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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1596#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3384 fasta sequence
[CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGGTTCCCAGCGGACCGTTCATAACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACCTCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAGCCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTGCTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTAGCAAGGTTTTAGATAGACACCATGTCTGACGTCGCAAACTCGACTTCCCCCGCCCCGGAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAGGCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTCGGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGCCAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCCTATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACTGTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTGGGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCTATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTACGTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCACGGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGCTTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACTGAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAGGAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTCAACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTCACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGCTCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCTGAGAAGACCGAGGAGGGTGCCGAGGAGAAGAAGGATGAGAACAAGCCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAGAAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAGAACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTCCCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGCCGTGGTGCTGGTTTCCCTGGCGGTATGCCTCAGCAGGGTGGCCGTGGCGGTCCCAACGGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCATACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGCGGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCAATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGCATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGCGGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAGCAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTTGCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACCACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATACGCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAGAAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAACGGCAGCAAGTTATGATGGTTGCATGATTTCCTTGAATGGCGAATGGCGCACGGGTAACGGTTTTCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAAGTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGTTGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGACTAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCGGACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAGACGGGCACCCCGGGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGACTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCTACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGAATTTCGCACATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGGATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCATGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGAGAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATATAGCC]
[+] EMBL AK119744 [CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGGTTCCCAGCGGACCGTTCATAACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACCTCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAGCCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTGCTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTAGCAAGGTTTTAGATAGACACCATGTCTGACGTCGCAAACTCGACTTCCCCCGCCCCGGAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAGGCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTCGGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGCCAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCCTATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACTGTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTGGGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCTATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTACGTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCACGGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGCTTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACTGAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAGGAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTCAACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTCACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGCTCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTCTGAGAAGACCGAGGAGGGTGCCGAGGAGAAGAAGGATGAGAACAAGCCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTCGGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAGAAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAGAACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTCCCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGCCGTGGTGCTGGTTTCCCTGGCGGTATGCCTCAGCAGGGTGGCCGTGGCGGTCCCAACGGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCATACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGCGGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCAATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGCATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGCGGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAGCAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTTGCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACCACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATACGCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAGAAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAACGGCAGCAAGTTATGATGGTTGCATGATTTCCTTGAATGGCGAATGGCGCACGGGTAACGGTTTTCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAAGTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGTTGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGACTAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCGGACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAGACGGGCACCCCGGGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGACTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCTACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGAATTTCGCACATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGGATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCATGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGAGAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATATAGCC]
consensusID : consensus_1596#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3099 fasta sequence
[ACCACCCAACTACACCCACCGCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATAACAGAAAAAGAAACAAAAAAATACAGAAAATCCTCAAAAGCCCCGACGACCGCCAACCCGCCCCTCGTCACCTACTGTCGCTTGCTCCTCGACAGTAACGCGACTTCTCCCTCACCAGTTCCGCATACACAAAAGCCGCGCGCTCGCCTGTGTGTCTCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACACTCTTCCGCAACTCGCCAGAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAGGACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAGGCCCCCACCCCCACCACCGCTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTCGGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGCCAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCATATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACCGTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTCGGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCCATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTACGTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCACGGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGTTTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACCGACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTCAATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTCACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGCGCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAGAAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAGGCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTTGGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAGAAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAGAACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTACCCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGACGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAATGCTCAGCAGATGCCCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCTGGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGCGGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAGATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGCGGTCCCGGCGGCCGTGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGTCCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAGCAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTGGCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACCTCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATACGTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAGAAGGCTTAATCTTGTCACAGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAAGGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTTCACGGTTTCTTTCTTACGCTAGGCGGACGGCTTTACGAATTCCCCCAAAAGTTCTCATGATTCCTCAAAGGCTGGGTCCACCTTCCTCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCGGCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTTCATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGGGCGGGTTCGCAATAGCCCTTGCAGAGATACCTCAAGCAGGTTGCCCATGGCCTGGCTTACGTTCAGTTAATTATGGCAGACGTATGGTGGATGTCGGACATGATTTATGTCTGAGAGATGTGGTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGGACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT]
[+] EMBL AK110296 [ACCACCCAACTACACCCACCGCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATAACAGAAAAAGAAACAAAAAAATACAGAAAATCCTCAAAAGCCCCGACGACCGCCAACCCGCCCCTCGTCACCTACTGTCGCTTGCTCCTCGACAGTAACGCGACTTCTCCCTCACCAGTTCCGCATACACAAAAGCCGCGCGCTCGCCTGTGTGTCTCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACACTCTTCCGCAACTCGCCAGAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAGGACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAGGCCCCCACCCCCACCACCGCTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTCGGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGCCAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCATATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACCGTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAGACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTCCACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTCGGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCCATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATCCCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTACGTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCACGGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGTTTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACCGACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAGGAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTCAATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTCACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGCGCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAGAAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAGGCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTTGGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAGAAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAGAACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAGCAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTACCCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGACGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAATGCTCAGCAGATGCCCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCTGGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGCGGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAGATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGCGGTCCCGGCGGCCGTGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGTCCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAGCAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTGGCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACCTCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATACGTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAGAAGGCTTAATCTTGTCACAGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAAGGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTTCACGGTTTCTTTCTTACGCTAGGCGGACGGCTTTACGAATTCCCCCAAAAGTTCTCATGATTCCTCAAAGGCTGGGTCCACCTTCCTCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCGGCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTTCATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGGGCGGGTTCGCAATAGCCCTTGCAGAGATACCTCAAGCAGGTTGCCCATGGCCTGGCTTACGTTCAGTTAATTATGGCAGACGTATGGTGGATGTCGGACATGATTTATGTCTGAGAGATGTGGTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGGACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1596#0 -CCACCCCAACAACACTCACCAGCTCTCCCAGCCTCGG--TTCCCAGCGGACCGTTCATA 57
