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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16178#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2111 fasta sequence
[AGAAAAGTCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGGTGGACATCACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGCCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGATTTACTATACTTGATTCCGTACAACCGCTCATGGATAAAGAGCCAACCATGGAGGATTTGCCTTCAACGCTGGGGCAGCCTTCTACTTCTGCATCATCGGTTGATGCTAGATATTCAGCCGACAGGACTGAAGATTCACAGCTCTTCCTCTCCGTCCCAGCTTTAAACCAAGCTGCGTCTTATCTGGCCCAGACGGCCTCATATCTTACCCAGTGCCTCCCTGTATCTGGTTACACAGCTATTTCTGAGGAAGGGCAAGAACTAGCAACTCTGCCACCTGCGTCAACTGTTGGTGGATCCTCTTTTCAGGCTTCTTCCGAACAGTCAGCAGACTCATCTCCTGGTGAAATTGATAATACTGGAAGCTCATCTCAAGAAATCACAGAACAGATGGCACCTTTGCGCGTCTTCCAGAATGGGGCTTCACTGTTTCAAGGTCTTGTAGAACGTGCTCGGAAAACTGTTCGTGGCTCAGCCAATGATATTGGATGGCTTCAGCAGGATCAAAGCTTACCTCCAACTGAGGACGGAACTGCCAGATTCTTGGAAATTCTTGATGCTGTGAGAAAAAACGAACACAAGCTGCCTGATTCGATGGTCTATCTGTTGGTTCCAGGTTTGTTTAGTAACCATGGGCCTCTTTACTTTGTCAAGACAAAATCATATTTCTCCAAGATGGGTCTGGCTTGTCACATTGCCAAGATTCACAGTGAGTCTTCAGTAAGTAAAAATGCAAGGGAGATAAAGGAATATATAGAAGAAATATACTGGGGATCGAAGAAGCGGGTGCTACTTCTCGGCCATAGCAAGGGTGGTGTA-GATGCAGCAGCAGCCCTCTCCCTTTAC-TGGCCACAAC-TGAAAGACAAGGTCGCAGGTTTGGCTTTAGCTCAAAGCCCATATGGAGGAAGCCCGGTTGCTTCAGATATCTTGCGAGAAGGCCAGCTTGGTGACTATGTCAGGTTACGTAAACTCATGGAGATTTTGGTATCAAAAGTCCTTAAGGGTGATCTTCAGGCTCTGGAAGACCTGACATATGAGAGGAGGAAAGAATTCCTGCGGCAGAACCCATTGCCTCCTGAGGTTCCCATT-GTCT-CGTTCCACACAGAGGC-TAGCATCACTCCCAGTGTGCTTACAGCCCTCTCTCATGTTGCACACTTGGAGCTCCCA-GCT-GCAGCTGATGGGAATCCTACTAGGATCCCA-GTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTATG-GTGAGAAGAGTGATGGTC-TTGTGACAAGGAAG-GATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAG-AGCGGAAG-TTGG-ACCAT-GCAT-GGATGGTTTATTCCTCACTCAATGAGG-AACCTAGGGATCAGGCAGACACATCGCAGG-TATG-TGAA-GCCCTGCTGACTCTGCTTGTTGAGGTTGCGCAGAAA-CGGAGGCAT-GAGATG-GCTATGAAAGATGAATAAAAATGTTAGTGTTGCTCTGACAGATATTTGTAATCGTAGACTTCTGTTGTTGAATGTACTGTCCA-AACTTATGCTGAAACTGCTTCTGGGCCACTTTTTTTTGTTTGG-TTTACAGAAGCTTCATATA-TCAACTGAATCTGAAAGGTGAAAAGGGCAACAATGGAAGCGTTTCTCTTTTTTTTTTTAATTTACCATAAGGAAATTGTATGATTTGGTCGTTTCTCATGTCTCATGGTATTCCCCTTCCCAATCAGGTGATTCGTCTACTAGGTCTGAATTTGATTATGGTTGTAAGTGTATTTAGGCATGATTCCATGAGTCATGGGTATGCAACAGCTTGAGATCGCAATGTATAGAACTCTTTATATCCTAGTCTGTTG]
[+] EMBL AK067362 [AGAAAAGTCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGGTGGACATCACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGCCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGATTTACTATACTTGATTCCGTACAACCGCTCATGGATAAAGAGCCAACCATGGAGGATTTGCCTTCAACGCTGGGGCAGCCTTCTACTTCTGCATCATCGGTTGATGCTAGATATTCAGCCGACAGGACTGAAGATTCACAGCTCTTCCTCTCCGTCCCAGCTTTAAACCAAGCTGCGTCTTATCTGGCCCAGACGGCCTCATATCTTACCCAGTGCCTCCCTGTATCTGGTTACACAGCTATTTCTGAGGAAGGGCAAGAACTAGCAACTCTGCCACCTGCGTCAACTGTTGGTGGATCCTCTTTTCAGGCTTCTTCCGAACAGTCAGCAGACTCATCTCCTGGTGAAATTGATAATACTGGAAGCTCATCTCAAGAAATCACAGAACAGATGGCACCTTTGCGCGTCTTCCAGAATGGGGCTTCACTGTTTCAAGGTCTTGTAGAACGTGCTCGGAAAACTGTTCGTGGCTCAGCCAATGATATTGGATGGCTTCAGCAGGATCAAAGCTTACCTCCAACTGAGGACGGAACTGCCAGATTCTTGGAAATTCTTGATGCTGTGAGAAAAAACGAACACAAGCTGCCTGATTCGATGGTCTATCTGTTGGTTCCAGGTTTGTTTAGTAACCATGGGCCTCTTTACTTTGTCAAGACAAAATCATATTTCTCCAAGATGGGTCTGGCTTGTCACATTGCCAAGATTCACAGTGAGTCTTCAGTAAGTAAAAATGCAAGGGAGATAAAGGAATATATAGAAGAAATATACTGGGGATCGAAGAAGCGGGTGCTACTTCTCGGCCATAGCAAGGGTGGTGTA GATGCAGCAGCAGCCCTCTCCCTTTAC TGGCCACAAC TGAAAGACAAGGTCGCAGGTTTGGCTTTAGCTCAAAGCCCATATGGAGGAAGCCCGGTTGCTTCAGATATCTTGCGAGAAGGCCAGCTTGGTGACTATGTCAGGTTACGTAAACTCATGGAGATTTTGGTATCAAAAGTCCTTAAGGGTGATCTTCAGGCTCTGGAAGACCTGACATATGAGAGGAGGAAAGAATTCCTGCGGCAGAACCCATTGCCTCCTGAGGTTCCCATT GTCT CGTTCCACACAGAGGC TAGCATCACTCCCAGTGTGCTTACAGCCCTCTCTCATGTTGCACACTTGGAGCTCCCA GCT GCAGCTGATGGGAATCCTACTAGGATCCCA GTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTATG GTGAGAAGAGTGATGGTC TTGTGACAAGGAAG GATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAG AGCGGAAG TTGG ACCAT GCAT GGATGGTTTATTCCTCACTCAATGAGG AACCTAGGGATCAGGCAGACACATCGCAGG TATG TGAA GCCCTGCTGACTCTGCTTGTTGAGGTTGCGCAGAAA CGGAGGCAT GAGATG GCTATGAAAGATGAATAAAAATGTTAGTGTTGCTCTGACAGATATTTGTAATCGTAGACTTCTGTTGTTGAATGTACTGTCCA AACTTATGCTGAAACTGCTTCTGGGCCACTTTTTTTTGTTTGG TTTACAGAAGCTTCATATA TCAACTGAATCTGAAAGGTGAAAAGGGCAACAATGGAAGCGTTTCTCTTTTTTTTTTTAATTTACCATAAGGAAATTGTATGATTTGGTCGTTTCTCATGTCTCATGGTATTCCCCTTCCCAATCAGGTGATTCGTCTACTAGGTCTGAATTTGATTATGGTTGTAAGTGTATTTAGGCATGATTCCATGAGTCATGGGTATGCAACAGCTTGAGATCGCAATGTATAGAACTCTTTATATCCTAGTCTGTTG]
[+] EMBL CB655232 [ GGACCTCTCAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGCCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGATTTACTATACTTGATTCCGTACAACCGCTCATGGATAAAGAGCCAACCATGGAGGATTTGCCTTCAACGCTGGGGCAGCCTTCTACTTCTGCATCATCGGTTGATGCTAGATATTCAGCCGACAGGACTGAAGATTCACAGCTCTTCCTCTCCGTCCCAGCTTTAAACCAAGCTGCGTCTTATCTGGCCCAGACGGCCTCATATCTTACCCAGTGCCTCCCTGTATCTGGTTACACAGCTATTTCTGAGGAAGGGCAAGAACTAGCAACTCTGCCACCTGCGTCAACTGTTGGTGGATCCTCTTTTCAGGCTTCTTCCGAACAGTCAGCAGACTCATCTCCTGGTGAAATTGATAATACTGGAAGCTCATCTCAAGAAATCACAGAACAGATGGCACCTTTGCGCGTCTTCCAGAATGGGGCTTCACTGTTTCAAGGTCTTGTAGAACGTGCTCGGAAAACTGTTCGTGGCTCACCCAAT ]
