cluster # 1617

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Oryza sativa
cluster # 1617 cluster # 1617 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1617#0 length = 1471 sequences # 2
consensusID : consensus_1617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1471
fasta sequence
                              [GCTCCAAACCTCCAAACCGATCGATTCCTCGTTCGATCTCCACCGCCGCGGAGAGGCGCGGCGCGGCGTGGGTGGGTGTGTGTGGCCGCCTTAAACCCTAAACCCTCTCAACCATGAATCCCCACGGCGGTGGGAACCAAATGCGCGAGCCGGCGCTCCCGGCGGCGGTCGGCGCGGAGCTGGAGCGGCTGGAGGCGAGGCTGGGCCAGCTCGCCTGCGCGGAGGCGCGGCGGCAGCTCGCGGAGCTCGGCGAGCCGGCGGCGGCGCGGGTGCTCCGGGCGATTGGGGAGGCGCGCCAGGTCCGTACGCTCTCCGGCTTCATCAGGCACATGGCGAACCAGGAGAGGATGAAGCGCAACGCGCGGGGCATCCCCACCGCCCACAGCGCCGCATGCATCTCCGGCCCCTGCCGCGAAGAGGAATCTATATCCACTCCACTGTACTACAATGAGGTTCAAATGGATGCTCAAACACCCAACGACATGGTGGAGGTTGGGAGTCCCAACCAACAGATGCCGCTCCGTTTGCATGACAATGGCGGTTCTGTCGGACATATTGCTCGTGTGGTTCCGGACCTTGCTAACCCAGCAGTTGGGAGCCCATATGGTCGAATATCTTCTGTGCTGCTGCAGAACCAGAACTGCGTTGAAGGTTATACGCCTTCCCGTGGAATGGTTTCTCCTGCGTCCAACCAGGTTGGTAGCCCTGGCCACCGCATGCCATCTGGGCTGCAGAGACATATGGAGATTGACAGCCCCATCCAGCCGATCGTTTCTACTCCAGAAAGAGTTTCCACCCCGAGCCCTGTGCGGGATCTATCAAGATGTGTCGAGAATATGGCTGGCCCCTCAGGAAGTCCTCCATGTCCCATTTGGGTGATGCCGCAAATTCCTCCAGCAATCTGTCCTGACACGACCAATGTGTTGAGGGAGGTAGTGAGCCCTCAGATGCTAGCGCTGGGAGAGTTGGAGTTCAGGAAGATATTTATGATTTTTGCTTATCTTTCCTGGAATAAGAAAGGAGTAAAGCCTCCATTATCTACACCAAAAAGTAGTAAGATAGAAGATGTCCTCTCCGTGGACAGTATCAGATCCTTGAAGTCAATGTCCATGGCTCAATTTGAGTCACGAATCTGGAGCACATTTGGTCACGATAATATATCATCTTCAGATAGAGCAAAGAACCTTGATTCTGGTCCAGGTATGTCAAAAGTCTACCATTGTAATGTTGAGATAAGAGGGGGTACAGTTGTCAAAATTTTCAAGGGACCATATATTGAGAATAGGAGGACTCATCTTCAGAAAGTTCTTGGTGATGATAACGTCCTTGTAGTAAAATTTATGGAGATATCTTCAGACACTGAGACTGATTTGTCTACCTATTTGGAACACTACCATAAGGTTGCTGAAGAGGGTATTGTTTTGGGTTTGCGCTGCTATCGATTTTTCCTTTACAAGGACGGCGGGAAAGA]

[+] EMBL AK119908             [GCTCCAAACCTCCAAACCGATCGATTCCTCGTTCGATCTCCACCGCCGCGGAGAGGCGCGGCGCGGCGTGGGTGGGTGTGTGTGGCCGCCTTAAACCCTAAACCCTCTCAACCATGAATCCCCACGGCGGTGGGAACCAAATGCGCGAGCCGGCGCTCCCGGCGGCGGTCGGCGCGGAGCTGGAGCGGCTGGAGGCGAGGCTGGGCCAGCTCGCCTGCGCGGAGGCGCGGCGGCAGCTCGCGGAGCTCGGCGAGCCGGCGGCGGCGCGGGTGCTCCGGGCGATTGGGGAGGCGCGCCAGGTCCGTACGCTCTCCGGCTTCATCAGGCACATGGCGAACCAGGAGAGGATGAAGCGCAACGCGCGGGGCATCCCCACCGCCCACAGCGCCGCATGCATCTCCGGCCCCTGCCGCGAAGAGGAATCTATATCCACTCCACTGTACTACAATGAGGTTCAAATGGATGCTCAAACACCCAACGACATGGTGGAGGTTGGGAGTCCCAACCAACAGATGCCGCTCCGTTTGCATGACAATGGCGGTTCTGTCGGACATATTGCTCGTGTGGTTCCGGACCTTGCTAACCCAGCAGTTGGGAGCCCATATGGTCGAATATCTTCTGTGCTGCTGCAGAACCAGAACTGCGTTGAAGGTTATACGCCTTCCCGTGGAATGGTTTCTCCTGCGTCCAACCAGGTTGGTAGCCCTGGCCACCGCATGCCATCTGGGCTGCAGAGACATATGGAGATTGACAGCCCCATCCAGCCGATCGTTTCTACTCCAGAAAGAGTTTCCACCCCGAGCCCTGTGCGGGATCTATCAAGATGTGTCGAGAATATGGCTGGCCCCTCAGGAAGTCCTCCATGTCCCATTTGGGTGATGCCGCAAATTCCTCCAGCAATCTGTCCTGACACGACCAATGTGTTGAGGGAGGTAGTGAGCCCTCAGATGCTAGCGCTGGGAGAGTTGGAGTTCAGGAAGATATTTATGATTTTTGCTTATCTTTCCTGGAATAAGAAAGGAGTAAAGCCTCCATTATCTACACCAAAAAGTAGTAAGATAGAAGATGTCCTCTCCGTGGACAGTATCAGATCCTTGAAGTCAATGTCCATGGCTCAATTTGAGTCACGAATCTGGAGCACATTTGGTCACGATAATATATCATCTTCAGATAGAGCAAAGAACCTTGATTCTGGTCCAGGTATGTCAAAAGTCTACCATTGTAATGTTGAGATAAGAGGGGGTACAGTTGTCAAAATTTTCAAGGGACCATATATTGAGAATAGGAGGACTCATCTTCAGAAAGTTCTTGGTGATGATAACGTCCTTGTAGTAAAATTTATGGAGATATCTTCAGACACTGAGACTGATTTGTCTACCTATTTGGAACACTACCATAAGGTTGCTGAAGAGGGTATTGTTTTGGGTTTGCGCTGCTATCGATTTTTCCTTTACAAGGACGGCGGGAAAGA]
[+] EMBL AU173868             [                     CGATTCCTCGTTCGATCTCCACCGCCGCGGAGAGGCGCGGCGCGGCGTGGGTGGGTGTGTGTGGCCGCCTTAAACCCTAAACCCTCTCAACCATGAATCCCCACGGCGGTGGGAACCAAATGCGCGAGCCGGCGCTCCCGGCGGCGGTCGGCGCGGAGCTGGAGCGGCTGGAGGCGAGGCTGGGCCAGCTCGCCTGCGCGGAGGCGCGGCGGCAGCTCGCGGAGCTCGGCGAGCCGGCGGCGGCGCGGGTGCTCCGGGCGATTGGGGAGGCGCGCCAGGTCCGTACGCTCTCCGGCTTCATCAGGCACATGGCGAACCAGGAGAGGATGAAGCGCAACGCGCGGGGCATCCCCACCGCCCACAGCGCCGCATGCATCTCCGGCCCCTGCCGCGAAGAGGAATCTATATCCACTCCACTGTACTACAATGAGGTTCAAATGGATGCTCAAACACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_1617#0
GCTCCAAACCTCCAAACCGATCGATTCCTCGTTCGATCTCCACCGCCGCGGAGAGGCGCG
GCGCGGCGTGGGTGGGTGTGTGTGGCCGCCTTAAACCCTAAACCCTCTCAACCATGAATC
CCCACGGCGGTGGGAACCAAATGCGCGAGCCGGCGCTCCCGGCGGCGGTCGGCGCGGAGC
TGGAGCGGCTGGAGGCGAGGCTGGGCCAGCTCGCCTGCGCGGAGGCGCGGCGGCAGCTCG
CGGAGCTCGGCGAGCCGGCGGCGGCGCGGGTGCTCCGGGCGATTGGGGAGGCGCGCCAGG
TCCGTACGCTCTCCGGCTTCATCAGGCACATGGCGAACCAGGAGAGGATGAAGCGCAACG
CGCGGGGCATCCCCACCGCCCACAGCGCCGCATGCATCTCCGGCCCCTGCCGCGAAGAGG
AATCTATATCCACTCCACTGTACTACAATGAGGTTCAAATGGATGCTCAAACACCCAACG
ACATGGTGGAGGTTGGGAGTCCCAACCAACAGATGCCGCTCCGTTTGCATGACAATGGCG
GTTCTGTCGGACATATTGCTCGTGTGGTTCCGGACCTTGCTAACCCAGCAGTTGGGAGCC
CATATGGTCGAATATCTTCTGTGCTGCTGCAGAACCAGAACTGCGTTGAAGGTTATACGC
CTTCCCGTGGAATGGTTTCTCCTGCGTCCAACCAGGTTGGTAGCCCTGGCCACCGCATGC
CATCTGGGCTGCAGAGACATATGGAGATTGACAGCCCCATCCAGCCGATCGTTTCTACTC
CAGAAAGAGTTTCCACCCCGAGCCCTGTGCGGGATCTATCAAGATGTGTCGAGAATATGG
CTGGCCCCTCAGGAAGTCCTCCATGTCCCATTTGGGTGATGCCGCAAATTCCTCCAGCAA
TCTGTCCTGACACGACCAATGTGTTGAGGGAGGTAGTGAGCCCTCAGATGCTAGCGCTGG
GAGAGTTGGAGTTCAGGAAGATATTTATGATTTTTGCTTATCTTTCCTGGAATAAGAAAG
GAGTAAAGCCTCCATTATCTACACCAAAAAGTAGTAAGATAGAAGATGTCCTCTCCGTGG
ACAGTATCAGATCCTTGAAGTCAATGTCCATGGCTCAATTTGAGTCACGAATCTGGAGCA
CATTTGGTCACGATAATATATCATCTTCAGATAGAGCAAAGAACCTTGATTCTGGTCCAG
GTATGTCAAAAGTCTACCATTGTAATGTTGAGATAAGAGGGGGTACAGTTGTCAAAATTT
TCAAGGGACCATATATTGAGAATAGGAGGACTCATCTTCAGAAAGTTCTTGGTGATGATA
ACGTCCTTGTAGTAAAATTTATGGAGATATCTTCAGACACTGAGACTGATTTGTCTACCT
ATTTGGAACACTACCATAAGGTTGCTGAAGAGGGTATTGTTTTGGGTTTGCGCTGCTATC
GATTTTTCCTTTACAAGGACGGCGGGAAAGA
clustalw multiple alignements is not computed in this case