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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16052#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 869 fasta sequence
[TCTTCCCTCCTCTTAGACCGCCGCCGCCACCGAGCCACTGCTTCTTCTGTGCGGAGAGAGAGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC-GGCC-AAGGCCATGGG-GAGGGATCTCA-GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT-ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC-AAA-TC-AGCCAGGTTCATTTT-GG-ATC-TGCTG-AA-GAA-T-GC-TG-AGAG-T-AA-CGCTG-ATG-TT-AAA-GGC-TTGGAT-GTCG-ACAACCTCTTCGTTT-CACACAT-CCAGGTGAA-CCA-AGCCCAGAAG-CAGAG-ACGCC-GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG-CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA-CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA-TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTACAAAAGCGTCA---TCAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTT]
[+] EMBL AK120448 [TCTTCCCTCCTCTTAGACCGCCGCCGCCACCGAGCCACTGCTTCTTCTGTGCGGAGAGAGAGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTA ]
[+] EMBL CK085121 [ CGAGCCACTGCTTCTTCTGTGCGGAGAGAGAGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAG ]
[+] EMBL CF298413 [ TTCTGTGCGGAGAGAGAGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAAGGGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGC ]
[+] EMBL AK062052 [ GAGAGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAA ]
[+] EMBL OSC2475A [ AGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGNCAATCAAATGGGCAGGGCAGGTGGNCTGCC AAATTC AGCCAGGTTCATTTT GGNATC TGCTG AG NAT T GC TG AGAG TAAA CGCTG ATG TT AAA GGCTTTGGAT G ]
[+] EMBL AU065494 [ AGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCG CAATCAAATGGGCAAGGCAAGTGGCCTTGC AAA TT AGCCAGGTTCATTTT GG ATCTTGCTG A GGA T GC TG AGAG T AA ]
[+] EMBL AU101048 [ AGAGAGCTACCCTTCCCTTCCCTTCTCCTNCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAATT GCTTG AGAG T AACCGCTG ATG TTAAAA GGC TTGNAT GTCG GCAAACTCT ]
[+] EMBL AU063231 [ AGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCAT GGNAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGG CGTNACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTNGCCTCAA AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T NC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTG A CCA NG CCAGAAG CAGAG ACGCC GG CATACCGT ]
[+] EMBL OSR02071A [ AGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTNGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAN T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCC ]
[+] EMBL OSC13111 [ GAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCCAAAA TC AGCCAGGTTCATTTTGGG ATC TGCTG AAGGAA T GC TG AGAG T AA CGCTG ATG TTAAAA GGCTTTGGAT GTCG ]
[+] EMBL OSR0779A [ CCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGG CGT ACTGCACAAGTNAAGTCTCGGCAATCAAATGGGCAGGGCAGGTGGCCTTCC AAA TCAAGCC ]
[+] EMBL C98775 [ CATGGGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTC GGCC AAGGCCATGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCCGGGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGT ]
[+] EMBL AU031262 [ AACCCGACCANGTC GGCC AAGGCCATNGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGNGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGANGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGNGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCANCCTGACCACGTCGAGCTTATCTTGTCA ]
[+] EMBL AU164622 [ gGACCAAGTCGGGCCAAAGGCCATGGGNAAGGGATCTCAGGGGTCCACTTCAAGAACNCAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGNAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAAaaa ]
[+] EMBL CA766455 [ gacgagaCAAGGG GAGGGATCTCA GGGTCCACTTCAAGAACACAAGGGAGGCAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGCGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC TGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATATCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGNTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTG ]