[+] EMBL C28543 [ TGATGCTGTGAGAAAAAACGAACACAAGCTGCCTGATTCGATGGTCTATCTGTTGGTTCCAGGTTTGTTTAGTAACCATGGGCCTCTTTACTTTGTCAAGACAAAATCATATTTCTCCAAGATGGGTCTGGCTTGTCACATTGCCAAGATTCACAGTGAGTCTTCAGTAAGTAAAAATGCAAGGGAGATAAAGGAATATATAGAAGAAATATACTGGGGATCGAGGAAGCGGGTGCTACTTCTCGGCCATAGCAAGGGTGGTGTAGGATGCAGCAGCAGCCCTCTNCCTTTACTTGGCCACAACTTGAAAGACAAGG ]
[+] EMBL CA765748 [ GTCTGGCTTGTCACATTGCCAAGATTCACAGTGAGTCTTCAGTAAGTAAAAATGCAAGGGAGATAAAGGAATATATAGAAGAAATATACTGGGGATCGAAGAAGCGGGTGCTACTTCTCGGCCATAGCAAGGGTGGTGTA GATGCAGCAGCAGCCCTCTCCCTTTAC TGGCCACAAC TGAAAGACAAGGTCGCAGGTTTGGCTTTAGCTCAAAGCCCATATGGAGGAAGCCCGGTTGCTTCAGATATCTTGCGAGAAGGCCAGCTTGGTGACTATGTCAGGTTACGTAAACTCATGGAGATTTTGGTATCAAAAGTCCTTAAGGGTGATCTTCAGGCTCTGGAAGACCTGACATATGAGAGGAGGAAAGAATTCCTGCGGCAGAACCCATTGCCTCCTGAGGTTCCCATT GTCT CGTTCCACACAGAGGC TAGCATCACTCCCAGTGTGCTTACAGCCCTCTCTCATGTTGCACACTTGGAGCTCCCA GCT GCAGCTGATGGGAATCCTACTAGGATCCCA GTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTATG GTGAGAAGAGTGATGGTC TTGTGACAAGGAAG GATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAG AGCGGAAG TTGG ACCAT GCATGGGATGGGTTATTCCTCACTCAATGAGG AACCTAGGGATCAGGCAGACACATCGCANG TATG TGAA GCCCTGCTGACTCTGCTTGNTGAGGTTGCGCAGAAA CGGAGGCAT GA ]
[-] EMBL CB655233 [ ATCAAAAGTCCTTAAGGGTGATCTTCAGGCTCTGGAAGACCTGACATATGAGAGGAGGAAAGAATTCCTGCGGCAGAACCCATTGCCTCCTGAGGTTCCCATT GTCT CGTTCCACACAGAGGC TAGCATCACTCCCAGTGTGCTTACAGCCCTCTCTCATGTTGCACACTTGGAGCTCCCA GCT GCAGCTGATGGGAATCCTACTAGGATCCCA GTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTATG GTGAGAAGAGTGATGGTC TTGTGACAAGGAAG GATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAG AGCGGAAG TTGG ACCAT GCAT GGATGGTTTATTCCTCACTCAATGAGG AACCTAGGGATCAGGCAGACACATCGCAGG TATG TGAA GCCCTGCTGACTCTGCTTGTTGAGGTTGCGCAGAAA CGGAGGCAT GAGATG GCTATGAAAGATGAATAAAAATGTTAGTGTTGCTCTGACAGATATTTGTAATCGTAGACTTCTGTTGTTGAATGTACTGTCCA AACTTATGCTGAAACTGCTTCTGGGCCACTTTTTTTTGTTTGG TTTACAGAAGCTTCATATA TCAACTGAATCTGAAAGGTGAAAAGGGCAACAATGGAAGCGTTTCTCTTTTTTTTAAAGATTTACCATAAGGAAATTGTATGATTT ]
[+] EMBL BI803752 [ aGTTCCCATTGGTGTGCGGTCCACACAGAGGCGTAGCATCACTCCCAGTGGGCTTACAGCCCTCTCTCATGTTGCACACTTGGAGCTCCCACGCTGGCAGCTGATGGGAATCCTACTAGGATCCCACGTTGTAATGCCCCTTTCAGCTCCAAT GCACCATGCTCACAACTTCTGGTGCCAAGTTATGTGTGAGAAGAGTGATGGTCATTGTGACAAGGAAGCGATGCTGAAGTTCCTGGATCAGTAGTGGTCCGCCCAGTAGCGGAAGCTTGGCACCATCGCAT GGATGGTTTATTCCTCACTCAATGAGGCAACCTAGGGATCAGGCAGACACATCGCAGGCTATGCTGAATGCCCTGCTGACTCTGCTTGTTGAGGTTGCGCAGAAACCGGAGGCATCGAGATGCGCTATGAAAGATGAATAAAAATGTTAGTGTTGCTCTGACAGATATTTGTAATCGTAGACTTCTGTTGTTGAATGTACTGTCCC AACTTATCCTGAACCTGCTTCTGGCCCACTTTTTTTTGTTTGGCTTTACAGAAGCTTCATATACTCAACTGAATCTGAAAGGTGTAAAaaaaaaa ]
[+] EMBL BI804235 [ GAGCTCCCA GCT GCAGCTGATGGGAATCCTACTAGGATCCCACGTTGTAATGCCACTTTCAGCTCCAATGCCAGCATGCTCACAACTTCTGGTGGCAAGGTATG GTGAGAAGAGTGAT GTC TTGTGACAAGGAAG GATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAG AGCGGAAG TTGG ACCAT GCAT GGATGGTTTATTCCTCACTCAATGAGG AACCTAGGGATCAGGCAGACACATCGCAGG TATG TGAA GCCCTGCTGACTCTGCTTGTTGAGGTTGCGCAGAAA CGGAGGCAT GAGATG GCTATGAAAGATGAATAAAAATGTTAGTGTTGCTCTGACAGATATTTGTAATCGTAGACTTCTGTTGTTGAATGTACTGTCCACAACTTATGCTGAAACTGCTTCTGGGCCACTTTTTTTTGTTTGG TTTACAGAAGCTTCATATA TCAACTGAATCTGAAAGGTGAAAAGGGCAAAAAaaaaa ]
consensusID : consensus_16178#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1660 fasta sequence
[CCCACTGTAATCTGATTGATGTGTGTTTACTATGGTATATTCTTCTGTGGGGATATTTTCTGAACATTCTCTTTTTTACATCAGATTACAAGTGGACAATGACGATGATGTATGTTATGATGATGACGATCCTTATGGTACAGATGATTCAAATGGTAATTGTACAACCATCCACCTGCTTCCATGGTGAACCAGTGAGTCCTTATTATCTGATTTTCTTAACTTGTCGATCTTGAATATGCAGCGGAGGATAACCCATTATATGATTATCCTGAAGAGTTGTCAGAGGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGAGCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACGGGAGATAGAATCTATGCTCGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTATGGGCTAGCGCTTGAGCTGGCTGTGATGTTTCCTGTTGGGCTGGCTATATGTGAGAGAACTTTTGGTGTTAGTATGCTGATGAATTGTATTCCCAGCCTCAGCTGTTAGACCTGTAACTCGATATGATCACTGAAGGAGAAGTGTAGGAGTAAGAAGAATGAATTATTAAGGCCGAGTTTAGTTCCAAAATTTTTCTTCAAACTTTCAATTTTTCTATCACATCAAAACTTTTCTACACACACAAACTTTCAACTTTTCTGTCACATCGTTCCAATTTTAACCAAACTTTCAATTATAGTGTGAACTAAACACACCCTAAATCTGGGAGAATTTCCTGGGGAAACCTGTAATCATTGAAGGCATGCATGCAGCTTGTTGTTGGATTAGATAGGTACAGGTCTGGTTTAGGTCCAAAACAAAAATTTTCACGTTGTCACATTAAATGTTTGGACACATACATGGAGTATTAAATGTAGGAAAAAAACAATTATACAGATTACGTGTAAATGGTGAGATGAATCTTTTAAGCCTAATTATGTCATGATTTGGTAATATGGTGCTACAGTAAACATTTGCTAATGATATATTAGTTAGGCTTAATAAATTCGTCTCGTAGTTTTCTAACGGAATCTGTAATTTATTTTATTATTAAACTATTAAATGTGTATCCGTATATCCGATATGATAACTAAACCTAAAATTTTTTCCCCAACTAAATAAGGCGGTAGCCATGCGACGCTCATTGCTTGAGTCATCATTGTAGAAAAAAAGTCTCATTTTACTCACTGTGTGAAGTGATGATGATTCTAGGCCCGGCCAGCCCAAATAGATGGAAGACCAGAAAAGTCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGGTGGACATCACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGTCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGATTTACTATACTTGATTCCGGTAACTTCTTCCTCCTTCCTTCCTTCCATGAATCAATAATTTGTGAGTACTCGTTAACTTGGTTGGGTAAACGATATGAGCGTGTTTCTCAAGAGATCAGATGG]
