These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15696#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 779 fasta sequence [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA-ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG-CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA-AGGTGCTCGGCGAGGAGGAGAAGG-CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG-AAGC-TGGAG-AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG-C-T-GCGGCT-AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT-GGTGTGTCA-ACTGACAAAAAC-AGGAACTA-TGCTGTCCTGGC-AGGCACTG-TTGC-TGCTTTGA-G-TGGCCTG-GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA-CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA] [+] EMBL CF340402 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATA ] [+] EMBL CF305224 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAA ] [+] EMBL CF338978 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCA ] [+] EMBL CF333889 [ CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGCNTGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNGGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATA ] [+] EMBL CF333736 [ CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAGAAAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGACA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNNGGTGGTATCTCTTGTCAAA CCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAG ] [+] EMBL AB029060 [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCGTTGTTTCTAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA] [+] EMBL AU070198 [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTNAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGTCA CTTGACAAAAAC AGGAACTA TGCTGTCCTTGC AGGCACTGTTTGC TGCTTTGANT TGGCCTG GGGTGG ] [+] EMBL OSR1762A [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTGCC T GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGNGTCAAGATCTGCT GGTGTGTCAct ] [+] EMBL C98019 [ acgcttccgGTTGGGAGAGAGAGACATTTTCACGGACCCA ACGAAGCGAA ATCCTCTCGTCTCGTGTTCTAGGNTTTCTCGCGN CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGG T AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAAAAAAAAa ] [+] EMBL CF338965 [ TGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAA ] [+] EMBL AU161831 [ GAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCG AGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGGCCCGCC AGAACGTCTACATCAAGNAAATNGNACACGAG AAGC TTGAG AAGTTTGCCCACAA GNCCCCAACCCAGGA ] [+] EMBL OS0382A [ GAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CGTCCCGACTAAACGCTGT AAGACTGGAAGCGtttc ] [+] EMBL BI805593 [ gggCACGGATCCACACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGGTCGATGGA GCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAA G CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGTAAGC TGGAG AAGTTGGCCCACAAGGGCCCC ACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTC AAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CCCTGCACTGAGTTTCCTATAGCATCAAAAAAAa ] [+] EMBL C27837 [ AGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGTTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGGTGTGTCA ACTGACANAAACAAGGAACTATTGTTGTCCTGGCAAGGCACTGTTTGCTTGCTT ] [+] EMBL C74344 [ GCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGT T ACTGACAAAAAC AGG ACTA TGCTGTCCTGGC A GCACTG TTGC TGCNTTGA G TTGCCTG GGGTGG ] [+] EMBL BI806423 [ GCC ACGNAGCGAAGATCCTCTCGTCTCGT TTCTAGGTTTTCTC C G CGATGGA GC GCGGCTA GGCTCCATCCACGGCGGC GCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGC GCACAGGTGCTC GCGAGGA GAGAA G CC CCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCCCAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCANACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCCCTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCCAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACANCCCTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCAaaaaaaaaa ] [+] EMBL AU077722 [ CA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTA GGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG C TNGCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCT ] [+] EMBL OSC2928A [ GG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTGTTTGC TGCTTTGA GTTGGCCTN GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTG ] [+] EMBL AU165285 [ aATGAAGCCGNCGG TAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAAGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAAaaa ] [+] EMBL C29070 [ ATGGAGGCGGCGGCTAGGGCTCCATCNAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGNCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAGGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAANCCAGGAGAGCAAGCTT ] [+] EMBL AK059442 [ AATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGAT ] [+] EMBL AU077723 [ GGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GC GNT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAaaa ] [+] EMBL AU172795 [ GAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAG TTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATAAAAaaaaaa ] consensusID : consensus_15696#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 357 fasta sequence [ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF333735 [ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15696#0 CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCAACGAAGCGAAGATCCT 60 consensus_15696#1 ------------------------------------------------------------ consensus_15696#0 CTCGTCTCGTGTTCTAGGGTTTCTCGCGGCGATGGAGGCGGCGGCTAGGGCTCCATCCAG 120 consensus_15696#1 ------------------------------------------------------------ consensus_15696#0 GGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCAAGGTGCTCGGCGA 180 consensus_15696#1 ------------------------------------------------------------ consensus_15696#0 GGAGGAGAAGGCCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGAAGCTGGAGAA 240 consensus_15696#1 ------------------------------------------------------------ consensus_15696#0 GTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTGCTGCGGCTAA 300 consensus_15696#1 ----------------------------------------ACCGCAGGTGTTGCGGCTAA 20 ********** ********* consensus_15696#0 CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGTGTGTCAACTGACAA 360 consensus_15696#1 CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAA 80 ************************************** ********** ********** consensus_15696#0 AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 420 consensus_15696#1 AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 140 ************************************************************ consensus_15696#0 TCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 480 consensus_15696#1 TTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 200 * **************** **** ************************************ consensus_15696#0 CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 540 consensus_15696#1 CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 260 ************************************************************ consensus_15696#0 CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 600 consensus_15696#1 CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 320 ************************************************************ consensus_15696#0 CTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTG 660 consensus_15696#1 TTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 357 ****** **** * * consensus_15696#0 ATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTT 720 consensus_15696#1 ------------------------------------------------------------ consensus_15696#0 TGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA 779 consensus_15696#1 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||