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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15712#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2016 fasta sequence
[TCAGCCAGCTTCGCCTTGCTCGCTAGCTATCCATCTCTTCCTCCTCTTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGGTTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGGTTCGTCCTCGCCCTCGCTAGCTCTCCGGATTGTGTGTGATTTGTGCTCAACGAGTGCGTTCTTGAATTTGCAGAGCAAGAGGAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGAGCCTGAGGTCAGCGCCACCCCTGCCGTCGTGGTCACCGCCGCAGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACCTGCCGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGGAACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGTACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTACCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGATGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCA-CCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGGTCACCTACATGGATTACAATGTCCAGCTGGAGGAGAGCTCGCTGATCGATCAGTACCCGCGCA-ATCACCAGGTGCTCA-CTGATCCCTACGCCGTGCACAAG-CA-AGGCTGGGACGCGCT-CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA-GGTT-CA-AGAAGACA-TTGCA-GGAGGCGCTCGACA-GGTTGCCGCCAGCATGAGA-GCTTGATGAACTGATGAAAGCTCAAGCCCA-CGA-GGT-GGTGGTGGTGGTGGTGGTA-GATAGATA-GGTTGGTGTATCTAT-CTGTG-CCTTCT-CTTGCTTAACTTA-TTTTTCCTTTTGAAATTCTT-TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT-ACATATGCCTAGCTGATGA-GTAATTTATACCCT-TTGT-GATTATTAATTGGTTGTTTATTTAAAAATAAATGTCAAGATACAAAATTGTGGATTAAAAAAAA]
[+] EMBL AK119583 [TCAGCCAGCTTCGCCTTGCTCGCTAGCTATCCATCTCTTCCTCCTCTTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGGTTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGGTTCGTCCTCGCCCTCGCTAGCTCTCCGGATTGTGTGTGATTTGTGCTCAACGAGTGCGTTCTTGAATTTGCAGAGCAAGAGGAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGAGCCTGAGGTCAGCGCCACCCCTGCCGTCGTGGTCACCGCCGCAGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACCTGCCGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGGAACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGTACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTACCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGATGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCA CCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGGTCACCTA ]
[-] EMBL CB659064 [ ACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGATGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCA CCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGGTCACCTAC ]
[+] EMBL BI803064 [ tgCGGCGCCCTAGAGTGGCTCACCCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGTTCACCTACATGGATTACAATGTCCAGCTGGAGGAGAGCTCGCTGATCGATCAGTACCCGC CA ATCACCAGGTGCTCA CTGATCCCTAC CCGTGCACAAG CA AGGCTGGGACGCGCTCCAAGACGGCGTACCTGGACAA CAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACACTTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCACCGAGGGTGGGTGGTGGTGGTGGTGGTAGGATAGATAGGGTTGGTGTATCTATCCTGTG CCTTCTGCTTGCTTAACTTACTTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATATGCCTAGCTGATGA GTAATTTATACCCC CCGTCGATTATTAATTGGTTGTTTATTTAAAAA ]
[+] EMBL AU174826 [ GGAGAGCTCGCTGATCGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATATGCCTAGCTGATGA GTAATTTATACCCT TTGT GATTATTAATTGGTTGTTTATTTAAAAAAAAA ]
[+] EMBL AF264730 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAAATTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTTTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTTAACATATGCCTAGCTGATGA GTAATTTATACCCT TTGT GATTATTAATTGGTTGTTTATTTACAAGTAAATGTCAAGATACAAAATTGTGGATTAAAAAAAA]
