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Oryza sativa
cluster # 15729 cluster # 15729       Sequences # 24       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15729#0 length = 1333 sequences # 3  
consensus_15729#1 length = 1321 sequences # 17  
consensus_15729#2 length = 543 sequences # 3  
consensus_15729#3 length = 515 sequences # 1  

consensusID : consensus_15729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1333
fasta sequence
                              [GCTCGCTCCCTTAAAGAGTCCCATGGCGGAAGCCGACGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGGGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCTGGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAGCAGAATCAATTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTGTGGCTGGTGAAGAGCAAGCACAGGATGCTAGGCAACAACATGGCCCTCAGAGACAAGTTGTTGTGAGGAGGTTTCACTTTGCTTTTCAGCTTGACTTGGCCCTGATCATCAAGTTAGCAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTGTGAGTGCCCTGCTTACTTCCTTGCCCAATCGCTTTTTTTGACTTGTTTTGTTTAGTTCATTGTATGTCGTTACATTTGGGTTGTTCCATCTCTTGCAGATATCAAACTGGCGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTG-CCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATAGGGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAACTGTTTGTATGTGTTGGTTGTTGATTGTCATGTCCTAAAAAAAAAAAAA]

[+] EMBL CB646064             [GCTCGCTCCCTTAAAGAGTCCCATGGCGGAAGCCGACGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGGGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCTGGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAGCAGAATCAATTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTGTGGCTGGTGAAGAGCAAGCACAGGATGCTAGGCAACAACATGGCCCTCAGAGACAAGTTGTTGTGAGGAGGTTTCACTTTGCTTTTCAGCTTGACTTGGCCCTGATCATCAAGTTAGCAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTGTGAGTGCCCTGCTTACTTCCTTGCCCAATCGCTTTTTTTGACTTGTTTTGTTTAGTTCATTGTATGTCGTTACATTTGGGTTGTTCCATCTCTTGCAGATATCAAACTGGCGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB646065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aAAGGGCTGTTCTTTTTCATACTGTTTGCCTCAGTGATTTACTTGTGAGTGCCCTGCTTACTTCCTTGCCCAATCGCTTTTTTTGACATGTTTTGTTTAGTTCATTGTATGTCGTTACATTTGGGTTGTTCCATCTCTTGCAGATATCAAACTGGCGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATAGGGAATAATATGACTATATATG                                                                                                                                    ]
[+] EMBL C97573               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAATCGT NTCCGCTAGCTGCCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGG TTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATCTAGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAACTGTTTGTATGTGTTGGTTGTTGATTGTCATGTCCTAAAAAAAAAAAAA]


>consensus_15729#0 GCTCGCTCCCTTAAAGAGTCCCATGGCGGAAGCCGACGCGCAAACCCAGAGCCGCGCCCA CTCCTCGACGGCGGCGCCGGTGGCGGGGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCA GAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGAC GGGTATGCATCCTCAGCAGAGCCTGGATGATCAGGCTCAGGGTCCAGGGATCTATGCCAT ACAGCAGAATCAATTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGA AAGTGTCGGTGCTGTGGCTGGTGAAGAGCAAGCACAGGATGCTAGGCAACAACATGGCCC TCAGAGACAAGTTGTTGTGAGGAGGTTTCACTTTGCTTTTCAGCTTGACTTGGCCCTGAT CATCAAGTTAGCAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTT TCTTCTCATACTGTTTGCCTCAGTGATTTACTTGTGAGTGCCCTGCTTACTTCCTTGCCC AATCGCTTTTTTTGACTTGTTTTGTTTAGTTCATTGTATGTCGTTACATTTGGGTTGTTC CATCTCTTGCAGATATCAAACTGGCGCAATTACACCTTTACTAAGATGGCTGCAGCGAGC AGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCT AGCTGCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAA CAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCA AGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCA ATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAG CTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCG TGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGT GGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCA TGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATAGGGAATAATATGACTATATAT GACTTGAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACA GACCGTATGTAAAATGTGATTGAACTGTTTGTATGTGTTGGTTGTTGATTGTCATGTCCT AAAAAAAAAAAAA