[-] EMBL AK105537 [CCCACTGTAATCTGATTGATGTGTGTTTACTATGGTATATTCTTCTGTGGGGATATTTTCTGAACATTCTCTTTTTTACATCAGATTACAAGTGGACAATGACGATGATGTATGTTATGATGATGACGATCCTTATGGTACAGATGATTCAAATGGTAATTGTACAACCATCCACCTGCTTCCATGGTGAACCAGTGAGTCCTTATTATCTGATTTTCTTAACTTGTCGATCTTGAATATGCAGCGGAGGATAACCCATTATATGATTATCCTGAAGAGTTGTCAGAGGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGAGCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACGGGAGATAGAATCTATGCTCGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTATGGGCTAGCGCTTGAGCTGGCTGTGATGTTTCCTGTTGGGCTGGCTATATGTGAGAGAACTTTTGGTGTTAGTATGCTGATGAATTGTATTCCCAGCCTCAGCTGTTAGACCTGTAACTCGATATGATCACTGAAGGAGAAGTGTAGGAGTAAGAAGAATGAATTATTAAGGCCGAGTTTAGTTCCAAAATTTTTCTTCAAACTTTCAATTTTTCTATCACATCAAAACTTTTCTACACACACAAACTTTCAACTTTTCTGTCACATCGTTCCAATTTTAACCAAACTTTCAATTATAGTGTGAACTAAACACACCCTAAATCTGGGAGAATTTCCTGGGGAAACCTGTAATCATTGAAGGCATGCATGCAGCTTGTTGTTGGATTAGATAGGTACAGGTCTGGTTTAGGTCCAAAACAAAAATTTTCACGTTGTCACATTAAATGTTTGGACACATACATGGAGTATTAAATGTAGGAAAAAAACAATTATACAGATTACGTGTAAATGGTGAGATGAATCTTTTAAGCCTAATTATGTCATGATTTGGTAATATGGTGCTACAGTAAACATTTGCTAATGATATATTAGTTAGGCTTAATAAATTCGTCTCGTAGTTTTCTAACGGAATCTGTAATTTATTTTATTATTAAACTATTAAATGTGTATCCGTATATCCGATATGATAACTAAACCTAAAATTTTTTCCCCAACTAAATAAGGCGGTAGCCATGCGACGCTCATTGCTTGAGTCATCATTGTAGAAAAAAAGTCTCATTTTACTCACTGTGTGAAGTGATGATGATTCTAGGCCCGGCCAGCCCAAATAGATGGAAGACCAGAAAAGTCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGGTGGACATCACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGTCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGATTTACTATACTTGATTCCGGTAACTTCTTCCTCCTTCCTTCCTTCCATGAATCAATAATTTGTGAGTACTCGTTAACTTGGTTGGGTAAACGATATGAGCGTGTTTCTCAAGAGATCAGATGG]
consensusID : consensus_16178#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1462 fasta sequence
[TTTTTTTTTTGGGAGTAAAATGAGACTTTTTTTCAACAATGACTCCCGCAATGAGCTATCTATCTTATCCAACAACAAGCTGCTTGCCTTCAATGATTACACGTTTTTTTTCGCCAGGAAATTCTCCCATATTTAAT-AATTCATTCT-TCTTACTCCT-ACACT-TCTCCTTCAGTGATCATATCGAGTTACAGGTCT-AACACGCTGAGAGTTGAGAGTTGCT-GAGGCTGGGAATACAATTCATCAGTATACT-AACACCAAAAGTTCTCTCACATATAGCCAACCTAACAGGTAAACATCACAGCCAGCT-CAACCGCTAGCCCATACAT-CAT-CTTATCTCT-AGTTACTACCCATATTTGTACCCCAAGCATAGATTCTATCTCCCGTACTTCATCCCTTATCTTCCTCCACCTCTTACCTTCTCATACTCGGGATCAGAACCGGCTAGGTCTGACAAATGGATTCTCGCTATTGGAATCATCATCCTCATCTTCTGACAACTCCGCAGGATAATC-TAT-ATGGATAATCCT-CGGATTAGAATCATCTGTAACAACGGGATCGTCATCATCATAACACACATCATCGCCATTGTCCACTTGTAACCTGATGTAAAAAGGAATGCTCAGAAAAGATCACCACAGAAGAATGTACCATAGTAAACACATGTCAATCAGATTACAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCTCCTTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGATGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCACCCTCTTCAAAAGAGGTAATCCTTGGTTCTGCTGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTAATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGTGCAAAGCGAGCATTTCTTCCAAGGTCCTCATGCCTCTGTCTGGCTGCTGATCGTAGCTGGTCTTGTTTTTTATCTTGATTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCC-AAGTCAGAATGCAGAAGAGAGTGCAAAACATCTTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAATTCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGCTCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTGGTCCCTCTCCTCAGCCTCCGCCTCCGTCGCGGACGCCATCGCCGCCGCCCGCCGGCAAAGCCAAGGTAGGGGTGGT]
[-] EMBL BI805849 [TTTTTTTTTTGGGAGTAAAATGAGACTTTTTTTCAACAATGACTCCCGCAATGAGCTATCTATCTTATCCAACAACAAGCTGCTTGCCTTCAATGATTACACGTTCGAATTCGCCAGGAAATTCTCCCATATTTAATGAGTTCATTCTAACTTACTCCTAACACTATCTCCTTCAGTGATCATATCGAGTTACAGGTCTCAACACGCTGAGAGTTGAGAGTTGCTNGAGGCTGGGAATNCAATTCATCAGTATACTAAACACCAAAAGTTCTCTCACATATAGCCCACCTAACAGGTAAACATCACAGCCAGCTACAACCGCTAGCCCATACATACATACTTATCTCTAAGTAACTACCCATATTTGTACCCCAAGCATAGATTCTATCTCCCGTACTTCATCCCTTATCTTCCTCCACCTCTTACCTTCTCATACTCGGGATCAGAACCGGCTAGGTCTGACAAATGGATTCTCGCTATTGGAATCATCATCCTCATCTTCTGACAACTCCGCAGGATAATC TAT ATGGATAATCCT CGGATTAGAATCATCTGTAACAACGG ]
[+] EMBL CB633071 [ tccTTTTTTTTCGCCAGGAAATTCTCCCATATTTAAT AATTCCCTCT TCTTACTCCT ACACT TCTCCTTCAGTGATCATATCGAGTTACAGGTCT AACACGCTGAGAGTTGAGAGTTGCT GAGGCTGGGAATACAATTCATCAGTATACT AACACCAAAAGTTCTCTCACATATAGCCAACCTAACAGGTAAACATCACAGCCAGCT CAACCGCTAGCCCATACAT CAT CTTATCTCT AGTTACTACCCATATTTGTACCCCAAGCATAGATTCTATCTCCCGT CTTCATCCCTT TCTTCCTCCACCTCTT CCTTCTCATACTCGGGATCAGAACCGTCTAGGTCTGA AAATGGATTCTCGCTATTGGAATCATCATCCTCATCTTCTGACAACTCCGCAGGATAATCATATAATGGATTATCCTCCGCATTTGAATCATCTGTATCATAAGGATCGTCATCATCATAACACACATCATCGCCATTGTCCACTTGTAACCTGATGTAAAAAGGAATGCTCAGAAAAGATCACCACAGAAGAATGTACCATAGTAAACACATGTCAATCAGATTACAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCTCCTTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGATGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCACC ]