[+] EMBL BI804563 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATATGCCTAGCTGATGA GTAATTTATACCCT TTGT GATTATTAATTGGTTGTTTATTTAAAAA ]
[+] EMBL BI812754 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCACCTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACACGGTTCCACAGAAGACACTTGCACGGAGGCGCTCGACACGGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCACCGA GGT GT GT GT GT GTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGC ACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACCAGAACATCATGTT ACATATGCCTAGCTGATGA GTAATTTATACCCT TTGT GATTAaaaaaaaaa ]
[+] EMBL BM038234 [ CGATCAGTACCCGCGCATATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CATAGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACNTCTAGATGGACATGGACA GGTT CA AGAAGAC TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTC CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGC ACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATATGCCTAGCTGATGANNNACNTTATACCCTCTTGT GATTAannaaaa ]
[+] EMBL AU093501 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATAaaaaaaa ]
[+] EMBL BQ906739 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATAaaaaa ]
[+] EMBL BI803227 [ CGATCAGTACCCGC CA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAGCCC AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTT CCGCCAGCATGAGACGCTTGATGAACTGATGAAAGCTCAAGCCCACCGA GT TGT GTTGT GTGTTGGTA GATAGATA GTTTGGTGTATCTAT CTGTC CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACCCCTTCTTCTTCCTTTACCCACATTCATTTGATCTGTTGTTTTGGAAAAa ]
[+] EMBL BI802983 [ CGATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGAGCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCCGCATGACC GCTTGATGAACTGATGAAAGCTCAAGCCCA CGA GGT GTGGT GT GTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTGCCCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTTGTTTAC CCTTCTTCTTCC TCCCCCCCATTCATTCGATCTGTTGTTTTGGAAAAa ]
[+] EMBL BM421634 [ CGATCAGTACCCGCGC ATCACCAGGTGCTCA CTGATCCCTAC CCGTGCACAAGCCA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACACTTGCA GGAGGCGCTCGACA GGTT CCGCCAGCATGAGA GCTTGATGAACTGATGAAAGCTCAAGCCCC CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTAC CCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGA ]
[-] EMBL CB680319 [ GATCAGTACCCGCGCA ATCACCAGGTGCTCA CTGATCCCTACGCCGTGCACAAG CA AGGCTGGGACGCGCT CAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACA GGTT CA AGAAGACA TTGCA GGAGGCGCTCGACA GGTTGCCGCCAGCATGAGA GCTTGATGAACTGATAAAAGCTCAAGCCCA CGA GGT GGTGGTGGTGGTGGTGGTA GATAGATA GGTTGGTGTATCTAT CTGTG CCTTCT CTTGCTTAACTTA TTTTTCCTTTTGAAATTCTT TTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTT ACATATGCCTAGCTGATGA GTAATTTATACCCT TTGT GATTATTAATTGGTTGTTTATTTGCAAGTAAATGTCAAGATACAAAATTGTGGATTA ]
consensusID : consensus_15712#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1437 fasta sequence
[CGAGTCTCCCCTTCTCAGCCAGCTTCGCCTCGCTCGCTAGCTATCCATCTCTTCCTCCTCTTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGGTTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGAGCAAGAGGAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGATCCTGAGGTCTCCGCCACCCCTGCCGTCTGGGTCACCGCCGCGGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACGTGCCGCATGACAAGCAATCGGTCGGAGCGGTGCGAGGCGACAGGGGACATTCGTGTGGAGGGGAACACGAACACCATCTACATCAGCGGGATCGACTAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGAT-GGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCACCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGGTCACCTA]