consensusID : consensus_15729#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1321
fasta sequence
                              [TTTGGGTGGGTCAGATCGAACCCGCAGAACACCGAGCTCGCTCTCGCGGCGTCTCCCATGGCGGAAG-CG-A-CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG-GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT-GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC-AGC-AGAA-TCAA-TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC-TGTGGC-TGGTGAAGAGCAAGCAC-AGGATGC-TAGGCAACAACAT-GGCCCT-CAGA-GAC-AAG-TTG-TT-G-TG-AGGAGG-TTTCA-C-TTTGC-TTTTC-AGCTTGACTT-GGCCCT-GAT-CATC-AAGTTAG-CAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGAT-CAAAACAAAGG-CTGTTT-CTTCTCATACTG-TTTGCCT-CAG-TGA-TTTACTTATAT-CAAACTGG-CGCAATTA-CACCTTTACTAAGATGGCTGCAG-CGAG-CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG-CCCAGAGAAT-CGTGCTCCGCTAGCTG-CCCAGAATGATGGCAATGTT-CAACCGCCTGGGGG-AAATCTTGCAGACCCAGCAAACAATGACCAAGCTG-CAGAGAACCAGGAACCA-GGGGCAGCAGCTGCTAATGAGAACCAG-CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT-CCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAAATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATCTAGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAACTGTTTGTAGGTGTTGGTTGTTGATTGTCATGTCCTAGCAGATATGACCGTATGAGGTTTGATTTGCTACTCACCACAAAGATCTATAATCTTCTGTTGTAA]

