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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15805#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1756 fasta sequence
[GGTTTCCCTTCCAGCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGAAGAATTTGACTGTTGAGGAAACTAAGAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGAGTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCGCCCCAGAGGATCATATACGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTTTGCTTTAAGCATTGTATTTTAGTGGAAAACTACTGCAATTTTATATTTTACCTGAGGCCATTCAAATTTTGGTCTTCAATTAAGTCAAGCGTCCTGTAGCCTTATGGTTCTGCTTTTCATGGGCCTGTCATTTATTTTACCATTTTTTCCAGGTGAA--CAAATATGCGTTCTCAGGTGG-CCGGGACTCAATTGAGCT-CCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAAAAGCT]
[+] EMBL CB645825 [GGTTTCCCTTCCAGCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGAAGAATTTGACTGTTGAGGAAACTAAGAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGAGTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCGCCCCAGAGGATCATATACGAAAAGTCAGCTT ]
[+] EMBL AK072304 [ GAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTTTGCTTTAAGCATTGTATTTTAGTGGAAAACTACTGCAATTTTATATTTTACCTGAGGCCATTCAAATTTTGGTCTTCAATTAAGTCAAGCGTCCTGTAGCCTTATGGTTCTGCTTTTCATGGGCCTGTCATTTATTTTACCATTTTTTCCAGGTGAA CAAATATGCGTTCTCAGGTGG CCGGGACTCAATTGAGCT CCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAACAGCT]
[+] EMBL C97399 [ aAGNTGAAACCAAATATGCGTTCTCAGGTGGCCCGGGACTCAATTGAGCTCCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAG AGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAAAAaaa]
[+] EMBL AU092765 [ ATGCGTTCTCAGGTGG CCGGGACTCAATTGAGCT CCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAAAA ]
[+] EMBL AU092773 [ TGCGTTCTCAGGTGG CCGGGACTCAATTGAGCT CCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCNTCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAAAA ]
consensusID : consensus_15805#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1632 fasta sequence
[CCACACGTCAGCCAGAGCACGAGGTTTATCTCCCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT-GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATC-CGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGT-AATATTT-GGTGGCACG-CTT-GATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAACAGCTTTGTCGTCT]
[+] EMBL AK102417 [CCACACGTCAGCCAGAGCACGAGGTTTATCTCCCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCATCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATCCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATC CGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGT AATATTT GGTGGCACG CTT GATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAACAGCT ]
[+] EMBL AK060440 [ AGAGCACGAGGTTTATCTCCCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGTCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATC CGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGT AATATTT GGTGGCACG CTT GATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACAAACAGCT ]
[+] EMBL CB643435 [ TATCTCCCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGACCTCACAACATGGCAGCGGCATCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGG ]
[+] EMBL CB671200 [ ATCTCCCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACA ]
[+] EMBL CB678336 [ CCACCCTCTCCAATCCCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAGCGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACCAACTAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACTAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACTCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAACGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTT ]
[+] EMBL AU161191 [ acngnnAGGCGTGAGATCCCGCCATGGCAGCGGCA CGAAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTC ]
[+] EMBL OST171 [ TCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGAT CTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTG CCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTG ]
[+] EMBL D42636 [ TCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGCAGGAT CTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTG CCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTG ]
[+] EMBL CA998865 [ TCTTAT GGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACCAAGGTGGACca ]
[-] EMBL CB677879 [ GACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATC CGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGT AATATTT GGTGGCACG CTT GATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAAAAAGCAAGAAACAAACAGCTT ]
[-] EMBL CB678337 [ ATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTGTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGCCAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCTCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCAGTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGGTAGTAGGTGTATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTAGTGTGTTTCACGATTTATATTTGTAGCCTGCCCAGTGTT AATATCT GGTGGCTCGTCTT ATTCTTCATATCTGTTGGGGATAAATTTATTTATGTCAAAGCCTGCTCCATCAATATAGAGATATCGTGCTTTTGTTTGGAATCAGAAATGTTACGACAGTTTTGACGTTGAT ]
