cluster # 1574

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Oryza sativa
cluster # 1574 cluster # 1574 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1574#0 length = 784 sequences # 2

consensusID : consensus_1574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 784
fasta sequence

                              [GGGGCCCTGCAACCTGTAATTGGGTTATTAAGTTCCTGTTGTACGGAGAGTCAAAGAGAGGCTGCTTTGTTGCTAGGGCAGTTTGCTTCGGCTGATTCTGATTGCAAGGTCCATATTGTGCAAAGAGGTGCAGTCCGTCCGCTGATTTTAATGCTACAGTCTATCTGATGTCCAACTTAGAGAAATGTCTGCTTTTGCCCTTGGGAGGCTCGCCCAGGACCTACATAACCAAGCAGGCATTGCATATAATGGTGGTTTGGTGCCTCTACTAAAGCTTCTAGACTCAAAAAATGGATCTCTGCAACATAATGCTGCATTTGCCCTTTACGGAGTTGCTGACAACGAGGACTATGTGTCCGACTTCATTAAAGTTGGAGGTGTACAAAAGTTGCAAGATGGAGAATTTATCGTGCAGGCCACAAAGGATTGTGTAGCTAAGACCCTTAAGAGGTTAGAGGAGAAGATAAATGGACGAGTGTTAAAACACTTGCTTTATATGATGAGAGTAGGAGAAAAATCTGTGCAGAGGCGGGTTGCTCTGGCCCTGGCACACCTCTGTGCGCCTGAAGATCAAAGAACAATTTTTATTGATAATAATGGCCTTGAGTTGCTTCTTGATCTTCTGGTTTCGGTGAGCCTGAAGCATCAGCTAGATGGTTCAGTAGCACTATACAAATTGGCCAACAAAGCTGCAGCACTTTCTCCCATGGATGCTGCACCTCCATCTCCAACACCACAGGTTTAATCTTGGTGAGCAATATGTGAACAGTTCGACACTTTCAGA]

[+] EMBL CA997935             [GGGGCCCTGCAACCTGTAATTGGGTTATTAAGTTCCTGTTGTACGGAGAGTCAAAGAGAGGCTGCTTTGTTGCTAGGGCAGTTTGCTTCGGCTGATTCTGATTGCAAGGTCCATATTGTGCAAAGAGGTGCAGTCCGTCCGCTGATTTTAATGCTACAGTCTATCTGATGTCCAACTTAGAGAAATGTCTGCTTTTGCCCTTGGGAGGCTCGCCCAGGACCTACATAACCAAGCAGGCATTGCATATAATGGTGGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF324057             [                                                                                                                                                                                                                 ttGCCCAGGACACACATAACCAAGCAGGCATTGCATATAATGGTGGTTTGGTGCCTCTACTAAAGCTTCTAGACTCAAAAAATGGATCTCTGCAACATAATGCTGCATTTGCCCTTTACGGAGTTGCTGACAACGAGGACTATGTGTCCGACTTCATTAAAGTTGGAGGTGTACAAAAGTTGCAAGATGGAGAATTTATCGTGCAGGCCACAAAGGATTGTGTAGCTAAGACCCTTAAGAGGTTAGAGGAGAAGATAAATGGACGAGTGTTAAAACACTTGCTTTATATGATGAGAGTAGGAGAAAAATCTGTGCAGAGGCGGGTTGCTCTGGCCCTGGCACACCTCTGTGCGCCTGAAGATCAAAGAACAATTTTTATTGATAATAATGGCCTTGAGTTGCTTCTTGATCTTCTGGTTTCGGTGAGCCTGAAGCATCAGCTAGATGGTTCAGTAGCACTATACAAATTGGCCAACAAAGCTGCAGCACTTTCTCCCATGGATGCTGCACCTCCATCTCCAACACCACAGGTTTAATCTTGGTGAGCAATATGTGAACAGTTCGACACTTTCAGA]




>consensus_1574#0
GGGGCCCTGCAACCTGTAATTGGGTTATTAAGTTCCTGTTGTACGGAGAGTCAAAGAGAG
GCTGCTTTGTTGCTAGGGCAGTTTGCTTCGGCTGATTCTGATTGCAAGGTCCATATTGTG
CAAAGAGGTGCAGTCCGTCCGCTGATTTTAATGCTACAGTCTATCTGATGTCCAACTTAG
AGAAATGTCTGCTTTTGCCCTTGGGAGGCTCGCCCAGGACCTACATAACCAAGCAGGCAT
TGCATATAATGGTGGTTTGGTGCCTCTACTAAAGCTTCTAGACTCAAAAAATGGATCTCT
GCAACATAATGCTGCATTTGCCCTTTACGGAGTTGCTGACAACGAGGACTATGTGTCCGA
CTTCATTAAAGTTGGAGGTGTACAAAAGTTGCAAGATGGAGAATTTATCGTGCAGGCCAC
AAAGGATTGTGTAGCTAAGACCCTTAAGAGGTTAGAGGAGAAGATAAATGGACGAGTGTT
AAAACACTTGCTTTATATGATGAGAGTAGGAGAAAAATCTGTGCAGAGGCGGGTTGCTCT
GGCCCTGGCACACCTCTGTGCGCCTGAAGATCAAAGAACAATTTTTATTGATAATAATGG
CCTTGAGTTGCTTCTTGATCTTCTGGTTTCGGTGAGCCTGAAGCATCAGCTAGATGGTTC
AGTAGCACTATACAAATTGGCCAACAAAGCTGCAGCACTTTCTCCCATGGATGCTGCACC
TCCATCTCCAACACCACAGGTTTAATCTTGGTGAGCAATATGTGAACAGTTCGACACTTT
CAGA

clustalw multiple alignements is not computed in this case