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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1428 fasta sequence
[TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG-TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA-TTTCAG-GAACTCGGAGAGGCATACC-AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC-TTT-GGGATGC-TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT-CATAGCTGAGTGGGTCAGAGA-C-AAGGGCCACTGCATTAAA-TCACAGGTTAATGCCGC-TTCAGGCGC-TATCGCTCTGATGCAGCTAC-AAGAAGGGATG-AAAAAGATGGAGGAAAGTGACAAT-AAGGAGGACC-AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA-TGCTTAGTTACCTATGGAAAATTAAT-GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG-CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT-CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA--AGGA--AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA-TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT-AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA]
[+] EMBL AK071113 [TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAA ]
[+] EMBL CF314474 [ CTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAG ]
[+] EMBL AU065786 [ GGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGGTTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTNCTCAGGATAACATGGTGGATCCTGCTGCTGTCTTTT GGGATGCTTTTTTGGAAGTTACTATTTT ]
[+] EMBL OSS10218A [ GGATCGATTTTNTTNCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCANCGTGGACGGCTCCCCNGCCGAGATCAAGAAGGCCTATTANCTCAAGGCGAAGAGGG TGCATNCGGACAAGAATCCTGGGAACCCCGATNCGGCGCAGAAATTTTCAGNGAACTNGGAGGGGCATACCAAAGTT ]
[+] EMBL CB618172 [ ATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCATGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAACTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGATAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTATTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCACA A C AACGGC ]
[+] EMBL AK103912 [ CTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAA ]
[+] EMBL CF323183 [ ACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCATAAA TGTCAA GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTG ]
[+] EMBL C26296 [ CTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGGTTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTT ]
[+] EMBL AU064660 [ TCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAA NAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGC ]
[+] EMBL AU063803 [ TCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAG AGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGG TTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTTGGGGATGCTTTTTTGGAAGTGACTATTTTGAAGATTATGTTTGACAACTTTCACTTGCATCCATAGCATCAGTGGAAGTCGAGGGAAACTTTAACAGTCAAGAAGCAAG ]
[+] EMBL CB624225 [ CTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGTCCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAACTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGACGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGTCTATATTTATGTGCGACAAGCAGCGAGAGAACTT ]
[+] EMBL CB658803 [ CCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCATAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCT ]
[+] EMBL CB677317 [ AACTGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGG TGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAA TTTCAG GAACTCGGAGAGGCATACC AAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTC TTT GGGATGC TTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGAAAGGATG AAAAAGATGGAGGAAAGTGAC ]
[+] EMBL AU101062 [ TTGTATATGGGTGTCCCATTCCTTAGCTGATTGGNTCAGAGACC AAGGGCCACTGCATTAAATTCACAGNTTAATGCCGC TTCAGGNCC TATCGCTCTGATGCAGCTAC AAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAA ]
[-] EMBL CB624226 [ GTATATGGGTGTACCATT CATAGCTGAGTGGGTCAGAGA C AAGGGCCCCTGCATTTAA TCACAGGTTTATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTAC AAGGAGGGATG AAAAAGATGGAGGAAAGTGCCAAT AAGGGGGGCC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTCCGAGCAAGAGCATTGAAAAAGCTTGGGACAATATT CCAGGGTGGGAAGTCTCTGTCCCATCAAGAAACCTGCCTCCGGGTGGttccc ]
[+] EMBL AU095749 [ gnTCAGAGA C ANGGGCCACTGCCTTTAA TCACAGGTTAATNCCGCTTTCAGGC C TATCGCTCTGATGCAGCTAC AAGAAGGGTTGAAAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAGCCNGTTTTGAAAGACGCCNGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCCNGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTNACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaa ]
[+] EMBL AU108251 [ tTCAGAGA CAAAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGG GCNTATCGCTCTGATGCAGCTNCAAAGAAGGGATG AAAAAGATGGAGGAAAGTGACAAT AAGGAGGACC NGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGTTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA]
[-] EMBL CA759342 [ agaggacGA C AAGGGCCACTGCATTAAA TCACAGGTTAATGCCGC TTCAGGCGC TATCGCTCTGATGCAGCTCC AAGAAGGGATG AAAAAGATGGAGGAAAGTGCCAAT AAGGAGGACC AGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCA TGCTTAGGTACCTATGGAAAATTAAT GTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA GGGAAGAAAAAAAAAGTACACCTGACGGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCA TTTTTGTGAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGT AAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaaaa ]
