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Oryza sativa
cluster # 1601 cluster # 1601       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1601#0 length = 1480 sequences # 2  

consensusID : consensus_1601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1480
fasta sequence
                              [GTCATCTGATGCTACCAACGAGAAATCCCAATTTACTACAGTAGACGTCTCCAATATGAATGATGACGATCTAAATATTGGAGTTCTTGATATTCTATTTTCTGGGTTTCTTAAAGATGATTGGGAGTTTAATCTTGAAGGTGATAATCATGATAATGTCCCAACCATTCTTGGTGAAGGTTTTGCAAAAATTCTTCTTCTAAGCGAGAACTATGCAAGGATATCTGCTGACTTGCATCCTATAATCCTGGCTCGACTTGTCAGTTTGTATTTCATGGAGGAAACTAAAGAACTTAAAAGATTGAAACAGTGTCTGTCTGTCTTCTTTCAGCACTATCCAGCCCTTTCAGACAAACACAAGAGGTGTGTCTCCAGTGCATTTGTGCCAGTCATGAGAGCCATGTGGCCAGGTTTATATGGTAATGTTGGGGGTAGTGCACATGCTGTTTCAAAAAGGCGCAAATATGCTGCCCAAGCTGCTCGTTTTATGGTTCAAATGGTACAAACTCCACTCTTTTCGACCGAAACTACGGAGCAAGCTAGTTCGAGTCCTGAAAGCCAGTCAACTAAACCAGATATGTTGAACAATTTCGACATTAGTGAGGAAGGGCTTGCCATCCGTATTGCAGTTGAGGTAGCAAATTGCCCGGATAAGAAGACTGCAGCTGCGAAAGCATATTGTTTGGCATTGTGCAAGGTTGCTGTGCTTCTGAGATTCCGGCAATCCGAACAGAAGGCAATCAAATGCATGAGAGGATTGATCAATGCATTGGCTGCTTCGGCTTCTTCCGATAAGGACCTTATGAAGGAGCTGTCTCAAATGGCATCACGGCTTAGATCGCTCGATGAGCACCCGGAAGAAGAGTTGCCACAAGATGAAGCTGAAGAAATATTCAAGAAACTAGGATTGGATGCTGGCTTCAGGTTGGAGACCAATTCTGTGGTGCCACCAACGCCAGCACCACGGTCAGTCCGGCCTCCTCCCAGCAGGAGAAGGGCGAGACGGTCGCCATCCTCCAGCGATGACAGTGACATAGATGGCCAGGAGGATAACTTGCACGCGACGTCGGTGAGCCGTGTTGCGGCCACTCCGGTGGTGATGACCGCGGCTCGTTCGCAGGGAGCAAGCAAGACGGCGGCGATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGACCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAAACCTTAGTTTATCTCTTTAGATGATGCTGGCGTTCTTGGCCGAGAGAACCCGGCAATATAGCTATTTAAATTATGGTGATGGCTTCGACATGTCGCTACCCACTCGTCTCTGTATGTTTTGTATCGTGTATGACAAACTGTATCCAAATTCGAGTACATGCAGTATGATTATGCTACAAAAATGTTTATCTGATTTAGGATGATGTTTTGTGTACCAAAAAAAAAAAA]

