These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 927 fasta sequence [CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG-AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC-GTGTTAC-TGTCAAGAAGAGCAAGAA-TATCC-TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA-TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG-AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC-TCGAAGCC-GGAGGCGTCGACAGCAGCCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTCGAG-CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA-CCGTGTCGAGGTC-CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC-GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT-CCGT-TTCCATT-CTACCTC-ATCTAGATGGGGGGTTTACATGT-GTTGAGATGTTTGCTTTGTCGTTTGT-GCGCACCAT-T-GTTATT-ATCATGAGCAGTCTTGGGAC-GAT-GTAAGGATAATCTATTGAATGTCTT-GAGTAAGATGGGGGCTTACTGCC-TTTTCCTGCAAAAAAAAAAAAAAAAAAAAGAAAAAA] [+] EMBL CF292883 [CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCA ] [+] EMBL CF317212 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGGNAGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAACCCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGC ] [+] EMBL CF296845 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAN AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGGAGCGTCGACAGCAGCCCAG ] [+] EMBL CF308156 [ TCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAANTATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTG AGNAGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCCGGGAGGCG ] [+] EMBL AK058906 [ CGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL CF293854 [ GGTTTTTTCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGATGAGGAGCTCCGCGCCCAGATCGGGGAGCAGAAGCTCAACGAGGGAGATTTTCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGGTGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTNTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGAC ] [+] EMBL OS2044A [ CCCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAANCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCCNGTGTTAC TGTCAAGAAGNGC ] [+] EMBL AU172974 [ CCTTGCTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAG ] [+] EMBL AU069043 [ CTCGTCTGCGCCGCCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCCTTTTTTGTCATCTCC AACCNGATGTCTTCAAGA ] [+] EMBL CA753515 [ TCTGCGCCGCCACCTCCTCCACCTCCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGAGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCGTCGACAGCAGGCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTTGAGCCCGAA GACATCNAGCTGGTGATGACCCANGCCA CCGTG ] [+] EMBL OSS4881A [ TCTGCGCCGNCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTACTTGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGTTGTCTTCAAGAGCCCTACATCCGACACCTATTGTNATTTTTTGCGAGGCCAAGATCGAGGn ] [+] EMBL AB110178 [ TCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL BP184579 [ TCCCAACCATGACGGCGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL BP184894 [ acgaGGCCGAGATCGGGAAGCAGGAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL CA999966 [ CAACGAGGGAGATGAGCCAGTCGTTGTTGAAGACTTCGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAT AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL CA999730 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTG ] [+] EMBL CB000690 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL CA999121 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACATCCGACACCTA TGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAGACCCAGGCTGCAG AGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCG ] [+] EMBL CA999658 [ AACGAGGGAGATGAGCCAGTCGTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGATGATGCGG AGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGCAGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCC GTGTTAC TGTCAAGAAGAGCAAGAA TATCC TTTTTGTCA ] [+] EMBL BI801588 [ GCAGA CCAGGCTCCAG A CAGTTCAA GCCCCGGATCTGA CAGCATGCTCTTCGAA CC GGAGGCGTCGACA CAGCCCAGGAAGATGATGA GCCGTCGACGAGACTGGTGTTGA CCGAAGGACATCGA CTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAA GCGGTGAA GCACTCAAGGCT CCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTACCTC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTCTGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATTATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAAAAAGAAAAAA] [-] EMBL CF293853 [ gtTGCAG AGCAGTTCAAGGCGCCGGATTTGAGCAGCATGCTT TCGAAGCC GGAGGCGTCGACAGCAGCCCAGGAAGATGATGAGCCCGTCGACGAGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCC CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTCCCTC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTTTGT GCGCCCCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGAT GGGGCTTACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAA ] [-] EMBL CF292884 [ TCAAGGCGCCGGATCTGAGCAGCATGCTC TCGAAGCC GGAGGCGTCGACAGCAGCCCAGGAAGATGGTGAGGCCGTCGACGAGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCAAATGATT CCGT TTCCATT AAAAATC ATCTAGATGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTAAGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTAACTGCC TTTTCCTGCAAAAAAAAAAAAAAAAAAcactg ] [-] EMBL CF296846 [ AGACTGGTGTCGAG CCGAAGGACATCGAGCTGGTGATGACCCAGGCCA CCGTGTCGAGGTC CAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGC GACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATT CCGT TTCCATT CTACCTC ATCTAGACGGGGGGTTTACATGT GTTGAGATGTTTGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAA ] [+] EMBL BI805904 [ TGACCCAGGCCACCCGTGTCGAGGTCACAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCTGATATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTGCCGTGTTCCNTTGCTACCTCTATCTAGATGGGGGGTTTACATGTGGTTGAGATGTTTGCTTTGTCGTTTGTGGCGCACCATGTGGTTATTGATCATGANCAGTCTTGGGACAGATGGTAAGGATAATCTATTGAATGTCTTGGAGTAAGATGGGGGCTTACTNCCATTTTCCTGCCAAAAAAAAAA ] [+] EMBL AU197594 [ TGCTTTGTCGTTTGT GCGCACCAT T GTTATT ATCATGAGCAGTCTTGGGAC GAT GTAAGGATAATCTATTGAATGTCTT GAGTAAGATGGGGGCTTACTGCC TTTTCCTGCAAAAAAA ] consensusID : consensus_16137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 530 fasta sequence [AGCCCAAGATCGAGACCTGAGCTCCAGCTGCAGACCCAGGCTCCAGACAGTTCAAGGCGCCGGA-TCTGA--CAGCA-TGCTCTCGAAGCCGGAGGCGTCGACA-CAGCCCAGGAAG-ATGATGAGCCCGTCGACGAGA-CTGGTGTTGAGCCGAAGGACATCGAG-CTGGTGATGA-CCCAGGCCA-CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA-TTCTACCT-ATCTAGATGGGGGGTTTACA-TGTGTTG-AGATGTCTGCTTTG-TCGTTTGTGCGCACCA-TTGTTATTATTATGAG-CAGTCTTGGGA-CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA-TAGT-GAAGTGAATATACCTGACACCCAAAAATTCGGCAAAAAAAAAA] [+] EMBL BI803916 [AGCCCAAGATCGAGACCTGAGCTCCAGCTGCAGACCCAGGCTCCAGACAGTTCAAGGCGCCGGA TCTGA CAGCA TGCTCTCGAAGCCGGAGGCGTCGACA CAGCCCAGGAAG ATGATGAGCCCGTCGACGAGA CTGGTGTTGAGCCGAAGGACATCGAG CTGGTGATGA CCCAGGCCA CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA TTCTACCT ATCTAGATGGGGGGTTTACA TGTGTTG AGATGTCTGCTTTG TCGTTTGTGCGCACCA TTGTTATTATTATGAG CAGTCTTGGGA CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA TAGT GAAGTGAATATACCTGACACCCAAAAA ] [+] EMBL BI803031 [ cCCGGATTCTGACCCAGCAGTGCTCTCGAACCCGGAGGCGTCGACAGCAGCCCAGGAAGTATGATGAGCCCGTCGACGAGA CTGGTGTTGAGCCGAAGGACATCGAG CTGGTGATGA CCCAGGCCA CCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCA TTCTACCTCATCTAGATGGGGGGTTTACA TGTGTTG AGATGTCTGCTTTC TCGTTTGTGCGCACCA TTGTTATTATTATGA