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Oryza sativa
cluster # 15696 cluster # 15696       Sequences # 24       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15696#0 length = 779 sequences # 23  
consensus_15696#1 length = 357 sequences # 1  

consensusID : consensus_15696#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 779
fasta sequence
                              [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA-ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG-CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA-AGGTGCTCGGCGAGGAGGAGAAGG-CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG-AAGC-TGGAG-AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG-C-T-GCGGCT-AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT-GGTGTGTCA-ACTGACAAAAAC-AGGAACTA-TGCTGTCCTGGC-AGGCACTG-TTGC-TGCTTTGA-G-TGGCCTG-GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA-CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA]

[+] EMBL CF340402             [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATA                                                                                            ]
[+] EMBL CF305224             [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAA                                                                     ]
[+] EMBL CF338978             [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCA                                                                                                                                                                                                                                        ]
[+] EMBL CF333889             [   CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGCNTGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNGGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATA                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF333736             [   CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAGAAAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGACA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNNGGTGGTATCTCTTGTCAAA CCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAG                                                                                                                                                                                                      ]
[+] EMBL AB029060             [            AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCGTTGTTTCTAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA]
[+] EMBL AU070198             [            AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTNAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGTCA CTTGACAAAAAC AGGAACTA TGCTGTCCTTGC AGGCACTGTTTGC TGCTTTGANT TGGCCTG GGGTGG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSR1762A             [            AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTGCC T GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGNGTCAAGATCTGCT GGTGTGTCAct                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C98019               [    acgcttccgGTTGGGAGAGAGAGACATTTTCACGGACCCA ACGAAGCGAA ATCCTCTCGTCTCGTGTTCTAGGNTTTCTCGCGN CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGG T AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAAAAAAAAa                                                                                 ]
[+] EMBL CF338965             [               TGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU161831             [                  GAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCG AGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGGCCCGCC AGAACGTCTACATCAAGNAAATNGNACACGAG AAGC TTGAG AAGTTTGCCCACAA GNCCCCAACCCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OS0382A              [                      GAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CGTCCCGACTAAACGCTGT AAGACTGGAAGCGtttc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI805593             [                               gggCACGGATCCACACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGGTCGATGGA GCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAA G CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGTAAGC TGGAG AAGTTGGCCCACAAGGGCCCC ACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTC AAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CCCTGCACTGAGTTTCCTATAGCATCAAAAAAAa                                                                                                                                                                                                             ]
[+] EMBL C27837               [                                       AGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGTTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGGTGTGTCA ACTGACANAAACAAGGAACTATTGTTGTCCTGGCAAGGCACTGTTTGCTTGCTT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C74344               [                                        GCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGT T ACTGACAAAAAC AGG ACTA TGCTGTCCTGGC A GCACTG TTGC TGCNTTGA G TTGCCTG GGGTGG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI806423             [                                        GCC  ACGNAGCGAAGATCCTCTCGTCTCGT TTCTAGGTTTTCTC C G CGATGGA GC GCGGCTA GGCTCCATCCACGGCGGC GCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGC GCACAGGTGCTC GCGAGGA GAGAA G CC CCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCCCAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCANACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCCCTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCCAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACANCCCTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCAaaaaaaaaa                                                                                                                                                              ]
[+] EMBL AU077722             [                                          CA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTA GGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG C TNGCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCT                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSC2928A             [                                                                                        GG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTGTTTGC TGCTTTGA GTTGGCCTN GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTG                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU165285             [                                                                                            aATGAAGCCGNCGG TAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAAGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAAaaa                                                                               ]
[+] EMBL C29070               [                                                                                             ATGGAGGCGGCGGCTAGGGCTCCATCNAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGNCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAGGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAANCCAGGAGAGCAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059442             [                                                                                                                                                                                                                            AATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGAT                                                                                                    ]
[+] EMBL AU077723             [                                                                                                                                                                                                                                                          GGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GC GNT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAaaa                                                                                      ]
[+] EMBL AU172795             [                                                                                                                                                                                                                                                                                 GAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAG TTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATAAAAaaaaaa                                                                                          ]


>consensus_15696#0 CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCAACGAAGCGAAGATCCT CTCGTCTCGTGTTCTAGGGTTTCTCGCGGCGATGGAGGCGGCGGCTAGGGCTCCATCCAG GGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCAAGGTGCTCGGCGA GGAGGAGAAGGCCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGAAGCTGGAGAA GTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTGCTGCGGCTAA CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGTGTGTCAACTGACAA AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA TCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT CTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTG ATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTT TGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA



consensusID : consensus_15696#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence
                              [ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF333735             [ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15696#1 ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTT GCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCT TTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGAC TGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGT TTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAA GTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15696#0      CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCAACGAAGCGAAGATCCT 60
consensus_15696#1      ------------------------------------------------------------
                                                                                   

consensus_15696#0      CTCGTCTCGTGTTCTAGGGTTTCTCGCGGCGATGGAGGCGGCGGCTAGGGCTCCATCCAG 120
consensus_15696#1      ------------------------------------------------------------
                                                                                   

consensus_15696#0      GGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCAAGGTGCTCGGCGA 180
consensus_15696#1      ------------------------------------------------------------
                                                                                   

consensus_15696#0      GGAGGAGAAGGCCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGAAGCTGGAGAA 240
consensus_15696#1      ------------------------------------------------------------
                                                                                   

consensus_15696#0      GTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTGCTGCGGCTAA 300
consensus_15696#1      ----------------------------------------ACCGCAGGTGTTGCGGCTAA 20
                                                               ********** *********

consensus_15696#0      CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGTGTGTCAACTGACAA 360
consensus_15696#1      CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAA 80
                       ************************************** ********** **********

consensus_15696#0      AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 420
consensus_15696#1      AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 140
                       ************************************************************

consensus_15696#0      TCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 480
consensus_15696#1      TTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 200
                       * **************** **** ************************************

consensus_15696#0      CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 540
consensus_15696#1      CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 260
                       ************************************************************

consensus_15696#0      CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 600
consensus_15696#1      CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 320
                       ************************************************************

consensus_15696#0      CTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTG 660
consensus_15696#1      TTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 357
                        ****** ****            *        *                          

consensus_15696#0      ATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTT 720
consensus_15696#1      ------------------------------------------------------------
                                                                                   

consensus_15696#0      TGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA 779
consensus_15696#1      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)