[-] EMBL AU082595 [ TTTTTTTTCGCCAGGAAATTCTCCCATATTTAAT AATTCATTCT TCTTACTCCT ACACT TCTCCTTCAGTGATCATATCGAGTTACAGGTCT AACACGCTGAGAGTTGAGAGTTGCT GAGGCTGGGAATACAATTCATCAGTATACT AACACCAAAAGTTCTCTCACATATAGCCAACCTAACAGGTAAACATCACAGCCAGCT CAACCGCTAGCCCATACAT CAT CTTATCTCT AGTTACTACCCATATTTGTACCCCAAGCATAGATTCTATCTCCCGT ]
[-] EMBL CB633070 [ GTCCACTTGTAACCTGATGTAAAAA GAATGCTCAGAAAAGATCACCACAGAAGAATGTACCATAGTAAACACATGTCAATCAGATTACAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCTCCTTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGATGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCACCCTCTTCAAAAGAGGTAATCCTTGGTTCTGCTGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTAATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGTGCAAAGCGAGCATTTCTTCCAAGGTCCTCATGCCTCTGTCTGGCTGCTGATCGTAGCTGGTCTTGTTTTTTATCTTGATTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCC AAGTCAGAATGCAGAAGAGAGTGCAAAACATCTTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAATTCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGCTCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTGGTCCCTCTCCTCAGCCTCCGCCTCCGTCGCGGACGCCATCGCCGCCGCCCGCCGGCAAAGCCAAGGTAGGGGTGGT]
[-] EMBL C25842 [ TGGTCTTGTTTTTTATCTTNATTAGTTCTGTTGTCCAATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAAGTCAGAATGCAGAAGAGAGTGCAAAACATCTTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAATTCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGCTCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGA GGNTTGCGCTTGANACGGACGACGATGGGTTTGTCCCTCTCCTCAGCCTCCGCCTCCGTTGCGGACGCCATCGCCGC ]
consensusID : consensus_16178#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1296 fasta sequence
[NCTCGGCC-TTAATAATTCA-TTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGCTGGGAATACAATTCATCAGCATAC-TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG-TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA-CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCGCCGGCAAA-GCCAAGGTAGGGTTGGTTGGTTCTCTCGCCGTCAGAACAAACGAGAACAAGTT]
[-] EMBL CB096599 [NCTCGGCCTTTAATAATTCA TTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTANCAGCTGAGNCTGGGAATACAATTCATCAGCATAC TANCACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCTTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAGTGTTCCCGTATAAG GGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAG ]
[+] EMBL CB664341 [ CTCGGCC TTAATAATTCAGTTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGCTGGGAATACAATTCATCAGCATAC TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGATCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGA ]
[-] EMBL AK058945 [ TCGGCC TTAATAATTCA TTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGCTGGGAATACAATTCATCAGCATAC TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCGCCGGCAAA GCCAAGGTAGGGTTGGTTGGTTCTCTCGCCGTCAGAACAAACGAGAACAAGTT]
[+] EMBL CB664421 [ TCGGCC TTAATAATTCA TTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGCTGGGAATACAATTCATCAGCATAC TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCNAAGCCAGCATTTCTT CAAGATCCTCATGCCTCTGT ]
[+] EMBL CB664380 [ A TTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGCTGGGAATACAATTCATCAGCATAC TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCCTCCAAGATCCTCATGCCTCTGTC ]
[+] EMBL CB664343 [ TACTCCGACGCTTCCCTTTAAGTGATCATATCGAGTTA AGGTC GACAACTGAGGCTGGGAATACAATTCATCAGCATAC TAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAACCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAAATTCTATCTCCCGTCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAGATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAAGATAATCATATGATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCGTCATCATAACATACATCGTCGTCATTGCTCCACTTGAAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACCTCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCCATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGATCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCAT ]
[+] EMBL CB646988 [ gAGTGATCATATCGAGTTACAGGTCTAACAGCTGAGGGTGGGAATACAATTCATCAGCATACATAACACCAAAAGTTCTCTCACATATAGCCAGCCCAACAGGAAACATCACAGCCAGCTCAAGCGCTAGCCCATACATCATCTTATCTCTAATTACTACCCATATTTGTACCCCGAACATAGATTCTATCTCCCGGCTTCATCCCTTTCTTCCTCCACCTCTTCCTTCTCATACTCGGGATCAGAACCGTCTAGCTCTGAAAATGGATTCTCGCTATTGGAATCATCATCCTCATCCTCTGACAACTCTTCAGGATAATCATATAATGGGGTATCCTCCGCATTTGAATCATCTGTACCATAAGGATCGTCATCATCATAACATACATCATCGTCATTG TCCACTTGAAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCG ]
[-] EMBL CB664379 [ AACATACATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCGCCGGCAAA GC ]
[-] EMBL CB664420 [ AACATACATCATCGTCATTG TCCACTGNTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCTTCAACGGGCAAA GC ]
[-] EMBL CB654825 [ CATACATCATCGTCATTG TCCACTTGTAATAGGGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCGCCGGCAAATTCAAAGGGAGGGTT ]
[-] EMBL CB668338 [ CATGCATCATCGTCATTG TCCACTTGTAATAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CCTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTGGCGGC ]