[+] EMBL CB683313 [ GAACCCTTTGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCCGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CATAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATT ]
[+] EMBL AU065528 [ AAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTGGTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGAAGGTACTGTGGAGGCGTGGGCCGT ACTGCACAAGTGAAGTNTCGCCAATCAAATGGGCAGGGCAGGTGGCCTGCC AAA TC AGCCAGGTTCATTTT NG ATC TGCTG AA GAA T NC TG AGAG T AA CGCTG ATG TT A ]
[-] EMBL CF298414 [ TCATTTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAGAATGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGAAAAAGGTACCATTGTCTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTACAAAAGCGTCATCGTCAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTT]
[+] EMBL BI804985 [ TTT GG ATC TGCTG AA GAA T GC TG AGAG T AA CGCTG ATG TT AAA GGC TTGGAT GTCG ACAACCTCTTCGTTT CACACAT CCAGGTGAA CCACAGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAAGCTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACC TTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAAC ATTACTTGCC ACTTATCTGCC AAATTTTACTGCCTTAAAAA ]
[+] EMBL C98776 [ TTT GGNATC TGCTGAAA GAA TGGC TGAAGAG TAAA CGCTGAATGTTT AAA GGC TTGGAT NTCGNACAACCTCTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTACAAAAaa ]
[+] EMBL AU031261 [ GAA T GC TG AGAGNT AA CGCTG ATGNTTAAAA GGC TTGGATGGTCG ACAACCTCTTCGTTTNCACACATCCCAGGTGAACCCA AGCCCAGAAGCCAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGNAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAAaaaaaaaa ]
[+] EMBL BI806003 [ G T AA C CTG ATG TT AAA GGC TTGGAT GTCG NCAACCTTTTCGTTT CACACAT CCAGGTGAA CCA AGCCCAGAAG CAGAG ACGCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGA GCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGA GCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTAT GCACTTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCC ACTTATCTGCC AAATTTTACTGCCTTAAAAA ]
[+] EMBL AU161006 [ GCC GGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCG CCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGG ACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTG CTTACAAAAGCGTCA TCAAAAAAAAAAAAnt ]
[+] EMBL OSC02333 [ CATGGACGCATCAAACCTTACATGTCCTCACCCTG CCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTACAAAAa ]
[+] EMBL OSC127812 [ TCACCCTG CCACGTCGAGCTTATCTTGTCANAGAAGGAANAGGCCGTGAANAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAA CTTTAGTTCATTTTCTAGTACTTTGTTATGGCA TTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTANCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAATTTTACTGCCTTACAAAANCGTCA AAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_16052#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence
[TCGGCCAAGGCCATGGAAGGGTCTCAGGGTCCACTTCAAGAACCCAAGGAGNAGCGTTCGCTCTTCGCAAACTGCCTTGGTCAAGGCAAACCGGACNTTAAGGATGTNATTGCTCACAAGCAGNCAATTCCCTTCAGAAGGACTGTGAAGGCGTGGCCCGTANTTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGCAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAGTAACGCTGATGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAACCAAGCCCAGAAGCAGAGACGCCGGGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTTTAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAAAAAAAAAAAAAAAA]
[+] EMBL AU164518 [TCGGCCAAGGCCATGGAAGGGTCTCAGGGTCCACTTCAAGAACCCAAGGAGNAGCGTTCGCTCTTCGCAAACTGCCTTGGTCAAGGCAAACCGGACNTTAAGGATGTNATTGCTCACAAGCAGNCAATTCCCTTCAGAAGGACTGTGAAGGCGTGGCCCGTANTTGCACAAGTGAAGTCTCGCCAATCAAATGGGCAGGCAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAGTAACGCTGATGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAACCAAGCCCAGAAGCAGAGACGCCGGGACATACCGTGCTCATGGACGCATCAATCCTTACATGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTTTAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTAACAATTACTTGCCAACTTATCTGCCAAAAAAAAAAAAAAAAAA]
consensusID : consensus_16052#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 296 fasta sequence
[TCCTCACCNTGCNACGTCGAGCTTANCTTGCCAGAGNNGNAANAGNCCNTGAANAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTTTAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTANCCTTTCGTTTGTGTATGTTCAAATGGTNACAATTNCTTGCCAACTTATCTGCCNAAATTTTACTGCCTTAAAAAAAAAAAAAAAAA]