[+] EMBL CB680318 [CGAGTCTCCCCTTCTCAGCCAGCTTCGCCTCGCTCGCTAGCTATCCATCTCTTCCTCCTCTTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGGTTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGAGCAAGAGGAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGATCCTGAGGTCTCCGCCACCCCTGCCGTCTGGGTCACCGCCGCGGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACGTGCCGCATGACAAGCAATCGGTCGGAGCGGTGCGAGGCGACAGGGGACATTCGTGTGGAGGGGAACACGAACACCATCTACATCAGCGGGATCGACTAGGAGTGGAAGAC ]
[+] EMBL AK065605 [ CAGCCAGCTTCGCCTCGCTCGCTAGCTATCCATCTCTTCCTCCTCTTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGGTTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGAGCAAGAGGAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGAGCCTGAGGTCAGCGCCACCCCTGCCGTCGTGGTCACCGCCGCAGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACCTGCCGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGGAACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGAT GGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCACCACTGTCACCTTCAAGAATCCGGCGAAAGACATGGAGGTCACCTA]
[+] EMBL AU093502 [ GTGGCCGGAGTTTGAGCTGGGCCCGCCGGCGGCGAGATGAAGCAGTCGATGCGGA CCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAGGATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGANCAAGAGGAGGACGANGAGGAGGAGAGCTCTGGCGGTTGCGG ]
[+] EMBL CA755671 [ AGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGC GCGCCCCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAGATGGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCACACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCATGGTGCTGGGCTCACC ACATGGTG TCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTGCCATTCGGCGGCCTAGAGTGGCTCA CACTGTCACCTTCAAGAATCC GCGAAAGACATGGAGGTCACCTA]
consensusID : consensus_15712#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 759 fasta sequence
[GATGCATAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCGACCTGCCGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGGAACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGNTGCTAATC]
[+] EMBL CB659063 [GATGCATAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCGACCTGCCGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGGAACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGCAAGCCACGGNTGCTAATC]
[+] EMBL AU032406 [ CTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCGCGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGANTTCACCCTCAAGCCGGTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTTGGCG CAACTTTCACAAGGACATGGGCGTGGA CCCAAGCG ]
[+] EMBL AU174827 [ GTCACCGAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGCGGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGCACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTGAACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAACGACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATGGGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTCCGCCGCGCCTTCGGGCTGGAGCGCGTCGC ]
consensusID : consensus_15712#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence
[GGAGAGCTCTCTGATCGATCGTACCCGCCAAATCACCAGGTGCTCACTGATCCCTACCCGTGCACAACAAGCTGGGACGCGCTCAAGACGGCAGTACCTGGACATACAAGAACATCAAGATGGACATGGACAGGTTCAAGAAGACATTTCCAGGAGGCGCTCGACAGGTTCCGCCAGCATGAGAGCTTGATGAACTGATGAAAGCTCAAGCCCACGAGGTGGTGGTGGTGGTGGTGGTAGATAGATAGTTGGTGTATCTATCTGTGCCTTCTCTTGCTTAACTTATTTTTCCTTTTGAAATTCTTTTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTTACATATGCCTAGCTGATGAGTAATTTATACCCTTTGTGATTTAAAAAAAAAA]