[-] EMBL CB664342 [ ATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCA CTTCCGTGACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTCTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTCTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCGTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTATGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCAGGGGCAAA GC ]
[-] EMBL CB664340 [ TCCGTGCCAGTATATATGTCATAAACATCTGAATCTTCCGATTGAGCCAGTGAAATAATATCTGATTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGATAATTGCATAAAATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATGTACTTGGACAGCATCATAAAGATGGCATACTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTTTCGGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGGTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTCTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCGGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGCGAGGGCTTGCGCTTGACACGGACGACGATGGGGTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGC ]
[-] EMBL CB646987 [ AAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGAATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATTCCTGTCTCCTGTCCGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCCTCATGCCTCTGTATGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTGTTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGAGAGTGCAAAACATCGTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGAAGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACTGAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAGAAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCCCTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCCGCCCGCCGGCAAA GCCAAGGTAGGGT ]
consensusID : consensus_16178#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 764 fasta sequence
[TCTTTTGAAGAGGGTGCAATTTTATGCAATTTTCTTCCACTTATACGGGAACATTTGCCATCAGCTGCTGAAGAAATTGAATCAGATATTATTTCGCTGGCACAATCGGAAGATTCAGATGTTTATGACATATATACTGTCAAGGAGGTGGATGATGATACAACAATGGAGGGCACATCTTCAGCTCCATACCCACTGTTACAAGTGGACAATGGCGATGATGTGTGTTATGATGATGACGATCCTTATGATACAGATGATTCAAATGCGGAGGATAATCCATTATATGATTATCCTGCGGAGTTGTCAGAAGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGACCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACGGGAGATAGAATCTATGCTTGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTATGGCCTAGCGGTTGAGCCTGGCTTGTGATGTTTACCTGTTAGGTTGGCTATATGTGAGAGAACTTTTTGGTGTTAGTATACTGATGAATTGTATTCCCAGCCTCAGCAACTCTCAACTCTTCAGCGTGTTAGACCTGTAACTCGATATGATCACTGAGGGGAGAAGTGTAGGAGTAAGAAGAATGAATTATTAAATATGGGGAGAATTTCCTGGCGAATTTCGAACGTGTAATCATTGAAGGCAAGCAGCNTTGGTTGNTGGATAAGATAGATAGCTCATTGGCTGGAG]
[+] EMBL CA765117 [TCTTTTGAAGAGGGTGCAATTTTATGCAATTTTCTTCCACTTATACGGGAACATTTGCCATCAGCTGCTGAAGAAATTGAATCAGATATTATTTCGCTGGCACAATCGGAAGATTCAGATGTTTATGACATATATACTGTCAAGGAGGTGGATGATGATACAACAATGGAGGGCACATCTTCAGCTCCATACCCACTGTTACAAGTGGACAATGGCGATGATGTGTGTTATGATGATGACGATCCTTATGATACAGATGATTCAAATGCGGAGGATAATCCATTATATGATTATCCTGCGGAGTTGTCAGAAGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGACCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACGGGAGATAGAATCTATGCTTGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTATGGCCTAGCGGTTGAGCCTGGCTTGTGATGTTTACCTGTTAGGTTGGCTATATGTGAGAGAACTTTTTGGTGTTAGTATACTGATGAATTGTATTCCCAGCCTCAGCAACTCTCAACTCTTCAGCGTGTTAGACCTGTAACTCGATATGATCACTGAGGGGAGAAGTGTAGGAGTAAGAAGAATGAATTATTAAATATGGGGAGAATTTCCTGGCGAATTTCGAACGTGTAATCATTGAAGGCAAGCAGCNTTGGTTGNTGGATAAGATAGATAGCTCATTGGCTGGAG]
consensusID : consensus_16178#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 696 fasta sequence
[ACACAGAGGCTAGCATCACTCCCAGTGTGCTTACAGCCCTCTTCTCATGTTGCACACTTGGAGCTCCCAGCTGCAGCTGATGGGAATCCTACTAGGATCCCAGTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTNTGGTGAGAAGAGTGATGGTCTTGTGACAAGGAAGGATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAGAGCGGAAGTTGGACCATGCATGGATGGTTTATTCCTCACTCAATGAGGAACCTAGGGATCAGGCAGACACATCGCAGGGAATGGTCCAATAATAGTGTTCAGAACAGCTCCTGCTAGGCCCCATGGGGAAGTCTCCATTCTGGAGCGTGTCCATGGTGTCTGTTGACAATGGGTGGTAGCAAAGGAGGTTGAGAAATAAGGGCAGAACCATGGTCCATCTGGTTGCAGCAGAGGAGCAAAAAAGCTTTATTGGGTAATTCACTCAAATTCAACTATTCATGGTAATAAAATATAACTGTACATACTGTTCATGCTACCTTAGGTTATATCATGCCAAGCATGCATATTACAAGATAGGCATAAATTGGCCATGTTCATGTGCAATTGCTTCCTTTATGCTATGAAGTGGCATGTGAAATTAAAGTGTATGGAGGAAATGCTATATTAGATCTCATCTAAAAAAA]
[+] EMBL AU093018 [ACACAGAGGCTAGCATCACTCCCAGTGTGCTTACAGCCCTCTTCTCATGTTGCACACTTGGAGCTCCCAGCTGCAGCTGATGGGAATCCTACTAGGATCCCAGTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGCAAGGTNTGGTGAGAAGAGTGATGGTCTTGTGACAAGGAAGGATGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAGAGCGGAAGTTGGACCATGCATGGATGGTTTATTCCTCACTCAATGAGGAACCTAGGGATCAGGCAGACACATCGCAGGGAATGGTCCAATAATAGTGTTCAGAACAGCTCCTGCTAGGCCCCATGGGGAAGTCTCCATTCTGGAGCGTGTCCATGGTGTCTGTTGACAATGGGTGGTAGCAAAGGAGGTTGAGAAATAAGGGCAGAACCATGGTCCATCTGGTTGCAGCAGAGGAGCAAAAAAGCTTTATTGGGTAATTCACTCAAATTCAACTATTCATGGTAATAAAATATAACTGTACATACTGTTCATGCTACCTTAGGTTATATCATGCCAAGCATGCATATTACAAGATAGGCATAAATTGGCCATGTTCATGTGCAATTGCTTCCTTTATGCTATGAAGTGGCATGTGAAATTAAAGTGTATGGAGGAAATGCTATATTAGATCTCATCTAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 AGAAAAGTCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGG 60
