGACC 120
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      TCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGACGGCCACGCCGCCTCCACCCCCTCCC 180
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      CCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCTGAGGAAGGTGGTGTTCGGTGGCCAGG 240
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      TCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAGGAAGCCATGCTCCGCGCCCAAGTGGA 300
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      AGGAGATGACCGGGAGCGGCATCTTCGCGGCCGGCGCCGACGGGGAGGCGGAGGAGCCCG 360
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      GCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCGCAATTACCAGCCAGTTACTGTGAGCC 420
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      ACATTTCATTTGCTGAGGATGGAAGTGTTCCTCCCAAAAAGCCAACTTCAGTGGCTGAGG 480
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      ------------------------------------------------------------
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      TAGCAAAGCAGCGTGAGCTTAGCGGTACTCTGCAAAGTGAAGCAGACAGTAAGATGAAGA 540
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      -------------------------------------------------TGACNGNCCGT 11
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      AGCAGATTTCAAATGCAAAATCAAAGGAACTCAGTGGCCATGGCCTTTTTGACCCTCAAG 600
consensus_15681#2      ------------------------------------------------------------
                                                                                   

consensus_15681#1      GCCTTGTCCCTCA---AATGAGGCTTATGGCAGGACCCACAATGGCCGNCCTCACACCCA 68
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      ATGTAAGGCCTAATGGGGCAAGGAACACAGCAAATGGCACCGGTGCCTCACACACACCTG 660
consensus_15681#2      ---------------------------------------------GTGTAGTAGAGCCTA 15
                                                                                   

consensus_15681#1      NCCTGTGAGAATGCGATGTGNCCCGCTTCTGTTGGGAGGCCCACACT-ACNGCGTGTCGA 127
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      TGAGAAATGCAAATGTGAGCAGCTTCTCGTTTGGGGAGGCCAACACTGACAGCGTGACGA 720
consensus_15681#2      GAGAGAGAAAGCGCGAGGAGAGGAGAGGAGATGGAGCGGCCGGCGCC-------GGTGAG 68
                                                                                   

consensus_15681#1      AAACTCCAAGAAAGATACT--GCAAGAATTTCACCGATCTCACAGGCAACAACATATTGC 185
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      AAACTGCAAAGAAGATAACTGGCAAGAAATTCACCGATCTCACAGGCAACAACATATTCA 780
consensus_15681#2      GAAGTCCCACACCTCGACGGCCGACCTCCTCGCCTGGCCGCAGCAGCAGCACCAGCCCGA 128
                                                                                   

consensus_15681#1      AAAGGAGACGGGCCCTTGCTTCTGCGGAGAAGCATCTGAGCACC-CGAAGCTGAAAGAAA 244
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      AAGGAGACGAGGCCCCTGCTTCTGCGGAGAAGCATCTGAGCACCGCGAAGCTGAAAGAAA 840
consensus_15681#2      CGGCCACGCCGCCTCCACCCCCTCCCCCGCTCGCCGCCCCCACCAGCCATCGGAGGCGCT 188
                                                                                   

consensus_15681#1      TTACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGA 304
consensus_15681#3      ------------------------------------------------------------
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      TGACTGGGAGCAACATATTCGCGGAAGGACAGGCGCCAACCCGAGAGTATCATAGCGGGA 900
consensus_15681#2      GAGGAAGGTGGTGTTCGGTGGCCAGGTCACGGAGGAGGAGGCCGAGAGCCTCAACAAGAG 248
                                                                                   

consensus_15681#1      ACCGCAAGCCTCCTGGCGGCGAGAGCAGCACTTGCGCTGGTTTAGCATTCTGGTGGACAC 364
consensus_15681#3      -----------------------------------AGAGGACGAG-ACAAGGGGGGACAC 24
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      ACCGCAAGCCTCCTGGCGGCGAGAGCAGCA-TTGCGCTGGTTTAGCATTCTGGTGGACAC 959
consensus_15681#2      GAAGCCATGCTCCGCGCCCAAGTGGAAGGAGATGACCGGGAGCGGCATCTTCGCGGCCGG 308
                                                                                   

consensus_15681#1      CGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATT 424
consensus_15681#3      CGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATT 84
consensus_15681#4      --------------------------------------------------------GGGT 4
consensus_15681#0      CGTCGCTGTCCGTGTTTTCCTCTTTAGGATGAACCCTAGGAGTCGTTCTATCAGCAGATT 1019
consensus_15681#2      CGCCGACGGGGAGGCGGAGGAGCCCGGCAGCGCCGCCGCGCCCGGCCGCGCCGCCCCGCG 368
                                                                                   