[+] EMBL BI812657 [GGAGAGCTCTCTGATCGATCGTACCCGCCAAATCACCAGGTGCTCACTGATCCCTACCCGTGCACAACAAGCTGGGACGCGCTCAAGACGGCAGTACCTGGACATACAAGAACATCAAGATGGACATGGACAGGTTCAAGAAGACATTTCCAGGAGGCGCTCGACAGGTTCCGCCAGCATGAGAGCTTGATGAACTGATGAAAGCTCAAGCCCACGAGGTGGTGGTGGTGGTGGTGGTAGATAGATAGTTGGTGTATCTATCTGTGCCTTCTCTTGCTTAACTTATTTTTCCTTTTGAAATTCTTTTTACGCCTTCTTCTTCCTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAACATCATGTTACATATGCCTAGCTGATGAGTAATTTATACCCTTTGTGATTTAAAAAAAAAA]
consensusID : consensus_15712#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 168 fasta sequence
[ATGCCTGGTTGGTTTTTTGGGAAAAAAGAAAATAAAAGGAGGGATGGAACAAGAACATCATGTTACATATGGCCTACTGATGAGTAATTTATACCCTTTGTGGATTATTAATTGGTTGTTTATTTACAAGTAAATGTCAAGATACCAAATTGTGGATTAAAAAAAAAA]
[+] EMBL BI813181 [ATGCCTGGTTGGTTTTTTGGGAAAAAAGAAAATAAAAGGAGGGATGGAACAAGAACATCATGTTACATATGGCCTACTGATGAGTAATTTATACCCTTTGTGGATTATTAATTGGTTGTTTATTTACAAGTAAATGTCAAGATACCAAATTGTGGATTAAAAAAAAAA]
consensusID : consensus_15712#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 166 fasta sequence
[TAACATGATGTTCTTGTTCATCCNCTTTTTTTCTTTTCCAAAACAACAGATCAAATGAATGGNNCCAAAGGNAGTNGAAGGCGTAAAAGGAATNGCAAAAGGNNAATCAAGNTANGCANGNGATGGNACNGNTTAGGTTNACCAACCCATCCTNACNACCNACACC]
[+] EMBL D42953 [TAACATGATGTTCTTGTTCATCCNCTTTTTTTCTTTTCCAAAACAACAGATCAAATGAATGGNNCCAAAGGNAGTNGAAGGCGTAAAAGGAATNGCAAAAGGNNAATCAAGNTANGCANGNGATGGNACNGNTTAGGTTNACCAACCCATCCTNACNACCNACACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CGAGTCTCCCCTTCTCAGCCAGCTTCGCCTCGCTCGCTAGCTATCCATCTCTTCCTCCTC 60
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 --------------TCAGCCAGCTTCGCCTTGCTCGCTAGCTATCCATCTCTTCCTCCTC 46
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 TTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGG 120
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 TTCTTCTCCCTTCCCTTGTTTGCTTGGAAGGAGAGGGGGAAGAAAAGTAGGAGGACGCGG 106
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 TTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGG 180
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 TTGCGGGTTGGTCCAGATCTAGGGCAAGGCGGTGGCCGGAGTTTGAGCTGGGCCCGCCGG 166
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGT 240
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CGGCGAGATGAAGCAGTCGATGCGGAGCCGGCAGGAGCCGCGGCGGGTGAGCAACGGCGT 226
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTG 300
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CATCATCGCCGCCATGCTGCTCTCCCTCTGCGTCCTCAGCATCGTCAAGGCCAGATACTG 286
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAG 360
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CTCCACCCCCTTCGTTAAGCCCGACGACCAGCTACAGGAGCAGATGAACTCCAGCATCAG 346
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GATGGAGACCGACGAGCCGGCGACCATGGCGGC--------------------------- 393
consensus_15712#2 ------------------GATG--CATAGTCGA--------------------------- 13
consensus_15712#0 GATGGAGACCGACGAGCCGGCGACCATGGCGGCGGGAGGTTCGTCCTCGCCCTCGCTAGC 406
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 -----------------------------------------------GGGAGAGCAAGAG 406
consensus_15712#2 -----------------------------------------------TGCGGAGCCGGCA 26
consensus_15712#0 TCTCCGGATTGTGTGTGATTTGTGCTCAACGAGTGCGTTCTTGAATTTGCAGAGCAAGAG 466
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGATCCTGAGGTCTCCGCCACC 466
consensus_15712#2 GGAGCCGCGGCGGGTGAG-----CAACGGCGTCATCATCGCCGCCATGCTGCTCTCCCTC 81
consensus_15712#0 GAGGACGAGGAGGAGGAGAGCTCTGGCGGTGGCGGCGCTGAGCCTGAGGTCAGCGCCACC 526
consensus_15712#3 ----------------------------------------------------GGAGAGCT 8
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CCTGCCGTCTGGGTCACCGCCGCGGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACGTGC 526
consensus_15712#2 TGCGTCCTCAGCATCGTCAAGGCCAGATACTGCTCCACCCCCTTCGTTAAGCCGACCTGC 141