consensus_1596#1 ACCACCC-AACTACACCCACC-GCTCTTCAAGCCCCCGGTTCCCCAGCGGACCGTACATA 58
****** *** **** **** ***** * **** * * * ************* ****
consensus_1596#0 ACACAAAAAGAAACAAAAAAATACAGAAAACAACAAGAAAAGCCCGTCCGACGACGAACC 117
consensus_1596#1 ACAGAAAAAGAAACAAAAAAATACAGAAAAT--CCTCAAAAGCCCCGACGACCGCCAAC- 115
*** ************************** * ******** **** * ***
consensus_1596#0 TCCGCCAACTTCTTCGTCCTTGTCCTGTCGCCTGCAACCCGACAGACAATCCTGCTTCAG 177
consensus_1596#1 -CCGCC-----CCTCGTCACC-TACTGTCGCTTGCTCCTCGACAG-TAACGCGACTTC-- 165
***** * ***** * ******* *** * ****** ** * ****
consensus_1596#0 CCACCCCCCACCTTTTTCGCATAGAAGAAGGAATTCCAGCGTGTCCGCAGCCAAACCGTG 237
consensus_1596#1 ---TCCCTCACCAGTTCCGCATACACAAAAG-----CCGCGCGCTCGC---CTGTGTGTC 214
*** **** ** ****** * ** * * *** * *** * **
consensus_1596#0 CTCTTGGACCGCTTTCTACCACTTCTGCTACCCCGCACACATCTCTTGTTGCAACTTCTA 297
consensus_1596#1 TCCAGCGAACTTTGACGTCGCCTTGCACTACCCCGCACACA-CTCTT-CCGCAACTCGCC 272
* ** * * * * *** ************** ***** ******
consensus_1596#0 GCAAGGTTTTAGATAGACACCATGTCTG---ACGTCGCAAACTCGACTTCCCCCGCCCCG 354
consensus_1596#1 A-GAAGCGCAAGATAACCACAATGTCTGCTGAAGCTGCCAACGCCGCGTTGCCCGTCCAG 331
* * ***** *** ******* * * ** *** * * * **** ** *
consensus_1596#0 GAGGGTGTTGACGCCAACGGCGCTCAGATCAACACCAACGTCGCTGCTGCCCAGGCTGAG 414
consensus_1596#1 GACGGTGCTGATGCCAGCAACACCCAGATCAACACCAACGTCGCTGCTGCCGGCGCTGAG 391
** **** *** **** * * * *************************** ******
consensus_1596#0 GCTCCCACCCCGACCTCTGCGGCTCCCGCCCACAACCAAAACTCGGCCTCGCTCTATGTC 474
consensus_1596#1 GCCCCCACCCCCACCACCG---CTCAGGCAGCACACCAGAACTCGGCGTCGCTCTATGTC 448
** ******** *** * * *** ** **** ******** ************
consensus_1596#0 GGCGAGCTCGACCCCTCTGTCACCGAGGCTATGCTCTTCGAGCTGTTCTCTTCCATTGGC 534
consensus_1596#1 GGAGAGCTCGACCCCTCTGTCACCGAGGCCATGCTCTTTGAGCTGTTCTCCTCCATCGGC 508
** ************************** ******** *********** ***** ***
consensus_1596#0 CAAGTCGCTTCCATCCGTGTCTGCCGTGACGCTGTTACCCGTCGCTCGCTCGGTTACGCC 594
consensus_1596#1 CAGGTCGCCTCGATCCGTGTCTGCCGTGACGCCGTCACCCGTCGCTCGCTCGGCTACGCA 568
** ***** ** ******************** ** ***************** *****
consensus_1596#0 TATGTTAACTACAACAGCTCTGAGGACGGCGAAAAGGCCCTCGAAGAGCTCAACTACACT 654
consensus_1596#1 TATGTTAACTACAACAGCTCTGAGGACGGCGAGAAGGCCCTCGAGGAGCTCAACTACACC 628
******************************** *********** **************
consensus_1596#0 GTTATCAAGGGCAAGCCCTGCCGCATCATGTGGTCTCAGCGCGACCCCGCTCTGCGCAAG 714
consensus_1596#1 GTCATCAAGGGCAAGCCATGCCGCATCATGTGGTCGCAGCGCGACCCCGCTCTGCGCAAG 688
** ************** ***************** ************************
consensus_1596#0 ACTGGCCAAGGCAACGTCTTCATCAAGAACCTGGACCACGCCATTGACAACAAGGCGCTC 774
consensus_1596#1 ACTGGCCAGGGCAACGTCTTCATCAAGAACCTCGACCACGCCATTGACAACAAGGCGCTC 748
******** *********************** ***************************
consensus_1596#0 CACGACACCTTCGCCGCCTTCGGTAACATTCTCAGCTGCAAGGTCGCTCAGGACGAACTG 834
consensus_1596#1 CACGACACCTTCGCCGCTTTTGGTAACATCTTGAGCTGCAAGGTCGCGCAGGACGAGCTC 808
***************** ** ******** * ************** ******** **
consensus_1596#0 GGTAACTCCAAGGGCTACGGATTTGTCCACTACGAGACTGCCGAGGCCGCTAACAATGCT 894
consensus_1596#1 GGCAACTCCAAGGGCTACGGATTCGTCCACTATGAGACCGCCGAGGCCGCCAACAACGCC 868
** ******************** ******** ***** *********** ***** **
consensus_1596#0 ATCAAGCACGTTAACGGTATGTTGTTGAACGAGAAGAAGGTTTTCGTCGGCCACCACATC 954
consensus_1596#1 ATCAAGCACGTCAACGGCATGTTGCTGAACGAGAAGAAGGTCTTCGTCGGCCACCACATC 928
*********** ***** ****** **************** ******************
consensus_1596#0 CCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGGTGAAGGCCAACTTCACCAACATCTAC 1014
consensus_1596#1 CCCAAGAAGGAGCGCATGAGCAAGTTCGAGGAGATGAAGGCCAACTTCACCAACATCTAC 988
********************************* **************************
consensus_1596#0 GTCAAGAACATTGACCTTGATGTCACTGACGACGAGTTCCGTGAGCTCTTCGAGAAGCAC 1074
consensus_1596#1 GTCAAGAACATCGACCTCGAGGTCACCGACGAGGAGTTCCGCGACCTCTTCGAGAAGCAC 1048
*********** ***** ** ***** ***** ******** ** ***************
consensus_1596#0 GGTGACATCACTTCTGCCTCCATTGCTCGTGACGAGCAGGGAAAGAGCCGCGGGTTCGGC 1134
consensus_1596#1 GGCGACATCACCTCCGCCTCTATTGCTCGCGATGACCAGGGCAAGAGCCGTGGTTTCGGT 1108