[+] EMBL BM419217 [ AGTGACAATNAAGGAGGACCAAGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCACTGCTTAGTTACCTATGGAAAATTAATCGTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAG CAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATT CCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAAGGAAGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCACCTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCNGCATATTACTCNCCTTGGGCTATCTCGTTGTAAGATTaaa ]
[-] EMBL CF309931 [ CAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTAaaaaa ]
[+] EMBL CF309932 [ CAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTAaaaa ]
[+] EMBL AU094877 [ CAGCCNACGGCAGGGAGCAGCAACATCGAACTGAAGACTGCAAAAGTACAAAA AGGA AAAAAAAAAGTACACCTGACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGNCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAGATTTGCAA ]
[+] EMBL BI810052 [ GACAGACGCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCTTGTCCGTTTATTCA TTTTTGTAAGATTTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTTTGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACCCGAAGATTTTGTTGGTGCTCTGCAACCTGCATATTACT AGCTTGGGCTATCTCGTTGTAAaaaaaaaa ]
consensusID : consensus_15748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence
[GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCNCCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGTGGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA]
[+] EMBL OSS10693A [GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCNCCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGTGGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15748#0 TTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCT 60
consensus_15748#1 -------------GGTTCGATTTTTTTTNNNCCCCAATTTNNTCCNGGCGCTCACCNCCN 47
** ************ ********* *** ** ******* **
consensus_15748#0 CCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTGCGGGCGAGATCCAAGG 120
consensus_15748#1 CCNCCCCCGGGATCTNCCAGAAGCTNCCAGAACNGACCTTGGTGCGGGCGAGATCCAAGG 107
** ************ ********* ******* **************************
consensus_15748#0 AGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGT 180
consensus_15748#1 AGGAGGGTTTCCNGCCATGGTGAAGGATACCGCGTACNACGACACCCNGGGGGTCAGCGT 167
************ ************************ ********* ************
consensus_15748#0 GGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGGTGCATCC 240
consensus_15748#1 GGACGCCTCCCCNGNCGAGATCAAGAAGGCCTATNACCACAAGGCGAA------------ 215
************ * ******************* *** *********
consensus_15748#0 GGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAATTTCAGGAACTCGGAGAGGCATA 300
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 CCAAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCT 360
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TCCTCAGGATAACATGGTGGATCCTGCTGCTGTCTTTGGGATGCTTTTTGGAAGTGACTA 420
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGA 480
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 AAACTTAAACAGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAA 540
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 AGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGA 600
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 GAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGC 660
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGA 720
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 ACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATTCATAGCTGAGTGGGTCAGAGACAA 780
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 GGGCCACTGCATTAAATCACAGGTTAATGCCGCTTCAGGCGCTATCGCTCTGATGCAGCT 840
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 ACAAGAAGGGATGAAAAAGATGGAGGAAAGTGACAATAAGGAGGACCAGATTATGAAGAG 900
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TTTCGAGGAGAAAAAAGATGCCATGCTTAGTTACCTATGGAAAATTAATGTGGTTGATAT 960
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TGAGTCAACACTTACACATGTTTGCCAAGCAGTTTTGAAAGACGCCAGTGTCCCAAAAGA 1020
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCAGGGTGCGAA 1080
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 GTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGC 1140
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 AACATCGAACTGAAGACTGCAAAAGTACAAAAAGGAAAAAAAAAAGTACACCTGACAGAC 1200
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 GCAATTTCTGGTTTTTTGGAGGTGTCGTCTCTCGTGTCCGTTTATTCATTTTTGTAAGAT 1260
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TTTAGACGACGCGTATCGTTCTGGATAAAATTTGCTGTTTGATTTGGTCTCCGTTTTCTT 1320
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 TGTAAAAATGGTGATGCTGTCGTGAGCTCTGAACACGAAGATTTTGTTGGTGCTCTGCAA 1380
consensus_15748#1 ------------------------------------------------------------
consensus_15748#0 CCTGCATATTACTAGCTTGGGCTATCTCGTTGTAAGATTTGCAAAAAA 1428
consensus_15748#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||