[+] EMBL AK119768             [GTCATCTGATGCTACCAACGAGAAATCCCAATTTACTACAGTAGACGTCTCCAATATGAATGATGACGATCTAAATATTGGAGTTCTTGATATTCTATTTTCTGGGTTTCTTAAAGATGATTGGGAGTTTAATCTTGAAGGTGATAATCATGATAATGTCCCAACCATTCTTGGTGAAGGTTTTGCAAAAATTCTTCTTCTAAGCGAGAACTATGCAAGGATATCTGCTGACTTGCATCCTATAATCCTGGCTCGACTTGTCAGTTTGTATTTCATGGAGGAAACTAAAGAACTTAAAAGATTGAAACAGTGTCTGTCTGTCTTCTTTCAGCACTATCCAGCCCTTTCAGACAAACACAAGAGGTGTGTCTCCAGTGCATTTGTGCCAGTCATGAGAGCCATGTGGCCAGGTTTATATGGTAATGTTGGGGGTAGTGCACATGCTGTTTCAAAAAGGCGCAAATATGCTGCCCAAGCTGCTCGTTTTATGGTTCAAATGGTACAAACTCCACTCTTTTCGACCGAAACTACGGAGCAAGCTAGTTCGAGTCCTGAAAGCCAGTCAACTAAACCAGATATGTTGAACAATTTCGACATTAGTGAGGAAGGGCTTGCCATCCGTATTGCAGTTGAGGTAGCAAATTGCCCGGATAAGAAGACTGCAGCTGCGAAAGCATATTGTTTGGCATTGTGCAAGGTTGCTGTGCTTCTGAGATTCCGGCAATCCGAACAGAAGGCAATCAAATGCATGAGAGGATTGATCAATGCATTGGCTGCTTCGGCTTCTTCCGATAAGGACCTTATGAAGGAGCTGTCTCAAATGGCATCACGGCTTAGATCGCTCGATGAGCACCCGGAAGAAGAGTTGCCACAAGATGAAGCTGAAGAAATATTCAAGAAACTAGGATTGGATGCTGGCTTCAGGTTGGAGACCAATTCTGTGGTGCCACCAACGCCAGCACCACGGTCAGTCCGGCCTCCTCCCAGCAGGAGAAGGGCGAGACGGTCGCCATCCTCCAGCGATGACAGTGACATAGATGGCCAGGAGGATAACTTGCACGCGACGTCGGTGAGCCGTGTTGCGGCCACTCCGGTGGTGATGACCGCGGCTCGTTCGCAGGGAGCAAGCAAGACGGCGGCGATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGACCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAAACCTTAGTTTATCTCTTTAGATGATGCTGGCGTTCTTGGCCGAGAGAACCCGGCAATATAGCTATTTAAATTATGGTGATGGCTTCGACATGTCGCTACCCACTCGTCTCTGTATGTTTTGTATCGTGTATGACAAACTGTATCCAAATTCGAGTACATGCAGTATGATTATGCTACAAAAATGTTTATCTGATTTAGGATGA                         ]
[-] EMBL CA761583             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                aGAGGACGAGACAAGGGGGCGATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGACCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAAACCTTAGTTTATCTCTTTAGATGATGCTGGCGTTCTTGGCCGAGAGAACCCGGCAATATAGCTATTTAAATTATGGTGATGGCTTCGACATGTCGCTACCCACTCGTCTCTGTATGTTTTGTATCGTGTATGACAAACTGTATCCAAATTCGAGTACATGCAGTACGATTATGCTACAAAAATGTTTATCTGATTTAGGATGATGTTTTGTGTACCAAAAAAAAAAAA]


>consensus_1601#0 GTCATCTGATGCTACCAACGAGAAATCCCAATTTACTACAGTAGACGTCTCCAATATGAA TGATGACGATCTAAATATTGGAGTTCTTGATATTCTATTTTCTGGGTTTCTTAAAGATGA TTGGGAGTTTAATCTTGAAGGTGATAATCATGATAATGTCCCAACCATTCTTGGTGAAGG TTTTGCAAAAATTCTTCTTCTAAGCGAGAACTATGCAAGGATATCTGCTGACTTGCATCC TATAATCCTGGCTCGACTTGTCAGTTTGTATTTCATGGAGGAAACTAAAGAACTTAAAAG ATTGAAACAGTGTCTGTCTGTCTTCTTTCAGCACTATCCAGCCCTTTCAGACAAACACAA GAGGTGTGTCTCCAGTGCATTTGTGCCAGTCATGAGAGCCATGTGGCCAGGTTTATATGG TAATGTTGGGGGTAGTGCACATGCTGTTTCAAAAAGGCGCAAATATGCTGCCCAAGCTGC TCGTTTTATGGTTCAAATGGTACAAACTCCACTCTTTTCGACCGAAACTACGGAGCAAGC TAGTTCGAGTCCTGAAAGCCAGTCAACTAAACCAGATATGTTGAACAATTTCGACATTAG TGAGGAAGGGCTTGCCATCCGTATTGCAGTTGAGGTAGCAAATTGCCCGGATAAGAAGAC TGCAGCTGCGAAAGCATATTGTTTGGCATTGTGCAAGGTTGCTGTGCTTCTGAGATTCCG GCAATCCGAACAGAAGGCAATCAAATGCATGAGAGGATTGATCAATGCATTGGCTGCTTC GGCTTCTTCCGATAAGGACCTTATGAAGGAGCTGTCTCAAATGGCATCACGGCTTAGATC GCTCGATGAGCACCCGGAAGAAGAGTTGCCACAAGATGAAGCTGAAGAAATATTCAAGAA ACTAGGATTGGATGCTGGCTTCAGGTTGGAGACCAATTCTGTGGTGCCACCAACGCCAGC ACCACGGTCAGTCCGGCCTCCTCCCAGCAGGAGAAGGGCGAGACGGTCGCCATCCTCCAG CGATGACAGTGACATAGATGGCCAGGAGGATAACTTGCACGCGACGTCGGTGAGCCGTGT TGCGGCCACTCCGGTGGTGATGACCGCGGCTCGTTCGCAGGGAGCAAGCAAGACGGCGGC GATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGA CCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAAACCTTAGT TTATCTCTTTAGATGATGCTGGCGTTCTTGGCCGAGAGAACCCGGCAATATAGCTATTTA AATTATGGTGATGGCTTCGACATGTCGCTACCCACTCGTCTCTGTATGTTTTGTATCGTG TATGACAAACTGTATCCAAATTCGAGTACATGCAGTATGATTATGCTACAAAAATGTTTA TCTGATTTAGGATGATGTTTTGTGTACCAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)