These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1911 fasta sequence [GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGCCGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCAGCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCAAGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG-CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA-CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC-GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA-GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA-TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA-CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC-GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC-TAACTTCG-CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAATCTTGAATTGTTGCCTNCTTTATTTGAGTCAAAAA] [+] EMBL AK071273 [GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGCCGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCAGCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCAAGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGGGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAGTCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCT ] [+] EMBL C74519 [ AAGGCCGTGCCGCTCCAGTNGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGTCATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTGCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTNGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGANCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTC ] [+] EMBL CB650593 [ AGGCTTTCCTGATAGTGTCACTCCTTCATATGTCCCATACATGACATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATA GATCAAGATTTGGAGAGGCATTTCANGAACCTGCTTCTTTTGTTGCCATAAAGCCTTTG ] [+] EMBL OSR31031A [ GTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACA ] [+] EMBL OSR15131A [ GTGTATTCACGACAAGAACCTTGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACTGGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGAAATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAGCTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCGCAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACAAGGCATATGCAAAAGGAGAAA ] [+] EMBL CF297745 [ ACAAGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACTAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACAC ] [+] EMBL AK119214 [ TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACAGAGGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCT ] [+] EMBL CF196639 [ GAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGAGATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCATTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCNNNGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAANGCNNGGAA ] [+] EMBL CB681626 [ GAGACTATATTTAATCCACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAACCTGCTTCTTTTGTTGCCATAAGGCCCTTGTTTGAGGATGAGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCATATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGATATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAAGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGCATATCTATCTCACTATCTGTATTTAGGACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATT ] [-] EMBL CB650594 [ AGAGGTACATTGTTACATATAACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTG ] [+] EMBL AU031396 [ GCTCAAGGACCAAGCAAAGCCAGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGANCATGGACTTNATACCACACATTGCNGAATCTTGNCAAGATTGTCACTTCATCATATGGAGTTTTCAAGNNGAAAGCGAGGGAACAGGGATGGATAATGTCAGTATCATTGCTTAA CCCTGGACGAGCTCGGATGTGNGGAATAGTACCTCAATGn ] [-] EMBL CB681627 [ AGATGATATTCTCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACTTGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACATGGACTTTATACCACACATTGCTGAATCTTG CAAGATTGTCACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAAAAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAG GTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAAgg ] [-] EMBL CB639068 [ CACTTCATCATATGGAGTTTTCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCNTAACTTCG CGAATCTG ] [-] EMBL CF297746 [ AGGGATGGATAATGTCAGAATCATTGCTTAA CCCTGGACGAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAAAAAA ] [+] EMBL AU032001 [ cCATTGCTTAACCCCTGGACGAGCTCGGTTGTGTGGNATAGTCCCTCAATGCCCCNATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTNCCTGGCATGCACCGCGCGAGACA GGATGGATGGGTNCTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGNGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTGGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAACTCAGTTCTTGAATTGTTGCCTNCTTTATTTGAGTCAAAAA] [+] EMBL AU094811 [ CCCAATAATATTCGTTTGTTATAGTTGAATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTNCCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAANNAACATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACNTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTGTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCAAAAAAAAA ] [+] EMBL AK058398 [ GTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACGTCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCGGTTTTTCCATAAAGAAGAGCTCT ] [+] EMBL AU173164 [ TATGTGAGTCAGC GAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTTTCCAACTCAGTTCTTGAATTGTTGCCTACTTTATTTGAGTCAAAAA] [+] EMBL BE228618 [ AGTCAGCGGAACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACAGGGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAANGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATANTCCTCNGGTGTAT TTTTGAACGACCTAATTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCGCCGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAANAACTCT ] [+] EMBL OSR04681A [ AACTTCTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCATTGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATA CTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCCATAAAGAAGAGCTCTGTTTGTT ] [+] EMBL CB682873 [ CTGCCATGCACCGCGCGAGACA GGATGGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCA TGGGGTATGCTGACTCATGGAAAGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATAGCTGGACTAACAAGCTTCTTGTATATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGC TAACTTCG CGAATCTGTTGGTGTTTGTAAATGCCA ] [+] EMBL CF315669 [ TATCTATCTCACTATCTGTATTTAGTACTCTGTATAATGAGACGGGTATCCGCCATATAGTCGTC GGTGTATGTATTGACCGACCTAGTTTTTGTTTCGACTCT ] consensusID : consensus_15755#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence [ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAGGGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTTCTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTACTGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACCACGGAGACTATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGATCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTCCATAAGCCTTTGTTTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAATAATACCGTGTATTAATTAAAAAAAAAA] [+] EMBL BM418622 [ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAGGGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTTCTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTACTGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACCACGGAGACTATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGATCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTCCATAAGCCTTTGTTTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAATAATACCGTGTATTAATTAAAAAAAAAA] consensusID : consensus_15755#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 250 fasta sequence [AATACTGGANTAACAAGCTNCTTGTATATCTNTCTCACTACCTGTATTTAGTACTNTGTATAATGAGACGGGTATCCGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCTAACTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU031397 [AATACTGGANTAACAAGCTNCTTGTATATCTNTCTCACTACCTGTATTTAGTACTNTGTATAATGAGACGGGTATCCGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCGACTCTACTTTCATTGTTTCGGCTAACTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCCATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15755#0 GCTGTTTCGCCGCACCCATCGAAATCTCACCCGCTCTCTCTCTCTCGCGCGCGCTGCCGC 60 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CGAGGAAGTGGAGCTACGTGGTGGAGGGGGGCGCGTCCCCAGGGAAGGCCGGGAGGGTCA 120 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 GCGGGAGCGGGAGGGGGAGGGGGAGGGGTGGGGCCGCGTCGCCGATGGGTGTCACCTTCA 180 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 AGGCCGTGCCGCTCCAGTCGCCGCTGCCGCCCGTCGAGGAAATAATGTCCTTCATTAGGT 240 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CATATGTTGTACCTGAAGGCTTTCCGGATAGTGTCACTCCTTCATATGTCCCATACATGA 300 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CATGGAGAGCATTGAAGCATTTCTTTGGTGGAGCAATGGGTGTATTCACGACAAGAACCT 360 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TGCTAAACTCTGTTGGAGTTGCCCAAAGTAGGGCAACATCTGGAGCTGTGGCTATCAACT 420 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 