[+] EMBL AK072824             [TTTGGGTGGGTCAGATCGAACCCGCAGAACACCGAGCTCGCTCTCGCGGCGTCTCCCATGGCGGAAGCCG A CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGC TAGGCAACAACAT GGCCCT CAGA GAC AAG TTG TT G TG AGGAGG TTTCA C TTTGC TTTTC AGCTTGACTT GGCCCT GAT CATC AAGTTAG CAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGAT CAAAACAAAGG CTGTTT CTTCTCATACTG TTTGCCT CAG TGA TTTACTTATAT CAAACTGG CGCAATTA CACCTTTACTAAGATGGCTGCAG CGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG CCCAGAGAAT CGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAACCAGGAACCA GGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACGAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATCTAGAATAATATGACTAT                                                                                                                                                                                              ]
[+] EMBL CF329224             [                                 GAGCTCGCTCTCGCGGCGTCTCCCATGGCGGAAGCCG A CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGTG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATGCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGC TAGGCAACAACAT GGCCCT CAGA GAC AAG TTG TT G TGAAGGAGG TTTCA C TTTGC TTTTC AGCTTGACTT GGCCCT GAT CATC AAGTTAG CAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGAT CAAAACAAAGG CTGTTT CTTCTCATACTG TTTGCCT CAG TGA TT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C28231               [                                    CTCGCTCTCGCGGCGTCTCCCATGGCGGAAG CG A CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATAACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGC TAGGCAACAACAT GGCCCT NAGA GAC AAG TTN TT GTTA AGGGGG TTTCA C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU065369             [                                        CTCTCGCGGCGTCTCCCATGGCGGAAG CG ANCGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGTNGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGCTTAGGCAACAACAT GGCCCT CAGAGGAC AAGTTTG TTNT TG AGGAGGTTTTCANT TTTGC TTTTtcaagt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSC109031            [                                        CTCTCGCGGCGTCTCCCATGGCGGAAG CG ANCGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGTNGGCGGGNGGAGACGGCCGNCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATNACGGGTATGCATCCTCAGCAGAGCCTGGGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAAGCAAGAATTCAATTTCATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS13034A            [                                         TCTCGCGGCGTCTCCCATGGCGGAAG CG A CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTTGTGGC TGGTGAAGAGCAAGCACAAGGATGCTTAGGCAACAACATGGGCCCT CAGA GACAAAG TTGTTT G TG AGGAGG TTTCA CTTTTGCTTTTTCAAGTTTGACTTGGGCCCTNGAT CATCAAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSS13558A            [                                         TCTCGCGGCGTCTCCCATGGCGGAAG CG A CGGGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGANACGGCCGNCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTNATGTTTCCGGTGATGTACCCTATGCTTATAACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TNGTGAAGANCAAGCAC AGGATGC TAGGNAACAACAT GGCCCT CAGA GAC AAG TTG TT G TGAAGGAGG GTTCA N TTTGC TTTTC AGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU096424             [                                         TCTCGCGGCGTCTCCCATGGCGGAAGCCGNA CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCG CNGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCA GGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS12911A            [                                          CTCGCGGCGTCTCCCATGGCGGAAG CG ANCGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGNTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTTGTGGCTTGGTGAAGAGCAAGCAC AGGATGCTTAGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF325329             [                                                                AAGCCG A CGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGC TAGGCAACAACAT GGCCCT CAGA GAC AAG TTG TT G TG AGGAGG TTTCA C TTTGC TTTTC AGCTTGACTT GGCCCT GAT CATC AAGTTAG CAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGAT CAAAACAAAGG CTGTTT CTTCTCATACTG TTTGCCT CAG TGA TTTACTTATAT CAAACTGG CGCAATTA CACCTTTACTAAGATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BQ529593             [                                                                                          GCGCCCACTCCTCGACGGCGGCGCCGGTGGCGGG GGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTTTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCT GGATGATCAGGCTCAGGGTCCAGGGATCTATGCCATAC AGC AGAA TCAA TTCATGGGGAGTACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGC TGTGGC TGGTGAAGAGCAAGCAC AGGATGC TAGGCAACAACAT GGCCCT CAGA GAC AAG TTG TT G TG AGGAGG TTTCA C TTTGC TTTTC AGCTTGACTT GGCCCT GAT CATC AAGTTAG CAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGAT CAAAACAAAGG CTGTTT CTTCTCATACTG TTTGCCT CAG TGA TTTACTTATAT CAAACTGG CGCAATTA CACCTTTACTAAGATGGCTGCAG CGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG CCCAGAGAAT CGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGC AACAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU096425             [                                                                                                                                                                                                                                                                                                                                                                                                                     CCCTCCAGA GAC AAG TTG TT G TG AGGAGG TTTCA C TTTGC TTTTC AGCTTGACTT GGCCNT GATCCTTC AAGTTAGCCAGCAGTTGTCTTTCTGTTTAGCCAGGAAGGATCCAAAACAAAGG CTGTTT CTTCTCATACTG TTTGCCT CAG TGA TTTACTTATAT CAAACTGG CGCAATTA CACCTTTACTAAGATGGCTGCAG CGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG CCCAGAGAATCCGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCCAGAGAACCAGGAACCA GGGGCAGCAGCTGCTAATGAGAACCAGCCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTNCCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAA                                                                                                                                                                                                                                                       ]
[+] EMBL AU032648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAACAAAGGCCTGTTTCCTTCTCATACTGTTTTGCCTCCAGTTGATTTTACTTATATCCAAACTGGCCGCAATTACCACCTTTACTAAGATGGCTGCAGCCGAGCCAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCCAGAGAATCCGTGCTCCGCTAGCTGCCCCAGAATGATGGCAATGTTCCAACCGCCTGGGGGAAAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAACCAGGAACCAGGGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAA                                                                                                                                                                                                                                                       ]
[-] EMBL CF329225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCT CAG TGA TTTACTTATAT CAAACTGG CGCAATTA CACCTTTACTAAGATGGCTGCAG CGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG CCCAGAGAAT CGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAACCAGTAACCA GGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCACCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCGCAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTAaaaaaaa                                                                                                                                                                                                                                                                          ]
[-] EMBL CB630177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       G CGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCG CCCAGAGAAT CGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAACCAGGAACCA GGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTCACTATCTAGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAACTGTTTGTAGGTGTTGGTTGTTGATTGTCATGTCCTAGCAGATATGACCGTATGAGGTTTGATTTGCTACTCACCACAAAGATCTATAATCTTCTGTTGTAA]
[+] EMBL AU096235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGAATGATGGCAATGTT CAACCGCCTGGGGG AAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAACCAGGAACCA GGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAA                                                                                                                                                                                                                                                       ]
[+] EMBL AU096346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACCA GGGGCAGCAGCTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGG TTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTT CCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAA                                                                                                                                                                                                                                                       ]