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 TGGACATCACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGG 120
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 AGCGCAGTCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCC 180
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ATCGCCATCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCT 240
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 TCTTGATTTACTATACTTGATTCCGTACAACCGCTCATGGATAAAGAGCCAACCATGGAG 300
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GATTTGCCTTCAACGCTGGGGCAGCCTTCTACTTCTGCATCATCGGTTGATGCTAGATAT 360
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 TCAGCCGACAGGACTGAAGATTCACAGCTCTTCCTCTCCGTCCCAGCTTTAAACCAAGCT 420
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GCGTCTTATCTGGCCCAGACGGCCTCATATCTTACCCAGTGCCTCCCTGTATCTGGTTAC 480
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ACAGCTATTTCTGAGGAAGGGCAAGAACTAGCAACTCTGCCACCTGCGTCAACTGTTGGT 540
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GGATCCTCTTTTCAGGCTTCTTCCGAACAGTCAGCAGACTCATCTCCTGGTGAAATTGAT 600
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 AATACTGGAAGCTCATCTCAAGAAATCACAGAACAGATGGCACCTTTGCGCGTCTTCCAG 660
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 AATGGGGCTTCACTGTTTCAAGGTCTTGTAGAACGTGCTCGGAAAACTGTTCGTGGCTCA 720
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GCCAATGATATTGGATGGCTTCAGCAGGATCAAAGCTTACCTCCAACTGAGGACGGAACT 780
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GCCAGATTCTTGGAAATTCTTGATGCTGTGAGAAAAAACGAACACAAGCTGCCTGATTCG 840
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ATGGTCTATCTGTTGGTTCCAGGTTTGTTTAGTAACCATGGGCCTCTTTACTTTGTCAAG 900
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 -------------------------------------------TTTTTTTTTTGGGAGTA 17
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ACAAAATCATATTTCTCCAAGATGGGTCTGGCTTGTCACATTGCCAAGATTCACAGTGAG 960
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 AAATGAGACTTTTTTTCAACAATGACTCCCGCAATGAGCTATCTATCTTATCCAACAACA 77
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 TCTTCAGTAAGTAAAAATGCAAGGGAGATAAAGGAATATATAGAAGAAATATACTGGGGA 1020
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 AGCTGCTTGCCTTCAATGATTACACGTTTTTTTTCGCCAGGAAATTCTCCCATATTTAAT 137
consensus_16178#3 -----------------------------------------------NCTCGGCCTTAAT 13
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 TCGAAGAAGCGGGTGCTACTTCTCGGCCATAGCAAGGGTGGTGTAGATGCAGCAGCAGCC 1080
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 AATTCATTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAA 197
consensus_16178#3 AATTCATTCTTCTTACTCCTACACTTCTCCTTCAGTGATCATATCGAGTTACAGGTCTAA 73
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 CTCTCCCTTTACTGGCCACAACTGAAAGACAAGGTCGCAGGTTTGGCTTTAGCTCAAAGC 1140
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 CACGCTGAGAGTTGAGAGTTGCTGAGGCTGGGAATACAATTCATCAGTATACTAACACCA 257
consensus_16178#3 CA------------------GCTGAGGCTGGGAATACAATTCATCAGCATACTAACACCA 115
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 CCATATGGAGGAAGCCCGGTTGCTTCAGATATCTTGCGAGAAGGCCAGCTTGGTGACTAT 1200
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 AAAGTTCTCTCACATATAGCCAACCTAACAGGTAAACATCACAGCCAGCTCAACCGCTAG 317
consensus_16178#3 AAAGTTCTCTCACATATAGCCAGCCCAACAGG-AAACATCACAGCCAGCTCAAGCGCTAG 174
consensus_16178#1 ------------------------------------------------------------
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GTCAGGTTACGTAAACTCATGGAGATTTTGGTATCAAAAGTCCTTAAGGGTGATCTTCAG 1260
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 CCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCAAGCATAGATTCTAT 377
consensus_16178#3 CCCATACATCATCTTATCTCTAGTTACTACCCATATTTGTACCCCGAGCATAGATTCTAT 234
consensus_16178#1 ---------------------------------------------------------CCC 3
consensus_16178#4 ---------------------------------TCTTTTGAAGAGGGTGCAATTTTATGC 27
consensus_16178#0 GCTCTGGAAGACCTGACATATGAGAGGAGGAAAGAATTCCTGCGGCAGAACCCATTGCCT 1320
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 CTCCCGTACTTCATCCCTTATCTTCCTCCACCTCTTACCTTCTCATACTCGGGATCAGAA 437
consensus_16178#3 CTCCCGT-CTTCATCCCTT-TCTTCCTCCACCTCTT-CCTTCTCATACTCGGGATCAGAA 291
consensus_16178#1 ACTGTAATCTGATTGATGTGTGTTTACTATGGTATATTCTTCTGTGGGGATATTTTCTGA 63
consensus_16178#4 AATTTTCTTCCACTTATACGGGAACATT-TGCCATCAGCTGCTGAAGAAAT-TGAATCAG 85
consensus_16178#0 CCTGAGGTTCCCATTGTCTCGTTCCACACAGAGGCTAGCATCACTCCCAGTGTGCTTACA 1380
consensus_16178#5 -------------------------ACACAGAGGCTAGCATCACTCCCAGTGTGCTTACA 35
consensus_16178#2 CCGGCTAGGTCTGACAAATGGATTCTCGCTATTGGAATCATCATCCTCA-TCTTCTGACA 496
consensus_16178#3 CCGTCTAGCTCTGA-AAATGGATTCTCGCTATTGGAATCATCATCCTCA-TCCTCTGACA 349
* * *
consensus_16178#1 ACATTCTCTTTTTTACATCAGATTACAAGTGGACAATGACGATGATGTATGTTATGATGA 123
