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Oryza sativa
cluster # 1591 cluster # 1591       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1591#0 length = 2366 sequences # 2  

consensusID : consensus_1591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2366
fasta sequence
                              [GCGAAATGGATTTTTCAACCGGGTTTAGATCAATTACCTTTCACCTTCTCGTCTAGACCAGCCAAAGCCATAGCCGAAACTCACGGTCACGGTGCGTCCATGGATTTCGGACCTTGCAACGATACGCTCGACACCGAACTGCTACACGTGCTGACCTCCGGCGACGAGGTCCGCATGGCGGACCTGCTGGGCAGAGAACGCCGTGGCCATGGCCACTCCCTGTCCCAGGTGGCGATACGCGTCGACGACGACGACGACGGCCGCGCGCCGGCGGGAGCGAGCCGCCTCCTTGGCGTGACGACGGGCAACGGCAACACGGCGCTGCACGTGGCCGCCACCCGCGGGCACGCCGCGCTCGCGGCGCGTGGTCTGCGCGACGGCGCCCGCGCTGGCCGCCACGCGCAACAGGTTCCTCGACACGCCTCTGCACTGCGCGGCCAAGTCCGGGCACCGCGACGTGGCGGCCTGCCTCCTGTCAGAGATGCTGCGAGCCGGCGGCGCGGCGTCAGCGGCGCTGCCGCTGCGGCGGGCGACGAACTGCCTGGGCGCCACCGCCTTGCACGAGGCCGTGCGGAACGGCCACGCCGGGGTGGTGGCTCTCCTCATGGCGGAGGCTCCCGAGCTGGCCTCCGTGGCCAACGACGGTGGCGTCTCGCCGCTGTACCTGGCGGCGACGGTTGGCTCCGTGGACATTGTCCGGGCGCTGCTCCACCCGTTGCCTGATGGAACGCCCTCGCCGGCCTCGGCCGCTGGTCCGGACGGACGGACAGCTTTGCATTCTGCGGCAACTACTGGCAAAGAAATCGCGCGAGAAATACTGGACTGGAAGCCAGAGGGTCGAACACTGCTAACCAAAGCTGATTCGTCGGGCAGAACACCTCTCCACTTTGCTATATCATCACAAATTGAGCGGTTTGACGTGTTTCAGCTGTTCCTAGATGCAGAGCCCTCCCTAGCTCTGGTTTGTGATATCCAAGGATCATTTCCTTTGCATGTTGCTGCTGTGATGGGCAGTGTTAGGATCGTCGTTGAGCTCATACAGAAATGCCCCAACAACTACAACGATTTGGTCGATGATCGAGGAAGAAATTTTCTGCATTGTGCTGTTGAACATAACAAGGAAAGCATAGTTCGCTACATTTGCCGAGATGACAGGTTTGGTATCCTGATGAATGCAATGGACAATGAAGGAAATACTCCCCTCCATTTGGCCGCCGAGTATGGGCACCCAAGGATGGTCAGTTTACTCTTGGAGACGATGAGCGTCGATGTAGCCATTACCAACAGGGATGGTCTAACTGCTGCTGACCTTGCTTATCGCCATCTGCAACCTGGTTTGCACTATTTTCTGGTAATGGAACACGGTTCAGTTCATTAGTTCATCACAATTGGTTATCACGCAGCTGCAGAGAATCGTTTCATGTGCTGTCCTGTTTACTTGGCCAATTAATCTGTCTTCTTTCTTGTGATAATTTTTGTGTACAGAATCCTCGAGCCGTGGTAAAGAATCTCTTCTACTGCACCAGAGCACCGGTTACCCTAGAAGGGGATCATGCTAGGACTGGCATCCCATCGGCCATGGAGGATGCCGATGCTCCCAAGGACAGTGGTGGCGTGACATCCACCGGAACAGTCGCGTCCGTGCTGATCGCCACGGTGACGTTCGCGGCGGCTCTCACCGTTCCGGGGGGCTACGTCGCCGACGACCACCCGAACGCCGGGACGGCGGCGTCGGCCGGGCGGTTCGCCTTCAGGGCGTTCGCGGTGTCGGACACCATGGCGTTCCTCTGCTCCATCGTGGGCACCTGCCTCCTCGTCGTCGGCGAGGCGAGGGAGGTCCGGCCGAGCAGGGGCCGTCTCCGCGCCTACCAGGGGTCGGCGTGGGCGCTCGTGACGGCCGGGGCGCAGTTCATGGTCGCCGCGTTCGCGTTCGGGCTCCAGGTCGCGCTCGGCGGCGGCGCGGACAGCCGGTGGCTGGTGGTGTTCGTCCACGCGCTGTGCTCGGCATCGGTGCTGCTCTGCTTCCCGGGCATCTGGGCGCCGTTCTGCCTCGGGAAGGTGATCTGGAGGCGCGCCGGATGGCGAGGGCTCACGAATCTTCACCGGTGTCCGTCCAGTTTGGAAGAGTTCTTGTGGTGTTTCGTGACAAGCTTCTTGGCCAAAACTCTCTTGCGGACATTCCTCCCGGTGCTTATCGCGGTCACCTTGGTCGTCGCCATCGTGCTAAATATTGCAAAGCCCAACTGCTGAGTCGGCAAGAATTTGAGGATCGGAAGTCGTTAGTACTAGTTGGAGTATATTATTATAGCGTATGTGTTGAATGAGTTTTGACGTATTTGCCTGCCATTCTATCAAGCTTTCGATGC]

[+] EMBL AK068052             [GCGAAATGGATTTTTCAACCGGGTTTAGATCAATTACCTTTCACCTTCTCGTCTAGACCAGCCAAAGCCATAGCCGAAACTCACGGTCACGGTGCGTCCATGGATTTCGGACCTTGCAACGATACGCTCGACACCGAACTGCTACACGTGCTGACCTCCGGCGACGAGGTCCGCATGGCGGACCTGCTGGGCAGAGAACGCCGTGGCCATGGCCACTCCCTGTCCCAGGTGGCGATACGCGTCGACGACGACGACGACGGCCGCGCGCCGGCGGGAGCGAGCCGCCTCCTTGGCGTGACGACGGGCAACGGCAACACGGCGCTGCACGTGGCCGCCACCCGCGGGCACGCCGCGCTCGCGGCGCGTGGTCTGCGCGACGGCGCCCGCGCTGGCCGCCACGCGCAACAGGTTCCTCGACACGCCTCTGCACTGCGCGGCCAAGTCCGGGCACCGCGACGTGGCGGCCTGCCTCCTGTCAGAGATGCTGCGAGCCGGCGGCGCGGCGTCAGCGGCGCTGCCGCTGCGGCGGGCGACGAACTGCCTGGGCGCCACCGCCTTGCACGAGGCCGTGCGGAACGGCCACGCCGGGGTGGTGGCTCTCCTCATGGCGGAGGCTCCCGAGCTGGCCTCCGTGGCCAACGACGGTGGCGTCTCGCCGCTGTACCTGGCGGCGACGGTTGGCTCCGTGGACATTGTCCGGGCGCTGCTCCACCCGTTGCCTGATGGAACGCCCTCGCCGGCCTCGGCCGCTGGTCCGGACGGACGGACAGCTTTGCATTCTGCGGCAACTACTGGCAAAGAAATCGCGCGAGAAATACTGGACTGGAAGCCAGAGGGTCGAACACTGCTAACCAAAGCTGATTCGTCGGGCAGAACACCTCTCCACTTTGCTATATCATCACAAATTGAGCGGTTTGACGTGTTTCAGCTGTTCCTAGATGCAGAGCCCTCCCTAGCTCTGGTTTGTGATATCCAAGGATCATTTCCTTTGCATGTTGCTGCTGTGATGGGCAGTGTTAGGATCGTCGTTGAGCTCATACAGAAATGCCCCAACAACTACAACGATTTGGTCGATGATCGAGGAAGAAATTTTCTGCATTGTGCTGTTGAACATAACAAGGAAAGCATAGTTCGCTACATTTGCCGAGATGACAGGTTTGGTATCCTGATGAATGCAATGGACAATGAAGGAAATACTCCCCTCCATTTGGCCGCCGAGTATGGGCACCCAAGGATGGTCAGTTTACTCTTGGAGACGATGAGCGTCGATGTAGCCATTACCAACAGGGATGGTCTAACTGCTGCTGACCTTGCTTATCGCCATCTGCAACCTGGTTTGCACTATTTTCTGGTAATGGAACACGGTTCAGTTCATTAGTTCATCACAATTGGTTATCACGCAGCTGCAGAGAATCGTTTCATGTGCTGTCCTGTTTACTTGGCCAATTAATCTGTCTTCTTTCTTGTGATAATTTTTGTGTACAGAATCCTCGAGCCGTGGTAAAGAATCTCTTCTACTGCACCAGAGCACCGGTTACCCTAGAAGGGGATCATGCTAGGACTGGCATCCCATCGGCCATGGAGGATGCCGATGCTCCCAAGGACAGTGGTGGCGTGACATCCACCGGAACAGTCGCGTCCGTGCTGATCGCCACGGTGACGTTCGCGGCGGCTCTCACCGTTCCGGGGGGCTACGTCGCCGACGACCACCCGAACGCCGGGACGGCGGCGTCGGCCGGGCGGTTCGCCTTCAGGGCGTTCGCGGTGTCGGACACCATGGCGTTCCTCTGCTCCATCGTGGGCACCTGCCTCCTCGTCGTCGGCGAGGCGAGGGAGGTCCGGCCGAGCAGGGGCCGTCTCCGCGCCTACCAGGGGTCGGCGTGGGCGCTCGTGACGGCCGGGGCGCAGTTCATGGTCGCCGCGTTCGCGTTCGGGCTCCAGGTCGCGCTCGGCGGCGGCGCGGACAGCCGGTGGCTGGTGGTGTTCGTCCACGCGCTGTGCTCGGCATCGGTGCTGCTCTGCTTCCCGGGCATCTGGGCGCCGTTCTGCCTCGGGAAGGTGATCTGGAGGCGCGCCGGATGGCGAGGGCTCACGAATCTTCACCGGTGTCCGTCCAGTTTGGAAGAGTTCTTGTGGTGTTTCGTGACAAGCTTCTTGGCCAAAACTCTCTTGCGGACATTCCTCCCGGTGCTTATCGCGGTCACCTTGGTCGTCGCCATCGTGCTAAATATTGCAAAGCCCAACTGCTGAGTCGGCAAGAATTTGAGGATCGGAAGTCGTTAGTACTAGTTGGAGTATATTATTATAGCGTATGTGTTGAATGAGTTTTGACGTA                               ]
[+] EMBL AK060168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAACACGGTTCAGTTCATTAGTTCATCACAATTGGTTATCACGCAGCTGCAGAGAATCGTTTCATGTGCTGTCCTGTTTACTTGGCCAATTAATCTGTCTTCTTTCTTGTGATAATTTTTGTGTACAGAATCCTCGAGCCGTGGTAAAGAATCTCTTCTACTGCACCAGAGCACCGGTTACCCTAGAAGGGGATCATGCTAGGACTGGCATCCCATCGGCCATGGAGGATGCCGATGCTCCCAAGGACAGTGGTGGCGTGACATCCACCGGAACAGTCGCGTCCGTGCTGATCGCCACGGTGACGTTCGCGGCGGCTCTCACCGTTCCGGGGGGCTACGTCGCCGACGACCACCCGAACGCCGGGACGGCGGCGTCGGCCGGGCGGTTCGCCTTCAGGGCGTTCGCGGTGTCGGACACCATGGCGTTCCTCTGCTCCATCGTGGGCACCTGCCTCCTCGTCGTCGGCGAGGCGAGGGAGGTCCGGCCGAGCAGGGGCCGTCTCCGCGCCTACCAGGGGTCGGCGTGGGCGCTCGTGACGGCCGGGGCGCAGTTCATGGTCGCCGCGTTCGCGTTCGGGCTCCAGGTCGCGCTCGGCGGCGGCGCGGACAGCCGGTGGCTGGTGGTGTTCGTCCACGCGCTGTGCTCGGCATCGGTGCTGCTCTGCTTCCCGGGCATCTGGGCGCCGTTCTGCCTCGGGAAGGTGATCTGGAGGCGCGCCGGATGGCGAGGGCTCACGAATCTTCACCGGTGTCCGTCCAGTTTGGAAGAGTTCTTGTGGTGTTTCGTGACAAGCTTCTTGGCCAAAACTCTCTTGCGGACATTCCTCCCGGTGCTTATCGCGGTCACCTTGGTCGTCGCCATCGTGCTAAATATTGCAAAGCCCAACTGCTGAGTCGGCAAGAATTTGAGGATCGGAAGTCGTTAGTACTAGTTGGAGTATATTATTATAGCGTATGTGTTGAATGAGTTTTGACGTATTTGCCTGCCATTCTATCAAGCTTTCGATGC]