[-] EMBL CB645826 [ CATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTCCAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTTTATC CGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTTTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGT AATATTT GGTGGCACG CTT GATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAACCAAAAGGGTTTGTCGTCT]
[+] EMBL BQ907814 [ ACTCGTGAATATTTGGGTGGCACG CTTGGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTGGTATGGAATCAGAAANGTNACAACAGTTTTGAGCTTAATCAGAAC ATCAAGAAAC AACAGCTTTGTCGTCn]
consensusID : consensus_15805#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 835 fasta sequence
[AGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTNTTCCTTGAAGATGACAATNAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTNTGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGG-AGATATTTGCTAC-TAGCTGGATAAGATGTCCGAAG-TGATCTCTA-GAATTTT-GG-AAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGGGGATAAATTTATTTATCTTAAAGCCAAAAAAAAAAAAAA]
[-] EMBL CB643436 [AGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGG AGATATTTGCTAC TAGCTGGATAAGATGTCCGAAG TGATCTCTA GAA TTT GG AAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGGGGATAAATTTATTTATCTTAAAGCCAAAAAAAAAAAAAA]
[+] EMBL AU063188 [ TATGCGTTCTCAGGTGGCCGGGACTCAATTAAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTNTTCCTTGAAGATGACAATNAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGANGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTNTGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGG AGATATTTNCTAC TAGCTGGATAAGATGTCCGAAG TGATCTCTAGGAATTTT GGAAAGCAGCATTC ]
[+] EMBL AU063191 [ TATGCGTTCTCAGGTGGCCGGGACTCAATTNAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTNTTCCTTGAAGATGACAATNAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTNTGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTNATGTC AAAACTGCCTGGNGGATATTTGCTACTTAGCTGGNTAAGATTTCCGAAGNTGATCTCTA GGATTTTGGG AAGNAGCAT ]
consensusID : consensus_15805#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 782 fasta sequence
[AATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATTTGTGATTGTGATGTTCAGGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACA]
[-] EMBL CB671201 [AATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATTTGTGATTGTGATGTTCAGGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACA]
consensusID : consensus_15805#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 674 fasta sequence
[CAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTCAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTCTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAACCAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA762207 [CAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTCAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTCTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAACCAAAAAAAAAAAAAA ]
[+] EMBL CB000302 [ aCTGCAATATATGTGACAGATAGTGCTAAAGAAATCAAGACAAAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAGACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTCATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAATCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTTTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACNAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15805#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 402 fasta sequence
[GAAGGAGTACAAGGAAGGAAGGATGCTTACGGGTGAAGTNAAGNAGCGNCNTNTTGCAATTCTATCCCAACTTGTTTCGAGNCANCAAAGAGCTTGAGCACTTGTGACCNCGGAGATATGTCGNTGTATTTATAGCGGCGAGACCNCTTTCCCAAATATGTTTGGCTGAGTCTGATGNCAAAAACTCCCGGGAGATATTTGCTACTAGCTGGATAAGATNCCCGAAGTGCTCTCTAGANTTTGGNAGCAGCATTCGTGGTNTTTCACGNCTTATATTTNGGAGGGCCACTCGTAATAATNTGTGGNAGGCACGCTTGATTTTGCAAATCAGTTGAGGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGACCAACGTCTTTTTTNGTTTGGTTT]
[+] EMBL D42945 [GAAGGAGTACAAGGAAGGAAGGATGCTTACGGGTGAAGTNAAGNAGCGNCNTNTTGCAATTCTATCCCAACTTGTTTCGAGNCANCAAAGAGCTTGAGCACTTGTGACCNCGGAGATATGTCGNTGTATTTATAGCGGCGAGACCNCTTTCCCAAATATGTTTGGCTGAGTCTGATGNCAAAAACTCCCGGGAGATATTTGCTACTAGCTGGATAAGATNCCCGAAGTGCTCTCTAGANTTTGGNAGCAGCATTCGTGGTNTTTCACGNCTTATATTTNGGAGGGCCACTCGTAATAATNTGTGGNAGGCACGCTTGATTTTGCAAATCAGTTGAGGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGACCAACGTCTTTTTTNGTTTGGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 ----------------------GGTTTCCCTTCCAGCCTCTCCAATCCCCTCCTCCTCGC 38
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CCACACGTCAGCCAGAGCACGAGGTTTATCTCCCACCCTCTCCAATCCCCTCCTCCTCGC 60
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAG 98
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CGCCGCCGCCGCCGCCGCAGCGTCCCCGGCGACCGGAGGCGTGAGATCCCGCCATGGCAG 120
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGC 158
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CGGCAGCGGAGGCCGTGACCGAGGTGGATGCCACGAACGAGGAGGGGGAGGAGGAGGAGC 180
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 AGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCG 218
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 AGGTGGTGAACCCGTGGGAGGTGTCGGCGGGGAAAGGCGGGATCGACTACGACAAGCTCG 240
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 TCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCA 278
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 TCGACCAGTTCGGCTGCCAGCGCCTCGACGACGCGCTCGTCGCCCGCGTCGCCCGCCTCA 300
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGA 338