consensus_15681#1      GAGCTGCCCG---TTTGCTTTCCTGTTTCGACGGT-TAGGCATGAAGTTTGTTTCCTGCT 480
consensus_15681#3      GAGCTGCCAG---TTTGTTTTCCTGTTTCGACGGT-TAGGCATGAAGTTTGTTTCCTGCT 140
consensus_15681#4      GAGCTGCCAG---TTTGCTTTCCTGTTTCGACGGT-TAGGCATGAAGTTTGTTTCCTGCT 60
consensus_15681#0      GAGCTGCCAG---TTTGCTTTCCTGTTTCGACGGT-TAGGCATAAAGTTTGTTTCCTGCT 1075
consensus_15681#2      CAATTACCAGGTGCTTGCTTGCTTGCTCGCTCGCTCTAGGGAGATGCAATGGAGCGAATT 428
                        *  * ** *    *** ** * ** *    ** * **** *       **   *    *

consensus_15681#1      GATGTGGGTAAAGACACGGCTATGCTCTCCTAGCATAACCTTTGTTGTGGT-TTGTAGTT 539
consensus_15681#3      GATGTGGGTAAAGACA-GGCTATGCTCTCCTAGCATAACGTTTGTTGTGGTCTTGTAGTT 199
consensus_15681#4      GATGTGGGTAAAGACA-GGCTATGCTCTCCTAGCATAACATTTGTTGTGGTCTTGTAGTT 119
consensus_15681#0      GATGTGGGTAAAGACA-GGCTATGCTCTCCTAGCATAACATTTGTTGTGGTGTTGTAGTT 1134
consensus_15681#2      CACCAGATTGGGGGTT-TTCTCTCTTGCACTAGAGTAATGCTAGAGTAGATATTATTGTT 487
                        *   *  *   *      ** *  *   ****  ***   * *    * * ** * ***

consensus_15681#1      TGGTATGGTCAGTCACTTTGCTGTGACATACTCCAATGGAACAGCCTACACTGGTGTGCG 599
consensus_15681#3      TGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACA-TGGTGTGCG 258
consensus_15681#4      TGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACA-TGGTGTGCG 178
consensus_15681#0      TGGTATGGTCAGTCACTTTGCTGTGACATACTCAAATGGAACAGCCTACA-TGGTGTGCG 1193
consensus_15681#2      GGAAATTACACGATTTCATATGATGG-GTGCATAATTTTGCAATGCTGTGTTGCTTGTTA 546
                        *  **     *      *    **   * *   * *     *  **    ** *     

consensus_15681#1      CTCTCATTTCTGTGACTGAAGATCCCGTTGCT-TTGGTGTCTCTCCTTTCAT-TGTGTAC 657
consensus_15681#3      CTCTCATTTCTGTGACTGAAGATGCCGTTGCT-TTGGTGTCTCTCCTTTCAT-TGTGTAC 316
consensus_15681#4      CTCTC----CAAAAAAAAAA---------------------------------------- 194
consensus_15681#0      CTCTCATTTCTGTGACTGAAGATGCCGTTGCT-TTGGTGTCTCTCCTTTCAT-TGTGTAC 1251
consensus_15681#2      GCGTGAAAGTTATGAGAAAAGCTCGCGGCGTTGTTAATGCGTATTTTAGCTTCTCTGTGG 606
                          *          *   **                                        

consensus_15681#1      GCCG-ATCTGTACTG-TTGACAA-T--AATAAATTTGGTTGGTATGTTGCCTAAAAAAAA 712
consensus_15681#3      GCCGGATCTGTACTG-TTGACAAAT--AATAAATT-GGTTGGTATGTTGCCTAAAAAAAA 372
consensus_15681#4      ------------------------------------------------------------
consensus_15681#0      GCCAGATCTGTACTG-TTGACAAAT--AATAAATT-GGTTGGTATGTTGCCTAAAAAAAA 1307
consensus_15681#2      AACAAATTAGTTCAGATTGATGGGTTGAACAAAACCTATTAATTCCAGTTGTAGTTAGTT 666
                                                                                   

consensus_15681#1      AA------------- 714
consensus_15681#3      AA------------- 374
consensus_15681#4      ---------------
consensus_15681#0      AAAAAAAAAAAGGAA 1322
consensus_15681#2      GTTTGAACTG----- 676
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)