consensus_15712#0 CCTGCCGTCGTGGTCACCGCCGCAGCCGGCGGCGGCGGCGGCAAGAGGAAGCCGACCTGC 586
consensus_15712#3 CTCTGATCGATCGTACCCGCCAAATCACCAGGTGCTCACTGATCCCTACCCGTGCACAAC 68
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CGCATGACAAGCAATCGGTCGGAGCGGTGCGAGGCGACAGGGGACATTCGTGTGGAGGGG 586
consensus_15712#2 CGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGG 201
consensus_15712#0 CGCATGACGAGCAAGCGGTCGGAGCGGTGCGAGGCGAGAGGGGACATTCGTGTGGAGGGG 646
consensus_15712#3 AAGCTGGGACGCGCTCAAGACGGCAGTACCTGGACATACAAGAACATCAAGATGGACATG 128
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 AACACGAACACCATCTACATCAGCGGGATCGACTAGGAGTGGAAGACGAAGCCGTACGCG 646
consensus_15712#2 AACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCG 261
consensus_15712#0 AACGCGTCCACCATCTACATCGGCGGGATCGACAAGGAGTGGAAGACGAAGCCGTACGCG 706
consensus_15712#3 GACAGGTTCAAGAAGACATTTCCAGGAGGCGCTCGACAGGTTCCGCCAGCATGAGAGCTT 188
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACC 706
consensus_15712#2 CGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACC 321
consensus_15712#0 CGGTACCACGACCCCGTCGCCATGGCCGTCGTCCGCGAGTTCACCCTCAAGCCGGTCACC 766
consensus_15712#3 GATGAACTGATGAAAGCTCAAGCCCACGAGGTGGTGGTGGTGGTGGTGGTAGATA--GAT 246
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGC 766
consensus_15712#2 GAGTCGTCGCCGGCGTGCACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGC 381
consensus_15712#0 GAGTCGTCGCCGGCGTGTACCAGGAACCACTCGGTCCCGGCCTTCGTCTTCTCCAACGGC 826
consensus_15712#3 AGTTGGTGTATCTATCTGTGCCTTCTCTTGCTTAACTTATTTTTCCTTTTGAAATTCTTT 306
consensus_15712#5 --------------------------------TAACATGATGTTCTTGTTCATCCNCTTT 28
consensus_15712#4 -------------------------------ATGCCTGGTTGGTTTTTTGGGAAAAAAGA 29
consensus_15712#1 GGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGC 826
consensus_15712#2 GGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGC 441
consensus_15712#0 GGCTTCTCCGGCAACCTGTACCACGACTACACCGACGTGCTCGTGCCGCTGTTCCTCAGC 886
* * *
consensus_15712#3 TTACGCCTTCTTCTTCCTTTAGCAACATTCATTTG-----------ATCTGTTGTTTTGG 355
consensus_15712#5 TTTTCTTTTCCAAAACAACAGATCAAATGAATGGN-----------NCCAAAGGNAGTNG 77
consensus_15712#4 AAATAAAAGGAGGGATGGAACAAGAACATCATGTT-----------ACATATGGCCTACT 78
consensus_15712#1 ACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTG 886
consensus_15712#2 ACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTG 501
consensus_15712#0 ACCCACCAGTTCAAGGGCCAGGTGCAGTTCTTGCTCAGTGGGCTCAAGCCATGGTGGGTG 946
* *
consensus_15712#3 AAAAGAA--AAAAAGAGGATGAACAAGAACATCAT----GTTACATATG-CCTAGCTGAT 408
consensus_15712#5 AAGGCGT--AAAAGGAATNGCAAAAGGNNAATCAA----GNTANGCANG-NGATGGNACN 130
consensus_15712#4 GATGAGT--AATTTATACCCTTTGTGGATTATTAATTG-GTTGTTTATT-TACAAGTAAA 134
consensus_15712#1 AACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAAC 946
consensus_15712#2 AACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAAC 561
consensus_15712#0 AACAAGTTCAACCTCTTCTTCAGGCAGCTCACCAAGTACGACATCCTCGACATCGACAAC 1006
* ** * * * *
consensus_15712#3 GAGTAATTTATACCCTTTGTGATTTAAAAAAAAAA------------------------- 443
consensus_15712#5 GNTTAGGTTNACCAACCCATCCTNACNACCNACACC------------------------ 166
consensus_15712#4 TGTCAAGATACCAAATTGTGGATTAAAAAAAAAA-------------------------- 168
consensus_15712#1 GACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATG 1006
consensus_15712#2 GACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATG 621
consensus_15712#0 GACAAGGACGTGCACTGCTTCCCCCGGATCGTGGTCGGCGCCACCTTCCACAAGGACATG 1066
* *