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CCGCCCGCCCCCCTCACCGCTTCCTCCGCCGCGGCCTCTTCTTCGCCCACCGGGATTTGA 360
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 ACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGC 398
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 ACGAGATACTGGATTTGTACGAGAAGGGGGAGAAGTTCTACCTCTACACGGGGAGGGGGC 420
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGC 458
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CCTCGTCGGAGGCGCTGCACCTCGGCCATCTCATCCCCTTCATGTTCACCAAATATCTGC 480
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 AGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGA 518
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 AGGATGCTTTCAAGGTGCCCCTAGTAATACAGCTAACTGATGATGAGAAGTTCTTATGGA 540
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 AGAATTTGACTGTTGAGGAAACTAAGAGGCTTGCCCGTGAAAATGCAAAAGATATCATTG 578
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 AGAATTTGACTGTTGAGGAAACTAAAAGGCTTGCCCGTGAAAATGCAAAAGATATCATTG 600
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGAGTTTAATTATGTTGGAGGTG 638
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 CTTGTGGATTTGATGTCGAAAGGACTTTCATTTTCTCTGATTTTAATTATGTTGGAGGTG 660
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 CTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAA 698
consensus_15805#2 ------------------------------------------------AGGTTGTTGGAA 12
consensus_15805#1 CTTTTTATGAAAACATGGTTAAAGTTGCCAGATGTGTGACATATAATAAGGTTGTTGGAA 720
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 TATTTGGATTCGCCCCAGAGGATCATATACGAAAAGTCAGCTTTCCTCCTGTGCAAGCGG 758
consensus_15805#2 TATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGG 72
consensus_15805#1 TATTTGGATTCACCCCAGAGGATCATATAGGAAAAGTCAGCTTTCCTCCTGTGCAAGCGG 780
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 TTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCT 818
consensus_15805#2 TTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCT 132
consensus_15805#1 TTCCATCATTCCCTTCTTCATTTCCACATCTCTTCTCTGGGAATGACCAACTACGGTGCT 840
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 TAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAA 878
consensus_15805#2 TAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAA 192
consensus_15805#1 TAATCCCATGTGCAATAGACCAGGATCCTTATTTCAGGATGACCCGGGACGTTGCTCCAA 900
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------------------
consensus_15805#0 GAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGG 938
consensus_15805#2 GAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGG 252
consensus_15805#1 GAATTGGTTACCAGAAACCATCATTAATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGG 960
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ------------------------------------------------AATAGACCAGGA 12
consensus_15805#0 AGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTA 998
consensus_15805#2 AGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTA 312
consensus_15805#1 AGAACACAAAAATGTCGGCCAGTGATCCAAATTCTGCAATATATGTGACAGATAGTGCTA 1020
consensus_15805#4 ------------------------------------------------------------
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 TCCTTATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATT 72
consensus_15805#0 AAGAAATAAAGACAAAGGTTTGCTTTAAGCATTGTATTTTAGTGGAAAACTACTGCAATT 1058
consensus_15805#2 AAGAAATAAAGACAAAGGT----------------------------------------- 331
consensus_15805#1 AAGAAATAAAGACAAAGGT----------------------------------------- 1039
consensus_15805#4 -----------------------------------------CAAAAATGTCGGCCAGTGA 19
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 AATTGAATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGA 132
consensus_15805#0 TTATATTTTACCTGAGGCCATTCAAATTTTGGTCTTCAATTAAGTCAAGCGTCCTGTAGC 1118
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 ------------------------------------------------------------
consensus_15805#4 TCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAA 79
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 TCCAAATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTGAACAA 192
consensus_15805#0 CTTATGGTTCTGCTTTTCATGGGCCTGTCATTTATTTTACCATTTTTTCCAGGTGAACAA 1178
consensus_15805#2 ------------------------------------------------------GAACAA 337
consensus_15805#1 ------------------------------------------------------GAACAA 1045
consensus_15805#4 ATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCT 139
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 ATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCT 252
consensus_15805#0 ATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCT 1238
consensus_15805#2 ATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCT 397
consensus_15805#1 ATATGCGTTCTCAGGTGGCCGGGACTCAATTGAGCTCCATAGAAAACTTGGAGCTAACCT 1105
consensus_15805#4 TGAT-------------------GTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTG 180
consensus_15805#5 ------------------------------------------------------------
consensus_15805#3 TGATTTGTGATTGTGATGTTCAGGTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTG 312