[+] EMBL OSC166615 [TCCTCACCNTGCNACGTCGAGCTTANCTTGCCAGAGNNGNAANAGNCCNTGAANAAAGAGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTTTAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATTGTTTAGTCGGAACTTGTTAAGTTTGATGCTANCCTTTCGTTTGTGTATGTTCAAATGGTNACAATTNCTTGCCAACTTATCTGCCNAAATTTTACTGCCTTAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16052#0 TCTTCCCTCCTCTTAGACCGCCGCCGCCACCGAGCCACTGCTTCTTCTGTGCGGAGAGAG 60
consensus_16052#1 ------------------------------------------------------------
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 AGAGAGAGAGAGAGCTACCCTTCCCTTCCCTTCTCCTCCTCCTGCTCCGCCGCCGCCATG 120
consensus_16052#1 ------------------------------------------------------------
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 GGCAAGTACTCGACGGAGCCGTCCAACCCGACCAAGTCGGCCAAGGCCATGGGGAGGGAT 180
consensus_16052#1 ------------------------------------TCGGCCAAGGCCATG--GAAGGGT 22
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 CTCAGGGTCCACTTCAAGAACACAAGGGAGACAGCGTTCGCTCTTCGCAAGCTGCCTTTG 240
consensus_16052#1 CTCAGGGTCCACTTCAAGAACCCAAGGAGNA--GCGTTCGCTCTTCGCAAACTGCCTT-G 79
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 GTCAAGGCAAAGCGGTACCTTGAGGATGTTATTGCTCACAAGCAGGCAATTCCCTTCAGA 300
consensus_16052#1 GTCAAGGCAAACCGG-ACNTTAAGGATGTNATTGCTCACAAGCAGNCAATTCCCTTCAGA 138
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 AGGTACTGTGGAGGCGTGGGCCGTACT-GCACAAGTGAAGTCTCGCCAATCAAATGGGCA 359
consensus_16052#1 AGG-ACTGTGAAGGCGTGGCCCGTANTTGCACAAGTGAAGTCTCGCCAATCAAATGGGCA 197
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 GGGCAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAG 419
consensus_16052#1 GG-CAGGTGGCCTGCCAAATCAGCCAGGTTCATTTTGGATCTGCTGAAGAATGCTGAGAG 256
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 TAACGCTGATGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAA 479
consensus_16052#1 TAACGCTGATGTTAAAGGCTTGGATGTCGACAACCTCTTCGTTTCACACATCCAGGTGAA 316
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 CCAAGCCCAGAAGCAGAGACGCCGG-ACATACCGTGCTCATGGACGCATCAATCCTTACA 538
consensus_16052#1 CCAAGCCCAGAAGCAGAGACGCCGGGACATACCGTGCTCATGGACGCATCAATCCTTACA 376
consensus_16052#2 ------------------------------------------------------------
consensus_16052#0 TGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAG 598
consensus_16052#1 TGTCCTCACCCTGCCACGTCGAGCTTATCTTGTCAGAGAAGGAAGAGGCCGTGAAGAAAG 436
consensus_16052#2 --TCCTCACCNTGCNACGTCGAGCTTANCTTGCCAGAGNNGNAANAGNCCNTGAANAAAG 58
******** *** ************ **** ***** * ** ** ** **** ****
consensus_16052#0 AGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTT 658
consensus_16052#1 AGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTT 496
consensus_16052#2 AGCCTGAAACCACCATCGCCCCGAGGAGGCAGTGAGCTTATCCGCCCAGAGTCGCAACTT 118
************************************************************
consensus_16052#0 TAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATT 718
consensus_16052#1 TAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATT 556
consensus_16052#2 TAGTTCATTTTCTAGTACTTTGTTATGGCATTGTGTGCTATTTATGTTTCTGGTACCATT 178
************************************************************
consensus_16052#0 GTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTA 778
consensus_16052#1 GTTTAGTCGGAACTTGTTAAGTTTGATGCTATCCTTTCGTTTGTGTATGTTCAAATGGTA 616
consensus_16052#2 GTTTAGTCGGAACTTGTTAAGTTTGATGCTANCCTTTCGTTTGTGTATGTTCAAATGGTN 238
******************************* ***************************
consensus_16052#0 ACAATTACTTGCCAACTTATCTGCCAAAATTTT--------ACTGCCTTACAAAAGCGTC 830
consensus_16052#1 ACAATTACTTGCCAACTTATCTGCCAAAA------------AAAAAAAAAAAAAA----- 659
consensus_16052#2 ACAATTNCTTGCCAACTTATCTGCCNAAATTTTACTGCCTTAAAAAAAAAAAAAAAAA-- 296
****** ****************** *** * * ****
consensus_16052#0 ATCAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTT 869
consensus_16052#1 ---------------------------------------
consensus_16052#2 ---------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||