GGATACTCAAGGATGGAGCTGGCCGAGTTGGAAAAATGCTTTTTGCCCGCCAAGGGAAGA 480 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 AATTTGACTACGACCTAAAGCAGCTTCGCTTTTCTGGCGATCTCTTGATGGAGTTAGGAG 540 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CTGGGATAGAGTTAGCTACGGCAGCTTTCCCTCAACTTTTCCTACCTATGGCTTGCATCG 600 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CAAATGTTGTTAAGAATGTTGCTGCTGTTACATCAACCTCGACCCGTACACCAATCTACA 660 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 AGGCATATGCAAAAGGAGAAAATATTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGA 720 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 ACATTGCTGATCTGTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCAT 780 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATGAGGTGA 840 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 GATCTGTTGTGCTGAACACTCTAAACACGGCAAGATTTACTGTGGCAGTTGATTCCTTCA 900 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACTCACAGGAGACTATATTTAATC 960 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CACCATGGCGGCATCAGCCAGTTGCAATAGGATCAAGATTTGGAGAGGCATTTCAGGAAC 1020 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 CTGCTTCTTTTGTTGCCATAAGGCCTTTGTTTGAGGATGAGAGGTACATTGTTACATATA 1080 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 ACCCAACAAAGGACAAGGTATATGCTTTGCTCAAGGACCAAGCAAAGCCAGATGATATTC 1140 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TCAAAGCCGCTTTCCATGCACATGTATTACTACATTTTATTAATGCATCACATGCTAACT 1200 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TGAATGCACGGAAGCGGATGAACTCCAATCGGTCATACCAAAATGCAAACCCACTGAACA 1260 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TGGACTTTATACCACACATTGCTGAATCTTGCAAGATTGTCACTTCATCATATGGAGTTT 1320 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 TCAAGAAGAAAGCGAGGGAACAGGGATGGATAATGTCAGAATCATTGCTTAACCCTGGAC 1380 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 GAGCTCGGTTGTGTGGAATAGTACCTCAATGACCCAATAATATTCGTTTGTTATAGTTGA 1440 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ------------------------------------------------------------ consensus_15755#0 ATGGATGGTACAATTTTTTTTCATACATCGAATTCGGGCCCTATGTGAGTCAGCGAACTT 1500 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 ----------------------ATCCAAAGGAGAAAATATTGGAGATGTCACTCCCCAAG 38 consensus_15755#0 CTTTAACTAAATCAACCATATCGAAGTGAAGTACCTGGCATGCACCGCGCGAGACAGGAT 1560 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 GGAGAAAGTGTTGGGAACCTTGCTGATCTGTTGGGAACTGGTTTGAGCCTTGTTGAATTT 98 consensus_15755#0 GGATGGGTACTTCAACTTTGGAGCGATGTGCAACATCATGGGGTATGCTGACTCATGGAA 1620 consensus_15755#2 ------------------------------------------------------------ consensus_15755#1 CTAAGAGGAATCCACTCCTTGGTGACTTCATTTCCTTCTTGTCTTGTGGCTATCTCCTTA 158 consensus_15755#0 AGACGGGGAAGGAAGGAGAAACTAACCAAAAAAAATACTGGACTAACAAGCTTCTTGTA- 1679 consensus_15755#2 ---------------------------------AATACTGGANTAACAAGCTNCTTGTA- 26 consensus_15755#1 GTTCATACCACTGAGGTGAGATCTGTTGTGCTGAACNCTCTAAACACCGGCNAGATTTAC 218 ** ** * ** ** * ** consensus_15755#0 TATCTATCTCACTATCTGTATTTAGTACTCTGTATAAT----------GAGACGGGTATC 1729 consensus_15755#2 TATCTNTCTCACTACCTGTATTTAGTACTNTGTATAAT----------GAGACGGGTATC 76 consensus_15755#1 TGTGGCCGTTGATTCCTTCACTTAAGAGCGGACATGTTCCCTCATTGAAGGAAGGAAACT 278 * * * * ** * *** * ** * ** ** * consensus_15755#0 CGCCATATAGTCGTCGGTGTATGTATTGACCGACCTAGTTTTTGTTTCG--ACTCTACTT 1787 consensus_15755#2 CGCCATATAGTCGTCGGTGTATGTATTGNCCGACCTAGTTTTTGTTTCG--ACTCTACTT 134 consensus_15755#1 CACCACGGAGAC-----TATATTTAATCCCCCATGGCGGCATCAGCCCGTTGCCATAGGA 333 * *** ** * * *** ** * ** * * * ** * ** consensus_15755#0 TCATTGTTTCGGCTAA----CTTCGCGAATCTGTTGGTGTTTGTAAATGCCAGTTTTTCC 1843 consensus_15755#2 TCATTGTTTCGGCTAA----CTTCGCGAATCTGTTGGTGTTTGTAAATGCCNGTTTTTCC 190 consensus_15755#1 TCCCAGATTTGGAGAGGCACTTTCAGGAACCTGGCTTCTTTTGTTC-CATAAGCCTTTGT 392 ** * ** ** * *** *** *** ***** * *** consensus_15755#0 ATAAAGAAGAGCTCTGTTTGTTTCCAAAAAAAATCTTGAATTGTTGCCTNCTTTATTTGA 1903 consensus_15755#2 ATAAAGAAGAGCNNTGTTTGTTTNCAAAAAAAAAAAAAAAA--------AAAAAAAAAAA 242 consensus_15755#1 TTGAGGATGAGAGGTACCTTGTTACATATAACCCATAAGAACCCAGGCTGATTACCAAAT 452 * * ** *** * * ** ** * ** * consensus_15755#0 GTCAAAAA------------------- 1911 consensus_15755#2 AAAAAAAA------------------- 250 consensus_15755#1 AATACCGTGTATTAATTAAAAAAAAAA 479 * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||