consensus_16178#4 ATATTATTTCGCTGGCAC--AATCGGAAGATTCAGATGTTTATGACATATATACTGTCAA 143
consensus_16178#0 GCCCTCT-CTCATGTTGCACACTTGGAGCTCCCAGCTGCAGCTGATGGGAATCCTACTAG 1439
consensus_16178#5 GCCCTCTTCTCATGTTGCACACTTGGAGCTCCCAGCTGCAGCTGATGGGAATCCTACTAG 95
consensus_16178#2 ACTCCGCAGGATAATC-TATA-TGGATAATCCTCGG-ATTAGAATCATCTGTAACAACGG 553
consensus_16178#3 ACTCTTCAGGATAATCATATAATGGGTTATCCTCCGCATTTGAATCATCTGTACCATAAG 409
* *
consensus_16178#1 TGAC--GATCCTTATGGTACAGATGATTCAAATGGTA-ATTGTACAACCATCCACCTGCT 180
consensus_16178#4 GGAG--GTGGATGATGATACA-ACAAT--GGAGGGCA-CATCTTCAGCTCCATACCCACT 197
consensus_16178#0 GATCCCAGTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGC 1499
consensus_16178#5 GATCCCAGTTGTAATGCCACTTTCAGCTGCAATGGCAGCATGCTCACAACTTCTGGTGGC 155
consensus_16178#2 GATCGTCATCATCATAACACACATCATCGCCATTGTC-CACTTGTAACCTGATGTAAAAA 612
consensus_16178#3 GATCGTCATCATCATAACATACATCATCGTCATTGTC-CACTTGTAAT------------ 456
* ** * * * *
consensus_16178#1 TCCATG-GTGAACCA-----------GTGAGTCC-TTATTATCTG-----------ATTT 216
consensus_16178#4 GTTACAAGTGGACAATG---------GCGATGAT-GTGTGTTATG-----------ATGA 236
consensus_16178#0 AAGGTATGGTGAGAAGA---------GTGATGGTCTTGTGACAAGGA---------AGGA 1541
consensus_16178#5 AAGGTNTGGTGAGAAGA---------GTGATGGTCTTGTGACAAGGA---------AGGA 197
consensus_16178#2 GGAATGCTCAGAAAAGATCACCACAGAAGAATGTACCATAGTAAACACATGTCAATCAGA 672
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TCTTAACTTGT-CGATCTTGAATATGCA---GCGGAGGATAACCCATTATATGATTA--- 269
consensus_16178#4 TGACGATCCTTATGATACAGATGATTCAAATGCGGAGGATAATCCATTATATGATTA--- 293
consensus_16178#0 TGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAGAGCGGAAGTTGGACCATGCATG--- 1598
consensus_16178#5 TGCTGAAGTTCCTGGATCAGTAGTGGTCCGGCCAGAGCGGAAGTTGGACCATGCATG--- 254
consensus_16178#2 TTACAGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCTCCTT 732
consensus_16178#3 ----AGTGGGTATGGAGCTGAAGATGTGCCCTCCATTGTTGTATCATCATCCACCTCCGT 512
* * * *
consensus_16178#1 TCCTGAAGAGTTGTCAGAGG-ATGAGGA--TGATGATTCCAATAGCGAGAATCCATTTTC 326
consensus_16178#4 TCCTGCGGAGTTGTCAGAAG-ATGAGGA--TGATGATTCCAATAGCGAGAATCCATTTTC 350
consensus_16178#0 GATGGTTTATTCCTCACTCA-ATGAGGAACCTAGGGATCAGGCAGACACATCGCAGGTAT 1657
consensus_16178#5 GATGGTTTATTCCTCACTCA-ATGAGGAACCTAGGGATCAGGCAGACACATCGCAGGGA- 312
consensus_16178#2 GACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGA 792
consensus_16178#3 GACAGTATATATGTCATAAACATCTGAATCTTCCGATTGTGCCAGCGAAATAATATCTGA 572
* * *** ** * * * * ** * * *
consensus_16178#1 ---AGAGCTAGACGGTTCTGATCCCGAGTATGAG-AAGGAAGAGGTGGAGGA--AGAAAG 380
consensus_16178#4 ---AGACCTAGACGGTTCTGATCCCGAGTATGAG-AAGGAAGAGGTGGAGGA--AGAAAG 404
consensus_16178#0 GTGAAGCCCTGCTGACTCTGCTTGTTGAGGTTGC-GCAGAAACGGAGGCATG--AGATGG 1714
consensus_16178#5 ---ATGGTCCAATAATAGTGTT---CAGAACAGC-TCCTGCTAGGCCCCATG--GGGAAG 363
consensus_16178#2 TTCAATTTCTTCAGCAGCTGATGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAA 852
consensus_16178#3 TTCAATTTCTTCAGCAGCTGACGGCAAATGTTCCCGTATAAGTGGAAGAAAATTGCATAA 632
* ** **
consensus_16178#1 GGATGAAGACGGGAGATAGAATCTA-TGCTCGGGG--TACAAATATGGGTAGTAACTAGA 437
consensus_16178#4 GGATGAAGACGGGAGATAGAATCTA-TGCTTGGGG--TACAAATATGGGTAGTAACTAGA 461
consensus_16178#0 CTATGAAAGATGAATAAAAATGTTAGTGTTGCTCT--GACAGATATTTGTAATCG-TAGA 1771
consensus_16178#5 -TCTCCATTCTGGAGCGTGTCCATGGTGTC-TGTT--GACAATGGGTGGTAGCAA-AGGA 418
consensus_16178#2 AATTGCACCCTCTTCAAAAGAGGTAATCCTTGGTTCTGCTGGATGCTTCTCTTCATCAGA 912
consensus_16178#3 AATTGCGCCCTCTTCAAAAGACGTAATCCTTGGTTCTGTGGGATGCTTCTCTTCATCAGA 692
* * * * **
consensus_16178#1 GATAAGATGATGTATGGGCTAGCGCTTGAGC-TGGCT-GTGATGTTT-CCTGTTGGGCTG 494
consensus_16178#4 GATAAGATGATGTATGGCCTAGCGGTTGAGCCTGGCTTGTGATGTTTACCTGTTAGGTTG 521
consensus_16178#0 CTTCTGTTGTTGAATG---TACTGTCCAAACTTATGCTGAAACTGCTTCTGGGCCACTTT 1828
consensus_16178#5 GGTTGAGAAATAAGGG---CAGAACCATGGTCCATCTGGTTGCAGCAGAGGAGCAAAAAA 475
consensus_16178#2 ATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTAATT 972
consensus_16178#3 ATCTACTTGGACAGCATCATAAAGATGGCATATTTCTCGTAGTGATTCATCAACTTCATT 752
* *
consensus_16178#1 GCTATATGTGAG----AGAACTTTT-GGTGTTAGTATGCTGATGAATTGTATTCCCAGCC 549
consensus_16178#4 GCTATATGTGAG----AGAACTTTTTGGTGTTAGTATACTGATGAATTGTATTCCCAGCC 577
consensus_16178#0 TTTTTGTTTGGTTTACAGAAGCTTCATATATCAAC-TGAATCTGAAAGGTGAAAAGGGCA 1887
consensus_16178#5 GCTTTATTGGGT----AATTCACTCAAAT-TCAAC-TA----TTCATGGT-AATAAAATA 524
consensus_16178#2 CCTGTCTCCTTTC--CGACTCCTCCAAATTTGTGCAAAGCGAGCATTTCTTCCAAGGTCC 1030
consensus_16178#3 CCTGTCTCCTTTC--CGACTCCTCCAAATTTGCGCAAAGCGAGCATTTCTTCCAAGATCC 810
* * * * * *
consensus_16178#1 TCAGC-------------------TGTTAGACCTGTAACTCGATATG--ATCACTGAAGG 588
consensus_16178#4 TCAGCAACTCTCAACTCTTCAGCGTGTTAGACCTGTAACTCGATATG--ATCACTGAGGG 635
consensus_16178#0 ACAATGG--------------AAGCGTTTCTCTTTTTTTTTTTAATT-TACCATAAGGAA 1932
consensus_16178#5 TAACTGT--------------ACATACTGTTCATGCTACCTTAGGTTATATCATGCCAAG 570
consensus_16178#2 TCATGCCTCTGTCTGGCTGCTGATCGTAGCTGGTCTTGTTTTTTATCTTGATTAGTTCTG 1090