** ******** ** ***** ******** ** ** ***** ******** ** *****
consensus_1596#0 TTCGTCAACTACATCAAGCACGAGGCTGCTTCTGCTGCCGTCGAGGCCCTCAACGACACT 1194
consensus_1596#1 TTCGTCAACTACATCCGCCACGAGGCTGCTGCTGTTGCCGTCGACACTCTGAACGACACC 1168
*************** ************ *** ********* * ** ********
consensus_1596#0 GAGTTCCGTGGCCAGAAGCTCTACGTTGGCCGCGCACAGAAGAAGCACGAGCGCGAGGAG 1254
consensus_1596#1 GACTTCAAGGGCCAGAAGCTCTACGTCGGCCGCGCCCAGAAGAAGCACGAGCGTGAGGAG 1228
** *** ***************** ******** ***************** ******
consensus_1596#0 GAGCTGCGCAAGCAGTACGAGGCCGCTCGTCTCGAGAAGCAGTCCAAGTACCAGGGTGTC 1314
consensus_1596#1 GAGCTGCGCAAGCAGTACGAGGCTGCCCGCCTGGAGAAGCAGTCCAAGTACCAGGGTGTC 1288
*********************** ** ** ** ***************************
consensus_1596#0 AACCTCTACATCAAGAACTTGAACGACGACGTCGATGACGAGAAGCTGCGCGACATGTTC 1374
consensus_1596#1 AATCTGTACATCAAGAACCTCAACGACGATGTCGATGACGAGAAGCTCCGCGATATGTTC 1348
** ** ************ * ******** ***************** ***** ******
consensus_1596#0 ACTCCTTTCGGTACCATCACCTCAGCCAAGGTCATGCGTGATGCCATGCCTGCTGAGCGC 1434
consensus_1596#1 ACTCCCTTCGGCACCATCACCTCCGCCAAGGTCATGCGCGATGCCATGCCCGCTGAGCGC 1408
***** ***** *********** ************** *********** *********
consensus_1596#0 TCCGAGACCCCTGCCGACGAGAAGAAGGAGGAGTCCAAGGAGGAGTCCAAGGAGGAGTC- 1493
consensus_1596#1 GCCGAGTCTCCTGCCGCTGAGGAGAAGAAGGAGGAGGAGGAGGAAAAGAAGGAGGAGAAG 1468
***** * ******* *** ***** ***** ******* *********
consensus_1596#0 --------TGAGAAGACCGAGGAGGG------TGCCGAGGAGAAGAAGGATGAGAACAAG 1539
consensus_1596#1 AAGGACGATGAGGAGGCCAAGGATGGCTCTTCTGGCGAGCAGAACGGCGAGGACACCAAG 1528
**** ** ** **** ** ** **** **** ** ** * ****
consensus_1596#0 CCTGGCGAGAAGGTCACCATCAAGGGTGAGAAGAAGATTCTTGGCAAGAGCAAGGGCTTC 1599
consensus_1596#1 GCCGGTGACAAGGTCACCATCAAGGGCGAGAAGAAGATCCTCGGTAAGAGCAAGGGCTTT 1588
* ** ** ***************** *********** ** ** **************
consensus_1596#0 GGTTTCGTCTGCTTCAGCAACCCCGATGAGGCTACCAAGGCCGTCACCGAGATGAACCAG 1659
consensus_1596#1 GGTTTCGTCTGCTTCAGCAACCCCGACGAGGCTACCAAGGCTGTTACCGAGATGAATCAG 1648
************************** ************** ** *********** ***
consensus_1596#0 AAGATGATTGAGGGCAAGCCTCTCTACGTCGCCCTTGCCCAGCGCAAGGATGTCCGTAAG 1719
consensus_1596#1 AAGATGATCGAGGGCAAGCCTCTCTACGTCGCTCTCGCCCAGCGCAAGGACGCCCGCAAG 1708
******** *********************** ** ************** * *** ***
consensus_1596#0 AACCAGCTCGAGGCCACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAG 1779
consensus_1596#1 AACCAGCTTGAGGCTACTATCCAGGCCCGCAACCAGCTCCGCATGCAGCAGCAACAGCAG 1768
******** ***** *********************************************
consensus_1596#0 CAGCAGTTCGGCGGTATCCCCCAGATGTTCATCGCCCCCGGTCAGCAGCCCATGATGTTC 1839
consensus_1596#1 CAGCAGTTCGGCGCCATTCCTCAGATGTTCATGGCCCCTGGACAGCAGCCCATGATGTAC 1828
************* ** ** *********** ***** ** **************** *
consensus_1596#0 CCAGCTGGTGGTCGTGGCCAGATGCCATTCCCCGCTGGCATGCCCGGCCAACAAGGTGGC 1899
consensus_1596#1 CCTCCTGGTGCTCGTGGCCAGATGCCCTTCCCTGCCGGCATGCCAGGTCCTCAGGGTGGA 1888
** ****** *************** ***** ** ******** ** * ** *****
consensus_1596#0 CGTGGTGCTGGTTTCCCTGGCGGTATGCCT---CAGCAGGGTGGCCGTGGCGGTCCCAAC 1956
consensus_1596#1 CGTGGTGCTGGCTTCCCCGGTGGCATGCCCGGCCAGCAGGGCGGCCGCGGTGGTCCCAAT 1948
*********** ***** ** ** ***** ******** ***** ** ********
consensus_1596#0 GGCCAGCAGATGCCTCCTATGTACATGCCCCCTGGCATGGCTCCCGGTGCCTTCCCTCCA 2016
consensus_1596#1 GCTCAGCAGATGC---CCATGTACATGCCTCCCGGTATGGCTCCTGGCGCATTCCCTCCT 2005
* ********** * *********** ** ** ******** ** ** ********
consensus_1596#0 ------TACATGAACCAGCAATATATGCAGTTGGCACAGGCCGCACAGCAGGCCATGGGC 2070
consensus_1596#1 GGCCCTTACATGAACCAGCAGTACATGCAGCTCGCACAAGCTGCTCAACAGGCCATGGGC 2065
************** ** ****** * ***** ** ** ** ************
consensus_1596#0 GGACGTGGTGGCCGTGGTGGCGTCCCTATGGCTCCTATGCCCGGTATGCCCCAGGTCCCA 2130
consensus_1596#1 GGCGGACGTGGTGGTCGTGGTGGCCCCATGGGTGCCATGCCCGGCATGCCTCAAGGACAG 2125
** * **** ** **** * *** **** * * ******** ***** ** * *
consensus_1596#0 ATGGCTGGTGGTCCCGGTATGCGCGCCGGTCAGGGCTTCCCTCCTCAGGGTGGTCGCGGC 2190
consensus_1596#1 ATGGCTGGTGGCCCTGGTATGCGCGGCGGTCAAGGTGGCTTCCCTCAGGGTGGCCGTGGC 2185
*********** ** ********** ****** ** * *********** ** ***
consensus_1596#0 ATGCCCCAGGGCGGCCGACCTGGTCAGTCCCCTATGCCCGGCTACCCTCAGGGTGGACGC 2250