>consensus_15729#1 TTTGGGTGGGTCAGATCGAACCCGCAGAACACCGAGCTCGCTCTCGCGGCGTCTCCCATG GCGGAAGCGACGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCGG GGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCTT TGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCTGG ATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAGCAGAATCAATTCATGGGGAGTA CTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTGTGGCTGGTGAAG AGCAAGCACAGGATGCTAGGCAACAACATGGCCCTCAGAGACAAGTTGTTGTGAGGAGGT TTCACTTTGCTTTTCAGCTTGACTTGGCCCTGATCATCAAGTTAGCAGCAGTTGTCTTTC TGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTTTCTTCTCATACTGTTTGCCTCAGTGA TTTACTTATATCAAACTGGCGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAG GTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTG CCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATG ACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAG TCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGA TTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAAT CCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAAC AGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGT TGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAAATGAGT ATATGACTTGCTGGGAGTTACCACTTTCACTATCTAGAATAATATGACTATATATGACTT GAAGAACTTGGGTCTTTCCATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCG TATGTAAAATGTGATTGAACTGTTTGTAGGTGTTGGTTGTTGATTGTCATGTCCTAGCAG ATATGACCGTATGAGGTTTGATTTGCTACTCACCACAAAGATCTATAATCTTCTGTTGTA A



consensusID : consensus_15729#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 543
fasta sequence
                              [ACCAGAAGGATCAAAACAAAGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTATATCAAACTGGCGCAATTACACCTTTACTAAGATTGCTGCAGCGAC-CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCT-GCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTG-CAGAGAA-CCAGGAACCAGGGGCAGCAG-CTGCTAATGAGAACCAG-CAAGAAGTCGATGGAGAAGGGAACAGGCGC-ATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCAC-ATGA-CTAGAGCTAATCCCATCACTGCCTAATCTTCCATT-G-CAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAA-CAGCAC-AAGAAGAGTTTGTTATAGAACAAAAATGGTGGCGTTGTTAAATAAAAAAAAAA]

[+] EMBL BI799091             [ACCAGAAGGATCAAAACAAAGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTATATCAAACTGGCGCAATTACACCTTTACTAAGA TGCTGCAGCGAG CAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCT GCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAAC ATGACCAAGCTG CAGAGAA CCAGGAACCAGGGGCAGCAG CTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCC ATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCAC ATGACCTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGG CAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAATGGTGGCGTTGTTAAATAAAAAAAAAA]
[+] EMBL BI799639             [                                                                                cCCTTTACTAAGATGGCTGCAGCGACGCAGGAGGTGCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTCGCCCAGAATGATGCCAATGTTCAACCGCCTGGGGGAAATCTTCCAGACCCAGCAAACAATGACCAAGCTGCCAGAGAACCCAGGAACCAGGGCCACCAGCCTGCTAATGAGAACCAGCCAAGAAGTCGATGGAGAAGGGAACAGGCGC ATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCAC ATGA CTAGAGCTAATCCCATCACTGCCTAATCTTCCATT GCCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAA CAGCAC AAGAAGAGTTTGTTATAGAACAAAAATGGTGGCGTTGTTAAATAAAAAAAAAA]
[+] EMBL BI798250             [                                                                                           GATTGCT CAGCGAC CAGGA GT CT CTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTA CT GCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTG CAGAGAA CCAGGAACCAGGGGCAGCAG CTGCTAATGAGAACCAG CAAGAAGTCGATGGAGAAGGGAACAGGCGC ATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTA GGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGA CTAGAGCTAATCCCATCACTGCCTAATCTTCCATT G CAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAA CAGCAC AAGAAGAGTTTGTTATAGCACAAAAATGGTGGCGTTGTTAAATAAAAAAAAA ]


>consensus_15729#2 ACCAGAAGGATCAAAACAAAGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTA TATCAAACTGGCGCAATTACACCTTTACTAAGATTGCTGCAGCGACCAGGAGGTGCTGCT GCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTGCCCAGAAT GATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCT GCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGA GAAGGGAACAGGCGCATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAG GGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACATGACTAGAGCTAATCCCATCACTG CCTAATCTTCCATTGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGT ACAACAGCACAAGAAGAGTTTGTTATAGAACAAAAATGGTGGCGTTGTTAAATAAAAAAA AAA



consensusID : consensus_15729#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 515
fasta sequence
                              [GCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTNTCCGCTAGCTGCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTAAAAAAAAAAA]