consensus_16178#3 TCATGCCTCTGTCTGGCTGCTGACCGTAGCTGGTCTTGTTTTTTATCTTGCTTAGTTCTG 870
* * *
consensus_16178#1 -AGAAGTGTAGGAGT-AAGAAGAATGAATTA--TTAAGGCCGAGTTTAGTTCCAAAATTT 644
consensus_16178#4 GAGAAGTGTAGGAGT-AAGAAGAATGAATTA--TTAAATATGGGGAGAATTTCCTGGCGA 692
consensus_16178#0 ATTGTATGATTTGGTCGTTTCTCATGTCTCATGGTATTCCCCTTCCCAATCAGGTGATTC 1992
consensus_16178#5 CATGCATATTACAA--GATAGGCATAAATTG-GCCATGTTCATGTGCAAT----TGCTTC 623
consensus_16178#2 TTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGA 1150
consensus_16178#3 TTGTTCCATTCCTTTGTCTTGCTCTTTATCTCTTTGGCATCCAAGTCAGAATGCAGAAGA 930
* * *
consensus_16178#1 TTCTTCAA---ACTTTCAATTTTTCTATCACATCAAAACTTTTCTACACACACAAACTTT 701
consensus_16178#4 AT-TTCGA---ACGTGTAATCATTGAAGGCAAGCAGCNTTGGTTGNTGGATA-AGATAGA 747
consensus_16178#0 GTCTACTA---GGTCTGAATTTGATTATGGTTGTAA-GTGTATTTAGGCATGATTCCATG 2048
consensus_16178#5 CTTTAT-----GCTATGAAGTGGCATGTGAAATTAAAGTGTATGGAGGAAATGCTATATT 678
consensus_16178#2 GAGTGCAAAACATCTTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGA 1210
consensus_16178#3 GAGTGCAAAACATCCTGAACTGCCTCAGAATGGTGTACTGTCTCAATGTGCTGTACCAGA 990
* ** *
consensus_16178#1 CAACTTT---TCTGTCACATCGTTCCAATTTTAACCAAACTTTCAATTATAGTGTGAACT 758
consensus_16178#4 TAGCTCA---TTGGCTGGAG---------------------------------------- 764
consensus_16178#0 AGTCATGGG-TATGCAACAGCTTGAGATCGCAATGTATAGAACTCTTTATATCCTAGTCT 2107
consensus_16178#5 AGATCTCA--TCTAAAAAAA---------------------------------------- 696
consensus_16178#2 AGTTTCTTAATTCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGCTCGGAGACT 1270
consensus_16178#3 AGTTTCTTAACCCGTGGTTCCTCTGAAGCTTTATTAGGAGCAGAGGATGGATCGGAGACT 1050
consensus_16178#1 AAACACACCCTAAATCTGGGAGAATTTCCTGGGGAAACCTGTAATCATTGAAGGCATGCA 818
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 GTTG-------------------------------------------------------- 2111
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 GAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAG 1330
consensus_16178#3 GAAAGGCTGGAGAAATCGAGCATAGCCTTCTTCACCGGCCTCTCATTGATCTCTAGCCAG 1110
consensus_16178#1 TGCAGCTTGTTGTTGGATTAGATAGGTACAGGTCTGGTTTAGGTCCAAAACAAAAATTTT 878
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 AAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTGGTCC 1390
consensus_16178#3 AAAGCGTCGGGGCGGGTCTGGGAGGGCTTGCGCTTGACACGGACGACGATGGGTTTGCCC 1170
consensus_16178#1 CACGTTGTCACATTAAATGTTTGGACACATACATGGAGTATTAAATGTAGGAAAAAAACA 938
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 CTCTCCTCAGCCTCCGCCTCCG------------------TCGCGGACGCCATCGCCGCC 1432
consensus_16178#3 CTCCCCTCAGCCTCCGCCTCCGAGGTGGAGGCAGCCTCCGTCGCGGCCGCCATCGCCGCC 1230
consensus_16178#1 ATTATACAGATTACGTGTAAATGGTGAGATGAATCTTTTAAGCCTAATTATGTCATGATT 998
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 GCCCGCCGGCAAAGCCAAGGTAGGGGTGGT------------------------------ 1462
consensus_16178#3 GCCCGCCGGCAAAGCCAAGGTAGGGTTGGTTGGTTCTCTCGCCGTCAGAACAAACGAGAA 1290
consensus_16178#1 TGGTAATATGGTGCTACAGTAAACATTTGCTAATGATATATTAGTTAGGCTTAATAAATT 1058
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 CAAGTT------------------------------------------------------ 1296
consensus_16178#1 CGTCTCGTAGTTTTCTAACGGAATCTGTAATTTATTTTATTATTAAACTATTAAATGTGT 1118
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 ATCCGTATATCCGATATGATAACTAAACCTAAAATTTTTTCCCCAACTAAATAAGGCGGT 1178
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 AGCCATGCGACGCTCATTGCTTGAGTCATCATTGTAGAAAAAAAGTCTCATTTTACTCAC 1238
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TGTGTGAAGTGATGATGATTCTAGGCCCGGCCAGCCCAAATAGATGGAAGACCAGAAAAG 1298
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TCTGGACTCTGGAAGAAAGAAAGCGGCGCGGCGGCCGGCGGGGCACGGCACGGTGGACAT 1358
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 CACAGGGAAGGAGAAACGCTTCTTCCCGTTGTTCCCAAATCCCAATCCGTGGGAGCGCAG 1418
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TCGCAGGCCAACGATCGAGTGGAGTCGAGCACAAGGAAAAGGAACGCATCGCCATCGTCA 1478
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TCGCCATCGCCTCCCTCCCTGTCCTGTCCAGCTCACCTCCAAACCCTCCATCTTCTTGAT 1538
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 TTACTATACTTGATTCCGGTAACTTCTTCCTCCTTCCTTCCTTCCATGAATCAATAATTT 1598
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 GTGAGTACTCGTTAACTTGGTTGGGTAAACGATATGAGCGTGTTTCTCAAGAGATCAGAT 1658
consensus_16178#4 ------------------------------------------------------------
consensus_16178#0 ------------------------------------------------------------
consensus_16178#5 ------------------------------------------------------------
consensus_16178#2 ------------------------------------------------------------
consensus_16178#3 ------------------------------------------------------------
consensus_16178#1 GG 1660
consensus_16178#4 --
consensus_16178#0 --
consensus_16178#5 --
consensus_16178#2 --
consensus_16178#3 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||