consensus_1596#1 GGTCCC---GGCGGCCG---TGGTCAGCCTCCTGTGCCCGGCTTCCCCCAGGGTGGTCGT 2239
*** ******** ******* * *** ********* *** ******** **
consensus_1596#0 GGCGGTCCCGCCGGTGCTGGCGTCGACATGAGCGCTTTGAGCGGCGCTGCTCCTGGCCAG 2310
consensus_1596#1 CCCGGCGCTGGTGGCCCAGGTGTTGACATGAGCGTCCTCAACGCCGCTGCCCCTGGCCAG 2299
*** * * ** * ** ** ********** * * ** ****** *********
consensus_1596#0 CAGAAGCAGATGCTCGGTGAGGCCCTCTACCCCAAGATCGCTGAGATGCAGCCCGAGCTT 2370
consensus_1596#1 CAGAAGCAGATGCTTGGTGAGGCTCTCTACCCCAAGATCCACGAGATGCAGCCCGAGCTG 2359
************** ******** *************** *****************
consensus_1596#0 GCCGGCAAGATCACCGGTATGCTTCTCGAGATGGACAACAGCGAGCTGATCAACCTCACC 2430
consensus_1596#1 GCCGGCAAGATCACCGGCATGCTTCTGGAGATGGACAACAGCGAGCTCATCAACCTCACC 2419
***************** ******** ******************** ************
consensus_1596#0 ACTGATGAGGCTGCTCTGCGTGCCAAGGTCGAGGAGGCCATGAGCGTCTATGACGAATAC 2490
consensus_1596#1 TCGGACGAGGCCGCTCTCCGTGCCAAGGTCGACGAGGCCATGAGCGTATACGACGAATAC 2479
* ** ***** ***** ************** ************** ** *********
consensus_1596#0 GCCAAGAACAAAGAGGGTGAGCCTGAAGAGAAAGCCCCCAAGGAGGAGTCCAAGGAGGAG 2550
consensus_1596#1 GTCAAGAACAAAGAGGGTGAGGGTGAAAAGGAGGCCCCCAAGGAGGAGTCCAAAGACGAG 2539
* ******************* **** ** * ******************** ** ***
consensus_1596#0 AAGGCTTAAACCTATTTCTAGTTGCCACTGAGTAGGGTTCGGTCCGCGCCACCCTCCAAC 2610
consensus_1596#1 AAGGCTTAATCTTGTCAC-AGTTGCCACCGAGTAGGACTCGATCCGTGTCACTCTCGAAA 2598
********* * * * * ********* ******* *** **** * *** *** **
consensus_1596#0 GGCAGCAAGTTATGATGGTTGCATGATTTC----CTTG-AATGGCGAATGGCGCACGGGT 2665
consensus_1596#1 GGCAGCCTCTCGTGACGGTTCGGTAACCTCACAGCTTACGATGGCGAATGGCGTACGGTT 2658
****** * *** **** * * ** *** ************* **** *
consensus_1596#0 AACGGTTT---TCTCACGACATACGGGACGACTTTCATGACCGATTGTTACCCCCCAAAA 2722
consensus_1596#1 CACGGTTTCTTTCTTACGCTAGGCGG-ACGGCTTT----ACGAATT-----CCCCCAAAA 2708
******* *** *** * *** *** **** ** *** *********
consensus_1596#0 GTTTCTTACGATTCGATGTCCCCCTTTACTTCATCGACTTGTCTCTGCCTCGCGGCGGGT 2782
consensus_1596#1 GTT-CTCATGATTC---------------CTCAAAGGCT-GGGTCCACCTTCC------- 2744
*** ** * ***** *** * ** * ** *** *
consensus_1596#0 TGACTACGATGACCCTCTTTTGACATCTGACTCCTTGAGTGGAATGTCGGGTGTCACGAC 2842
consensus_1596#1 ------------TCTTTCCTCGGCGTCCGATCCCTTCACTGGATCCTCGTTCGTCG---- 2788
* * * * * ** ** **** * **** *** ***
consensus_1596#0 TAAGACTGCCCAAACTCAATTTCGAGAGTTGGGTAGCTTCTTGTCGTACCTTTTTCTCCG 2902
consensus_1596#1 -------GCCCAAATTCGATCTTCAGAGTTGGGTTTCTCCTT------------------ 2823
******* ** ** * ********** ** ***
consensus_1596#0 GACAGGCTTTTTTCTTTCTTCCTTTTATCCCTCTGGTTTTTACTTTCCTATGTATGATAG 2962
consensus_1596#1 --CATGCTTTCCTTCACTTGTTTATTGTATCATAGACGGCCAGTCTGCAGAGAGATGTGG 2881
** ***** * * * ** * * * * * * * * * *
consensus_1596#0 ACGGGCACCCCG-GGTTCTGACGATGATGGCCATGGGTGTGCAGTGTGTGTGCGGTGGGA 3021
consensus_1596#1 GCGGGTTCGCAATAGCCCTTGCAGAGATACCT-----CAAGCAGGTTGCCCATGGCCTGG 2936
**** * * * ** * *** * **** ** ** *
consensus_1596#0 CTTTTGTTCGCGCAAAAACAGTTTGATACCTCGACCAGCCCAAGGGTCTTCGTTGCATCT 3081
consensus_1596#1 CTTACGTTCAGTTAATTATGGC---AGACGTATGGTGGATGTCGGACATGATTTATGTCT 2993
*** **** ** * * * ** * * ** * ** ***
consensus_1596#0 ACAGGCCGGGCTGGCTTTCCAACGCTGTACGGGAATTTTCGGCGTCTCGA-ATTTCGCAC 3140
consensus_1596#1 GAGAGATGTG-------------GTCGTACGTGGATCTGGTCAAACTGGATAGCTCACGG 3040
* * * * ***** * ** * ** ** * ** *
consensus_1596#0 ATGAGACTAGGGAACTATGGATGATGATGATGATGATGATGAATGCATGGGGTAGGATGG 3200
consensus_1596#1 ACGTAGTGGAGGAAGCATAAGATCTTATGGACGTAGTAGTACATACTCCCAATAGATCT- 3099
* * **** ** * *** * * * ** * ***
consensus_1596#0 ATAGATGGATGGATGGGTGGGTGGGTGGATATGTTATGGTGGATATATGGGATATGTGCA 3260
consensus_1596#1 ------------------------------------------------------------
consensus_1596#0 TGTGGTGTGTTCACGAGTTTATTGCCCATGCCATCTGGAACAGACTGGATGGCTCGATGA 3320
consensus_1596#1 ------------------------------------------------------------
consensus_1596#0 GAGAAATTGTGTCTGTGTGAGGGTGGTGGAGGAGGTGGTGGACAGCATGTTAGGGAATAT 3380
consensus_1596#1 ------------------------------------------------------------
consensus_1596#0 AGCC 3384
consensus_1596#1 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||