consensus_15805#0 TGAT-------------------GTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTG 1279
consensus_15805#2 TGAT-------------------GTGGATGTTCCAATCAAGTACCTGAACTTNTTCCTTG 438
consensus_15805#1 TGAT-------------------GTGGATGTTCCAATCAAGTACCTGAACTTCTTCCTTG 1146
consensus_15805#4 AAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGG 240
consensus_15805#5 ----------------------------GAAGGAGTACAAGGAAGGAAGGATGCTTACGG 32
consensus_15805#3 AAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGG 372
consensus_15805#0 AAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGG 1339
consensus_15805#2 AAGATGACAATNAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGG 498
consensus_15805#1 AAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAGGATGCTGACGG 1206
*************************** ****
consensus_15805#4 GTGAAGTCAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAG 300
consensus_15805#5 GTGAAGTNAAGNAGCGNCNTNTTGCAATTCTATCCCAACTTGTTTCGAGNCANCAAAGAG 92
consensus_15805#3 GTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAG 432
consensus_15805#0 GTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAG 1399
consensus_15805#2 GTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAG 558
consensus_15805#1 GTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAGACATCAAAGAG 1266
******* *** **** * * ***** ******** **** *** **** ** *******
consensus_15805#4 CTAGAGCACTAGTGACCGAGGAGATG-GTCGATGTATTTATGGCGGCGAGACCTCTTCCC 359
consensus_15805#5 CTTGAGCACTTGTGACCNCGGAGATATGTCGNTGTATTTATAGCGGCGAGACCNCTTTCC 152
consensus_15805#3 CTAGAGCACTAGTGACCGAGGAGATG-GTCGATGTATTTATGGCGGCGAGACCTCTTCCC 491
consensus_15805#0 CTAGAGCACTAGTGACCGAGGAGATG-GTCGATGTATTTATGGCGGCGAGACCTCTTCCC 1458
consensus_15805#2 CTAGAGCACTAGTGACCGAGGAGATG-GTCGATGTATTTNTGGCGGCGAGACCTCTTCCC 617
consensus_15805#1 CTAGAGCACTAGTGACCGAGGAGATG-GTCGATGTATTTATGGCGGCGAGACCTCTTCCC 1325
** ******* ****** ****** **** ******* * *********** *** **
consensus_15805#4 --AATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGG 417
consensus_15805#5 CAAATATGTTTGGCTGAGTCTGATGNCAAAAACTCCCGGGAGATATTTGCTACTAGCTGG 212
consensus_15805#3 --AATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGG 549
consensus_15805#0 --AATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGG 1516
consensus_15805#2 --AATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGG 675
consensus_15805#1 --AATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTACTAGCTGG 1383
*********************** ******** ** **********************
consensus_15805#4 ATAAGATGTCCGAAGTGATCTCTAGAATTT-GGAAGCAGCATTCGTG-TGTCTCATGACT 475
consensus_15805#5 ATAAGATNCCCGAAGTGCTCTCTAGANTTT-GGNAGCAGCATTCGTGGTNTTTCACGNCT 271
consensus_15805#3 ATAAGATGTCCGAAGTGATCTCTAGAATTT-GGAAGCAGCATTCGTG-TGTTTCATGACT 607
consensus_15805#0 ATAAGATGTCCGAAGTGATCTCTAGAATTT-GGAAGCAGCATTCGTG-TGTTTCATGACT 1574
consensus_15805#2 ATAAGATGTCCGAAGTGATCTCTAGAATTTTGGAAGCAGCATTCGTG-TGTTTCATGACT 734
consensus_15805#1 ATAAGATGTCCGAAGTGATCTCTAGAATTT-GGAAGCAGCATTCGTG-TGTTTCATGACT 1441
******* ******** ******** *** ** ************* * * *** * **
consensus_15805#4 TATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCA----CGCTTGATTTTGCAAATC 531
consensus_15805#5 TATATTTNGGAG--GGCCACTCGTAATAATNTGTGGNAGGCACGCTTGATTTTGCAAATC 329
consensus_15805#3 TATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCA----CGCTTGATTTTGCAAATC 663
consensus_15805#0 TATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCA----CGCTTGATTTTGCAAATC 1630
consensus_15805#2 TATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCA----CGCTTGATTTTGCAAATC 790
consensus_15805#1 TATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCA----CGCTTGATTTTGCAAATC 1497
******* * ************** * **** * ******************
consensus_15805#4 AGTTGAGG-ATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTT 590
consensus_15805#5 AGTTGAGGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGA-CCAACGTCTT 388
consensus_15805#3 AGTTGAGG-ATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTT 722
consensus_15805#0 AGTTGAGG-ATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTT 1689
consensus_15805#2 AGTTGGGG-ATAAATTTATTTATCTTAAAGCCAA----AAAAAAAAAAAA---------- 835
consensus_15805#1 AGTTGAGG-ATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCTT 1556
***** ** *********************** * ** * * *
consensus_15805#4 TTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAACCA 650
consensus_15805#5 TTTTNGTTTGGTTT---------------------------------------------- 402
consensus_15805#3 TTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACA 782
consensus_15805#0 TTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACA 1749
consensus_15805#2 ------------------------------------------------------------
consensus_15805#1 TTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAACA 1616
consensus_15805#4 AAAAAAAAAAAAAAAAAAAAAAAA 674
consensus_15805#5 ------------------------
consensus_15805#3 ------------------------
consensus_15805#0 AAAAGCT----------------- 1756
consensus_15805#2 ------------------------
consensus_15805#1 AACAGCTTTGTCGTCT-------- 1632
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||