CAGTCTTGGGA CGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACCATGTCAGTTGGCTTGAAATGCTTGACCCCTCGAAGTGAATATACCTGACACCAAAAA ] [+] EMBL BI799957 [ CGAGACCTGGTGTTGAGCCGAAGGACATCGAGCCTGGTGATGACCCCAGGCCACCCGTGTCGAGGTCCAAGGCGGTGAAGGCACTCAAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCGCGTTCGATCATTTGATTCCGTTTCCACTTCTACCT CACTAGATGGGGGGTTTACACTGTGTTGAAGATGTCTGCTTTGCTCGTTTGTGCGCACCACTTGTTATTATTATGAGCCAGTCTTGGGACCGATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGCACTTGGACAATGTCAGTTGGCTTGAAATGCTTGA TAGT GAAGTGAATATACCTGACACCCCAACTTTCGGCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16137#0 CTGAAGGAGTAAAAAACTCCATTCGCTGCTCTAGGGTTTTTCCCTTGCTCGTCTGCGCCG 60 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 CCACCTCCTCCACCTTCTCTTCCCCTCCCAACCATGACGGCGGCCGAGATCGGGAAGCAG 120 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 GAGGAGGAGCTCCGCGCCCAGATCGAGGAGCAGAAGCTCAACGAGGGAGATGAGCCAGTC 180 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 GTTGTTGAAGATGACGATGACGATGAAGATGATGACGACGAGGATGACAAAGATGACGAT 240 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 GATGCGGAGGGAGGTGATGCAAGTGGAAGATCTAAGCAGAGTCGTAGTGAGAAAAAAAGC 300 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 AGGAAGGCCATGGTGAAGCTTGGCATGAAGTCTATCACTGGTGTGAGCCGTGTTACTGTC 360 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 AAGAAGAGCAAGAATATCCTTTTTGTCATCTCCAAACCGGATGTCTTCAAGAGCCCTACA 420 consensus_16137#1 ------------------------------------------------------------ consensus_16137#0 TCCGACACCTATGTCATTTTTGGCGAGGCCAAGATCGAGGACCTGAGCTCGCAGCTGCAG 480 consensus_16137#1 -------------------------AGCCCAAGATCGAG-ACCTGAGCTC-CAGCTGCAG 33 ** *********** ********** ********* consensus_16137#0 ACCCAGGCTGCAGAGCAGTTCAAGGCGCCGGATCTGAGCAGCATGCTCTCGAAGCCGGAG 540 consensus_16137#1 ACCCAGGCTCCAGA-CAGTTCAAGGCGCCGGATCTGA-CAGCATGCTCTCGAAGCCGGAG 91 ********* **** ********************** ********************** consensus_16137#0 GCGTCGACAGCAGCCCAGGAAGATGATGAGGCCGTCGACGAGACTGGTGTCGAGCCGAAG 600 consensus_16137#1 GCGTCGACA-CAGCCCAGGAAGATGATGAGCCCGTCGACGAGACTGGTGTTGAGCCGAAG 150 ********* ******************** ******************* ********* consensus_16137#0 GACATCGAGCTGGTGATGACCCAGGCCACCGTGTCGAGGTCCAAGGCGGTGAAGGCACTC 660 consensus_16137#1 GACATCGAGCTGGTGATGACCCAGGCCACCGTGTCGAGGTCCAAGGCGGTGAAGGCACTC 210 ************************************************************ consensus_16137#0 AAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCG 720 consensus_16137#1 AAGGCTGCCAATGGCGACATCGTCACAGCCATCATGGAACTCACAACTTAGCGAGATTCG 270 ************************************************************ consensus_16137#0 CGTTCGATCATTTGATTCCGTTTCCATTCTACCTCATCTAGATGGGGGGTTTACATGTGT 780 consensus_16137#1 CGTTCGATCATTTGATTCCGTTTCCATTCTACCT-ATCTAGATGGGGGGTTTACATGTGT 329 ********************************** ************************* consensus_16137#0 TGAGATGTTTGCTTTGTCGTTTGTGCGCACCATTGTTATTATCATGAGCAGTCTTGGGAC 840 consensus_16137#1 TGAGATGTCTGCTTTGTCGTTTGTGCGCACCATTGTTATTATTATGAGCAGTCTTGGGAC 389 ******** ********************************* ***************** consensus_16137#0 GATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGC 900 consensus_16137#1 GATGTAAGGATAATCTATTGAATGTCTTGAGTAAGATGGGGGCTTACTGCCTTTTCCTGC 449 ************************************************************ consensus_16137#0 AAAAAAAAAAAAAAAAAAAAGAAAAAA--------------------------------- 927 consensus_16137#1 ACTTGGACAATGTCAGTTGGCTTGAAATGCTTGATAGTGAAGTGAATATACCTGACACCC 509 * * ** * *** consensus_16137#0 --------------------- consensus_16137#1 AAAAATTCGGCAAAAAAAAAA 530 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||