[+] EMBL AU092129             [GCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTNTCCGCTAGCTGCCCAGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTTACCACTTTAAAAAAAAAAA]


>consensus_15729#3 GCTGCTGCTCGTCCTCCACAGGCTCCAGCTCGCCCAGAGAATCGTNTCCGCTAGCTGCCC AGAATGATGGCAATGTTCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACC AAGCTGCAGAGAACCAGGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCG ATGGAGAAGGGAACAGGCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTG TTGTAGGGTTTGTTGCATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCC ATCACTGCCTAATCTTCCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGA AAAATGGTACAAAGCAGCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGT TAATATTGTTTTCTTCCAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATA TGACTTGCTGGGAGTTACCACTTTAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15729#0      -----------------------------------GCTCGCTCCCTTAAAGAGTCCCATG 25
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      TTTGGGTGGGTCAGATCGAACCCGCAGAACACCGAGCTCGCTCTCGCGGCGTCTCCCATG 60
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      GCGGAAGCCGACGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCG 85
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      GCGGAAGC-GACGCGCAAACCCAGAGCCGCGCCCACTCCTCGACGGCGGCGCCGGTGGCG 119
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      GGGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCT 145
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      GGGGAGACGGCCGGCGAACCAGTCGGGTTTCCCCAGAATGGCGCTATAAATGGGGCTCCT 179
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      TTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCTG 205
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      TTGATGTTTCCGGTGATGTACCCTATGCTTATGACGGGTATGCATCCTCAGCAGAGCCTG 239
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      GATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAGCAGAATCAATTCATGGGGAGT 265
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      GATGATCAGGCTCAGGGTCCAGGGATCTATGCCATACAGCAGAATCAATTCATGGGGAGT 299
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      ACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTGTGGCTGGTGAA 325
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      ACTCTCATGCCACTCACTTACAGGATTCCAACGGAAAGTGTCGGTGCTGTGGCTGGTGAA 359
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      GAGCAAGCACAGGATGCTAGGCAACAACATGGCCCTCAGAGACAAGTTGTTGTGAGGAGG 385
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      GAGCAAGCACAGGATGCTAGGCAACAACATGGCCCTCAGAGACAAGTTGTTGTGAGGAGG 419
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      TTTCACTTTGCTTTTCAGCTTGACTTGGCCCTGATCATCAAGTTAGCAGCAGTTGTCTTT 445
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      TTTCACTTTGCTTTTCAGCTTGACTTGGCCCTGATCATCAAGTTAGCAGCAGTTGTCTTT 479
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      CTGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTTTCTTCTCATACTGTTTGCCTCAGTG 505
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      CTGTTTAGCCAGGAAGGATCAAAACAAAGGCTGTTTCTTCTCATACTGTTTGCCTCAGTG 539
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      ATTTACTTGTGAGTGCCCTGCTTACTTCCTTGCCCAATCGCTTTTTTTGACTTGTTTTGT 565
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      ATTTACTT---------------------------------------------------- 547
consensus_15729#2      -------------------------------------------------ACCAGAAGGAT 11
                                                                                   

consensus_15729#0      TTAGTTCATTGTATGTCGTTACATTTGGGTTGTTCCA-TCTCTTGCAGATATCAAACTGG 624
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      ------------------------------------------------ATATCAAACTGG 559
consensus_15729#2      CAAAACAAAGCTGTTTCTTCTCATACTGTTTGCCTCAGTGATTTACTTATATCAAACTGG 71
                                                                                   

consensus_15729#0      CGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAGGTGCTGCTGCTCGTCCTCC 684
consensus_15729#3      -------------------------------------------GCTGCTGCTCGTCCTCC 17
consensus_15729#1      CGCAATTACACCTTTACTAAGATGGCTGCAGCGAGCAGGAGGTGCTGCTGCTCGTCCTCC 619
consensus_15729#2      CGCAATTACACCTTTACTAAGATTGCTGCAGCGACCAGGAGGTGCTGCTGCTCGTCCTCC 131
                                                                  *****************