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTC 1066
consensus_15712#2 GGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTC 681
consensus_15712#0 GGCGTGGACCCCAAGCGCTCGCCGGGGCACGTCTCGGTGGTGGACTTCAAGCGCGCGCTC 1126
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGC 1126
consensus_15712#2 CGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTCCCGAGGCGGCGCCACGGGGAACGGC 741
consensus_15712#0 CGCCGCGCCTTCGGGCTGGAGCGCGTCGCGGCGTACCGAGGCGGCGCCACGGGGAACGGC 1186
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 AAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAG 1186
consensus_15712#2 AAGCCACGGNTGCTAATC------------------------------------------ 759
consensus_15712#0 AAGCCACGGTTGCTAATCATTTCCCGCAAGAACTCGCGGCGGTTCCTCAATGAGCGGGAG 1246
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ATGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCAC 1246
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 ATGGCGCAGGCCGCTGCCGCTGTGGGCTTCGAGGTGCGCATTGCCGAGCCCGATCAGCAC 1306
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCAT 1306
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 ACCGACATGTCCACATTCGCCCAGCTCGTCAATTCCGCCGATGTCATGATCGGTGTCCAT 1366
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTG 1366
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 GGTGCTGGGCTCACCAACATGGTGTTCCTCCCCCGCGGCGCCGTCCTCATCCAGGTGGTG 1426
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 CCATTCGGCGGCCTAGAGTGGCTCACCACTGTCACCTTCAAGAATCCGGCGAAAGACATG 1426
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CCATTCGGCGGCCTAGAGTGGCTCACCACTGTCACCTTCAAGAATCCGGCGAAAGACATG 1486
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 GAGGTCACCTA------------------------------------------------- 1437
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 GAGGTCACCTACATGGATTACAATGTCCAGCTGGAGGAGAGCTCGCTGATCGATCAGTAC 1546
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CCGCGCAATCACCAGGTGCTCACTGATCCCTACGCCGTGCACAAGCAAGGCTGGGACGCG 1606
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CTCAAGACGGCGTACCTGGACAAGCAGAACATCAAGATGGACATGGACAGGTTCAAGAAG 1666
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 ACATTGCAGGAGGCGCTCGACAGGTTGCCGCCAGCATGAGAGCTTGATGAACTGATGAAA 1726
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 GCTCAAGCCCACGAGGTGGTGGTGGTGGTGGTGGTAGATAGATAGGTTGGTGTATCTATC 1786
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 TGTGCCTTCTCTTGCTTAACTTATTTTTCCTTTTGAAATTCTTTTTACGCCTTCTTCTTC 1846
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CTTTAGCAACATTCATTTGATCTGTTGTTTTGGAAAAGAAAAAAAGAGGATGAACAAGAA 1906
consensus_15712#3 ------------------------------------------------------------
consensus_15712#5 ------------------------------------------------------------
consensus_15712#4 ------------------------------------------------------------
consensus_15712#1 ------------------------------------------------------------
consensus_15712#2 ------------------------------------------------------------
consensus_15712#0 CATCATGTTACATATGCCTAGCTGATGAGTAATTTATACCCTTTGTGATTATTAATTGGT 1966
consensus_15712#3 --------------------------------------------------
consensus_15712#5 --------------------------------------------------
consensus_15712#4 --------------------------------------------------
consensus_15712#1 --------------------------------------------------
consensus_15712#2 --------------------------------------------------
consensus_15712#0 TGTTTATTTAAAAATAAATGTCAAGATACAAAATTGTGGATTAAAAAAAA 2016
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||