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Oryza sativa
cluster # 15823 cluster # 15823       Sequences # 25       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15823#0 length = 981 sequences # 2  
consensus_15823#1 length = 949 sequences # 23  

consensusID : consensus_15823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 981
fasta sequence
                              [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAACCCCCCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAATATCGACGTGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCGGGGGAAGGGTCAGATGACCATGCAGTTTCTGCTGGCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGTGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACNCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACNGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAATTTCAGTAGTCAAAAAA]

[+] EMBL CA753933             [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAACCCCCCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAATATCGACGTGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCGGGGGAAGGGTCAGATGACCATGCAGTTTCTGCTGGCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGTGTGGTGCTGCGGCAGGTGGG                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU070976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACNCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACNGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAATTTCAGTAGTCAAAAAA]


>consensus_15823#0 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GCAAACCCCCCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATC TCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAA GCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGT CGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGT CCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAATATCGA CGTGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGT CATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGA GCGCAGCCGGGGGAAGGGTCAGATGACCATGCAGTTTCTGCTGGCGTCCAAGTACAGCAA GGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGTGTGGTGCTGCGGCAGGTGGGGGAGAG GAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGC GGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCT GGCGCGGTACAACCCGCCGTTTACNCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCC CGTCGAGTGATACNGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTA CTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCT TTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGA AAAATTTCAGTAGTCAAAAAA



consensusID : consensus_15823#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 949
fasta sequence
                              [ATCCAAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT-CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG-AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG-AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK102887             [ATCCAAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGAC                                        ]
[+] EMBL CF292498             [ATCCAAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCGGGGG AGGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF337271             [    AAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF336320             [    AAGTATCCAGCAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCGGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF293843             [    AAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK063822             [     AGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGAC                                        ]
[+] EMBL CF294524             [        ATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF335834             [                       AACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGTCATCACCT CCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OS1420A              [                       AACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTANCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C28042               [                          CCACCCCCGCCGCTNAGATCGATTCCAACCTTAATTTTAACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCNATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCNTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCAACGGNGGGTTCACCGTCCTCGGCAACTACATCGGCGNCCTCGGCAACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU064040             [                          CCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCAT ACCTTCGGCGAGCCCGAGAGTATCGCCATGACGG CCCGGTCATC CCT TCGGTGAGCCTGACCCGGTGGCGATGACCGCGCCGGTGATCACGGNCGAAGAGCGCAACCAGGGGAAAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAAGAAGCGCCGCGGCCGACGGACGAANCGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BI796099             [                                                                                                                                                                                                                                                                                                                                                                                                 CCTCCCGGTGAG CTGATCCGGTGGCGATGACCGCGCCGGTGATCAC GCCGAAGAGCGCGGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAA                         ]
[+] EMBL C99291               [                                                                                                                                                                                                                                                                                                                                                                                                                          CGATGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCCAGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCC NTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAAAAAAAAAA                 ]
[+] EMBL OSC561               [                                                                                                                                                                                                                                                                                                                                                                                                                         nantnGACCGCGCCGGTGATCACGGCCGAAGAGCGCAGCANGGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACNAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTNCATTGTTGGTGTCTAGTGATGTACTTATGCGCATGTACTTTTAT                                                                                                                                              ]
[-] EMBL CF335835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGGG AAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACG AGCGGGTGGTTCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTTTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAAAAAAA                    ]
[+] EMBL AU092815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAGGCGCCGCGGCCGACNGACG AGCGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCNTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCG TGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGAAAAAA                         ]
[-] EMBL CF294525             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGGGTGGTGCTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAAAAAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGAAATATAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATTTTGGAAAA                           ]
[-] EMBL CF336321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGGGAAAGGAAGTACGGGGTGGTGAGGTTCAACGGCCTGACCGGAAACAAGGTGGTGAAGGAAAAGGCGGAGTGGCTCAAGGCCGCGCTGGAAAAGGACGGGTTTACCGTCAAGGGCCCCTTTGTGCTGGGGCGGTACAACCCGCCGTTTACTTTGCCTCCGCTGGGCACCAAAGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTTTAGTGATGTACTGATGGGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTTTTTATTTTTTTATCCTTTTGACTTTGTTTTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATTTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA  ]
[-] EMBL CF293844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTAATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTA                                                                ]
[-] EMBL CF292499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATAAAGCGAGACTCCATTGTTAAAATATAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTAATCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAAAAAACATATC TGGGAAAAAAAA                      ]
[+] EMBL AU094166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGAGACAAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGANAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAAAAAAAAAAAAAAAAA          ]
[-] EMBL CF295977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTGTTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGAAAAAA                        ]
[+] EMBL AU162800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGNTCAACGAATAATGGACATATCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_15823#1 ATCCAAGTATCCAACAAAGAACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAA TTTTCACCTGCTCGCTGATCTCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAG ATCACGGTGGAGACGCCCAAGCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGC AAGTACCCGCCGTGCGTCGTCGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGAC CGCGACGGCGGGTTCACCGTCCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAAC ACCAAGCCAGAGAAGATCGACATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGT ATCGCCATGACGGCCCCGGTCATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCG CCGGTGATCACGGCCGAAGAGCGCAGCCAGGGGAAGGGTCAGATGACAATGCAGTTTCTG CTGCCGTCCAAGTACAGCAAGGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGGGTGGTG CTGCGGCAGGTGGGGGAGAGGAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGAC AAGGTGGTGAAGGAGAAGGCGGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACC GTCAAGGGCCCCTTCGTGCTGGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGC ACCAACGAGGTCATGGTCCCCGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGT GATGTACTGATGCGCATGTACTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTA TTTCTCTATTTCTTTATCCTTTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGA ATAATGGACATATCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15823#0      GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 60
consensus_15823#1      ----------------------------------------ATCCAAGTATCCAACAAAGA 20
                                                                    **      * * ***