consensus_15729#0      ACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTGCCCAGAATGATGGCAATGT 744
consensus_15729#3      ACAGGCTCCAGCTCGCCCAGAGAATCGTN-TCCGCTAGCTGCCCAGAATGATGGCAATGT 76
consensus_15729#1      ACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTGCCCAGAATGATGGCAATGT 679
consensus_15729#2      ACAGGCTCCAGCTCGCCCAGAGAATCGTGCTCCGCTAGCTGCCCAGAATGATGGCAATGT 191
                       ****************************  ******************************

consensus_15729#0      TCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCA 804
consensus_15729#3      TCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCA 136
consensus_15729#1      TCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCA 739
consensus_15729#2      TCAACCGCCTGGGGGAAATCTTGCAGACCCAGCAAACAATGACCAAGCTGCAGAGAACCA 251
                       ************************************************************

consensus_15729#0      GGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAG 864
consensus_15729#3      GGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAG 196
consensus_15729#1      GGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAG 799
consensus_15729#2      GGAACCAGGGGCAGCAGCTGCTAATGAGAACCAGCAAGAAGTCGATGGAGAAGGGAACAG 311
                       ************************************************************

consensus_15729#0      GCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGC 924
consensus_15729#3      GCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGC 256
consensus_15729#1      GCGCAATTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGC 859
consensus_15729#2      GCGCA-TTGGCTTGGAGGCGTCTTTAAAGAGGTCCAATTGATTGTTGTAGGGTTTGTTGC 370
                       ***** ******************************************************

consensus_15729#0      ATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTT 984
consensus_15729#3      ATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTT 316
consensus_15729#1      ATCACTTCTCCCTGGCTTTCAGCACAATGACTAGAGCTAATCCCATCACTGCCTAATCTT 919
consensus_15729#2      ATCACTTCTCCCTGGCTTTCAGCACA-TGACTAGAGCTAATCCCATCACTGCCTAATCTT 429
                       ************************** *********************************

consensus_15729#0      CCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCA 1044
consensus_15729#3      CCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCA 376
consensus_15729#1      CCATTGGCAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAAAGCA 979
consensus_15729#2      CCATTG-CAATGTAACTGTTTATTGTGAGATAGGCGTGAACAGAAAAATGGTACAA--CA 486
                       ****** *************************************************  **

consensus_15729#0      GCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTC 1104
consensus_15729#3      GCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTC 436
consensus_15729#1      GCACAAAGAAGAGTTTGTTATAGAACAAAAAATGGTGGCGTTGTTAATATTGTTTTCTTC 1039
consensus_15729#2      GCACAA-GAAGAGTTTGTTATAGAACAAAAA-TGGTGGCGTTGTTAA-ATAAAAAAAAAA 543
                       ****** ************************ *************** **          

consensus_15729#0      CAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTT 1164
consensus_15729#3      CAAGTGCTATTGTTATATTTTGTTTCTAATGCGGCATGAGTATATGACTTGCTGGGAGTT 496
consensus_15729#1      CAAGTGCTATTGTTATATTTTGTTTCTAAAAAAAAATGAGTATATGACTTGCTGGGAGTT 1099
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      ACCACTTTCACTATAGGGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCC 1224
consensus_15729#3      ACCACTTTAAAAAAAAAAA----------------------------------------- 515
consensus_15729#1      ACCACTTTCACTATCTAGAATAATATGACTATATATGACTTGAAGAACTTGGGTCTTTCC 1159
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      ATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAA 1284
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      ATGGGCAGAAGTATGTATATTCTGCAGCCGTCAACAGACCGTATGTAAAATGTGATTGAA 1219
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      CTGTTTGTATGTGTTGGTTGTTGATTGTCATGTCCTAAAAAAAAAAAAA----------- 1333
consensus_15729#3      ------------------------------------------------------------
consensus_15729#1      CTGTTTGTAGGTGTTGGTTGTTGATTGTCATGTCCTAGCAGATATGACCGTATGAGGTTT 1279
consensus_15729#2      ------------------------------------------------------------
                                                                                   

consensus_15729#0      ------------------------------------------
consensus_15729#3      ------------------------------------------
consensus_15729#1      GATTTGCTACTCACCACAAAGATCTATAATCTTCTGTTGTAA 1321
consensus_15729#2      ------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)