>consensus_1591#0 GCGAAATGGATTTTTCAACCGGGTTTAGATCAATTACCTTTCACCTTCTCGTCTAGACCA GCCAAAGCCATAGCCGAAACTCACGGTCACGGTGCGTCCATGGATTTCGGACCTTGCAAC GATACGCTCGACACCGAACTGCTACACGTGCTGACCTCCGGCGACGAGGTCCGCATGGCG GACCTGCTGGGCAGAGAACGCCGTGGCCATGGCCACTCCCTGTCCCAGGTGGCGATACGC GTCGACGACGACGACGACGGCCGCGCGCCGGCGGGAGCGAGCCGCCTCCTTGGCGTGACG ACGGGCAACGGCAACACGGCGCTGCACGTGGCCGCCACCCGCGGGCACGCCGCGCTCGCG GCGCGTGGTCTGCGCGACGGCGCCCGCGCTGGCCGCCACGCGCAACAGGTTCCTCGACAC GCCTCTGCACTGCGCGGCCAAGTCCGGGCACCGCGACGTGGCGGCCTGCCTCCTGTCAGA GATGCTGCGAGCCGGCGGCGCGGCGTCAGCGGCGCTGCCGCTGCGGCGGGCGACGAACTG CCTGGGCGCCACCGCCTTGCACGAGGCCGTGCGGAACGGCCACGCCGGGGTGGTGGCTCT CCTCATGGCGGAGGCTCCCGAGCTGGCCTCCGTGGCCAACGACGGTGGCGTCTCGCCGCT GTACCTGGCGGCGACGGTTGGCTCCGTGGACATTGTCCGGGCGCTGCTCCACCCGTTGCC TGATGGAACGCCCTCGCCGGCCTCGGCCGCTGGTCCGGACGGACGGACAGCTTTGCATTC TGCGGCAACTACTGGCAAAGAAATCGCGCGAGAAATACTGGACTGGAAGCCAGAGGGTCG AACACTGCTAACCAAAGCTGATTCGTCGGGCAGAACACCTCTCCACTTTGCTATATCATC ACAAATTGAGCGGTTTGACGTGTTTCAGCTGTTCCTAGATGCAGAGCCCTCCCTAGCTCT GGTTTGTGATATCCAAGGATCATTTCCTTTGCATGTTGCTGCTGTGATGGGCAGTGTTAG GATCGTCGTTGAGCTCATACAGAAATGCCCCAACAACTACAACGATTTGGTCGATGATCG AGGAAGAAATTTTCTGCATTGTGCTGTTGAACATAACAAGGAAAGCATAGTTCGCTACAT TTGCCGAGATGACAGGTTTGGTATCCTGATGAATGCAATGGACAATGAAGGAAATACTCC CCTCCATTTGGCCGCCGAGTATGGGCACCCAAGGATGGTCAGTTTACTCTTGGAGACGAT GAGCGTCGATGTAGCCATTACCAACAGGGATGGTCTAACTGCTGCTGACCTTGCTTATCG CCATCTGCAACCTGGTTTGCACTATTTTCTGGTAATGGAACACGGTTCAGTTCATTAGTT CATCACAATTGGTTATCACGCAGCTGCAGAGAATCGTTTCATGTGCTGTCCTGTTTACTT GGCCAATTAATCTGTCTTCTTTCTTGTGATAATTTTTGTGTACAGAATCCTCGAGCCGTG GTAAAGAATCTCTTCTACTGCACCAGAGCACCGGTTACCCTAGAAGGGGATCATGCTAGG ACTGGCATCCCATCGGCCATGGAGGATGCCGATGCTCCCAAGGACAGTGGTGGCGTGACA TCCACCGGAACAGTCGCGTCCGTGCTGATCGCCACGGTGACGTTCGCGGCGGCTCTCACC GTTCCGGGGGGCTACGTCGCCGACGACCACCCGAACGCCGGGACGGCGGCGTCGGCCGGG CGGTTCGCCTTCAGGGCGTTCGCGGTGTCGGACACCATGGCGTTCCTCTGCTCCATCGTG GGCACCTGCCTCCTCGTCGTCGGCGAGGCGAGGGAGGTCCGGCCGAGCAGGGGCCGTCTC CGCGCCTACCAGGGGTCGGCGTGGGCGCTCGTGACGGCCGGGGCGCAGTTCATGGTCGCC GCGTTCGCGTTCGGGCTCCAGGTCGCGCTCGGCGGCGGCGCGGACAGCCGGTGGCTGGTG GTGTTCGTCCACGCGCTGTGCTCGGCATCGGTGCTGCTCTGCTTCCCGGGCATCTGGGCG CCGTTCTGCCTCGGGAAGGTGATCTGGAGGCGCGCCGGATGGCGAGGGCTCACGAATCTT CACCGGTGTCCGTCCAGTTTGGAAGAGTTCTTGTGGTGTTTCGTGACAAGCTTCTTGGCC AAAACTCTCTTGCGGACATTCCTCCCGGTGCTTATCGCGGTCACCTTGGTCGTCGCCATC GTGCTAAATATTGCAAAGCCCAACTGCTGAGTCGGCAAGAATTTGAGGATCGGAAGTCGT TAGTACTAGTTGGAGTATATTATTATAGCGTATGTGTTGAATGAGTTTTGACGTATTTGC CTGCCATTCTATCAAGCTTTCGATGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)