consensus_15823#0      GCAAACCCCCCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATC 120
consensus_15823#1      ACAAACCCACCCCCGCCGCTGAGATCGAATCCGACCTTAATTTTCACCTGCTCGCTGATC 80
                        ******* ***************************************************

consensus_15823#0      TCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAA 180
consensus_15823#1      TCGCCGGCCGTCGACCGCCATGGGGATGGTGCTGGGCAAGATCACGGTGGAGACGCCCAA 140
                       ************************************************************

consensus_15823#0      GCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGT 240
consensus_15823#1      GCACGAGGTGCTCCACACCGGCGCCGGCTACGAGGTCCGCAAGTACCCGCCGTGCGTCGT 200
                       ************************************************************

consensus_15823#0      CGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGT 300
consensus_15823#1      CGCCGAGGTCACCTACGACCCCGCGGAGATGAAAGGCGACCGCGACGGCGGGTTCACCGT 260
                       ************************************************************

consensus_15823#0      CCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAATATCGA 360
consensus_15823#1      CCTCGGCAACTACATCGGCGCCCTCGGCAACCCGCAGAACACCAAGCCAGAGAAGATCGA 320
                       ****************************************************** *****

consensus_15823#0      CGTGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGT 420
consensus_15823#1      CATGACCGCGCCGGTCATCACCTCCGGCGAGCCCGAGAGTATCGCCATGACGGCCCCGGT 380
                       * **********************************************************

consensus_15823#0      CATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGA 480
consensus_15823#1      CATCACCTCCGGTGAGCCTGAGCCGGTGGCGATGACCGCGCCGGTGATCACGGCCGAAGA 440
                       ************************************************************

consensus_15823#0      GCGCAGCCGGGGGAAGGGTCAGATGACCATGCAGTTTCTGCTGGCGTCCAAGTACAGCAA 540
consensus_15823#1      GCGCAGCCAGGGGAAGGGTCAGATGACAATGCAGTTTCTGCTGCCGTCCAAGTACAGCAA 500
                       ******** ****************** *************** ****************

consensus_15823#0      GGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGTGTGGTGCTGCGGCAGGTGGGGGAGAG 600
consensus_15823#1      GGTGGAGGAGGCGCCGCGGCCGACGGACGAGCGGGTGGTGCTGCGGCAGGTGGGGGAGAG 560
                       ********************************* **************************

consensus_15823#0      GAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGC 660
consensus_15823#1      GAAGTACGGGGTGGTGAGGTTCAGCGGCCTGACCGGAGACAAGGTGGTGAAGGAGAAGGC 620
                       ************************************************************

consensus_15823#0      GGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCT 720
consensus_15823#1      GGAGTGGCTCAAGGCCGCGCTGGAGAAGGACGGGTTCACCGTCAAGGGCCCCTTCGTGCT 680
                       ************************************************************

consensus_15823#0      GGCGCGGTACAACCCGCCGTTTACNCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCC 780
consensus_15823#1      GGCGCGGTACAACCCGCCGTTTACTCTGCCTCCGCTGCGCACCAACGAGGTCATGGTCCC 740
                       ************************ ***********************************

consensus_15823#0      CGTCGAGTGATACNGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTA 840
consensus_15823#1      CGTCGAGTGATACGGCGAGACTCCATTGTTGGTGTCTAGTGATGTACTGATGCGCATGTA 800
                       ************* **********************************************

consensus_15823#0      CTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCT 900
consensus_15823#1      CTTTTATCAGGGTGTCCTTGTTACTCCTAGGCCCTAGCTATTTCTCTATTTCTTTATCCT 860
                       ************************************************************

consensus_15823#0      TTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGA 960
consensus_15823#1      TTTGACTTTGTTCTGTACTGATGTATGTTTGGATCAACGAATAATGGACATATCTTGGGA 920
                       ************************************************************

consensus_15823#0      AAAATTTCAGTAGTCAAAAAA-------- 981
consensus_15823#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 949
                       ****    *  *   ******        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)