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Oryza sativa
cluster # 16209 cluster # 16209       Sequences # 30       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16209#0 length = 1073 sequences # 28  
consensus_16209#1 length = 621 sequences # 1  
consensus_16209#2 length = 279 sequences # 1  

consensusID : consensus_16209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 28
consensus length = 1073
fasta sequence
                              [TCGAGCGGATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA-CTTCTTG-AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT-GAAAAT-ATA-GCAAGCGC-CA-AG---ACCAAC-AATC--A-GGAAGAA-G-CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC-AGTATGAAATTGGTAGGCATGTGGACTTAGCC-CTGTCACATGGTTATC-AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC-CATATATGCTCATGTCAGTGTCAATAGTTTTTTG-GTAAAGAGAAATT-GTACAATCATATACTTGTA-CCACCAACATATACTTGAACCAGTTTCCT-GGTTGGACAGCT-A-GTTTTA-CC-TGTTGCACATCCAAATGGTTTAAAAAAAAA]

[+] EMBL AK060872             [TCGAGCGGATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGC                                            ]
[+] EMBL AK104254             [       GATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGCT A GTTTTA CC T                             ]
[+] EMBL CF325870             [       GATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS2902A             [        ATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGCCCACATCGTGCGNCTCGAGTTCCGCCGCCGNCTCGAGAGGGACTCCGACGCCCGCAAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAAGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS4306A             [        ATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGNCGCGNCGTCGGCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGNCGCA GGCGCCCACATCGTGCGGCTCGAGTTCCGCCGNCGGCTCGAGAGGGACTTCGACGGCCGNGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF325380             [                  GAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK104546             [                   AACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGCT A GTTTTA CC TGTTGCAa                      ]
[+] EMBL AK104634             [                   AACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GG                                                     ]
[+] EMBL BF430586             [                         CACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGCGCGCCTCGAGTTCCGCCCGCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA G                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB662919             [                          ACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATG                                                                                                                                                                                                                                                             ]
[+] EMBL AU032525             [                           CCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCACCCNCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCNCACCAGGCGCCGCGCCGTCGCCACCAAGATCNCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCA GGCGGCCACATCGTGCGCCTCGAGTNCCGCCGCCGCNTCGAGAGGGACTACGACGCCCGCGAGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB661545             [                                     TCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGACCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AG                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK065082             [                                      CATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAGGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGCT A GTTT                                    ]
[+] EMBL AY224557             [                                                TCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATAT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB659967             [                                                   TCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAACGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGCCGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTCCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTC                                                                                                                                                                                                       ]
[-] EMBL CB661546             [                                                                                                                                                                                                                                                                                               CCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGGTTCCT GGTTGGACAGCT A GTTTTC CC TG TGCAttaaaaga               ]
[-] EMBL CB659968             [                                                                                                                                                                                                                                                                                               CCGCGAGGAGCACGAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTCGAGTCCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTACT GGTTGGACAGCT ANGTTTT                                   ]
[+] EMBL CB663784             [                                                                                                                                                                                                                                                                                                                                           TCATCCCTGACACGGACGCCGGCCTCGTCGAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCCAGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGGTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTANCATCATATACTTGTACCCACC ACATATAC                                                                       ]
[-] EMBL CB662920             [                                                                                                                                                                                                                                                                                                                                                                                                                                 CCCAGGTTCAACCAGCCCTTTTTGGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGTTTGAGGGAGTGGAGGCTTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCTTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGACCCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCGGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCGGTTTCCT GGTTGGACAGCTGA GTTTTA CCGTGTTGCCCGTCCg                 ]
[+] EMBL AU032526             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTC ATCACCCGNACATCGGAAATGGCGGCCCGATTGATCGAGTTGGANGCGATGCAAANGGTTCTGCTTGAGGGCGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGNATGAGCTCAACATGTCCATACTNACACTCCTCGAT GAAAAT ATC GCAAGCGC CA AG   ACCNAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCNGTTTCCT GGTTGNACAGCT Aaaaaa                                    ]
[+] EMBL AT003436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGACCAGCGGAAATGAAGGACCGATTGATCGAGTTGGAAGCNATGCAAAAGGTTCTGCTTGAGGGAG GGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAANAACGCCTCNCAAAGATCCTGCAATCAAGCGACAAAAAATCGACC CTTCTTN AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGANAATGTTCGNTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCNCATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTNNGATTATGTTTCTNTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAANANAAATT GTACAATCATATACTTGTA CCNCCNACATATACTTGAACCAGTTTCCT GGTTGGACAGCT A GTTTTA CC TGTTGCCCCTCCAAAAAAAAAAAAAAAAAA]
[-] EMBL CB663783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aAAATGGAGGACCGATTGATTGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTACCACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGT                                                    ]
[+] EMBL BI809179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cCCTCACAAAGATCC GC ATCAAGCGAC CAAAATCGACACCTTCTTGAAAATGGTTGAACGGAATGAGCTCAACATGTCCATACT ACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACC AC  ATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC  AAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCTCGGTTGGACAGCT A GTTTTA CC TGTTGCACAaaaaa                ]
[+] EMBL AU174315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCGACA CTTCTTG AAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC CA AG   ACCAAC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC AAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGCT A GTTTTA CC TGTTGCACATCCATTTGGTTTAAAAAAAAA]
[+] EMBL BM038675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTTG AAATGGTTGAACGGAATGAGCTCNACATGTCCATACTAACACTCCTCGAT GAAAAT ATA GCAAGCGC C  AG   ACC AC AATC  A GGAAGAA G CTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTAC AGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATC  AAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTC ATAGTTTTTTG GTAAAGAGAAATT GTAC ATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAaaaa                                          ]
[+] EMBL BI810298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gcgGATGGAAAATGATACGCAAGCGCACATAGGACACAAACAAATCCAAGGGAAGAACGCCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTCCAAGTATGAAATTGGTAGGCATGTGGACTTAGCCACTGTCACATGGTTATCAAAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTCACATATATGCTCATGTCAGTGTCAATAGTTTTTTG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAACCAGTTTCCT GGTTGGACAGCT Aaaaaaaa a                                ]
[+] EMBL OS37945              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGATTATGTTTNTNTCTTGTATTTAGTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTNNG GTAAAGAGAAATT GTACAATCATATACTTGTA CCACCAACATATACTTGAGCCAGTTTCCT GGTTGGACAGCag                                          ]
[+] EMBL AU097224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCTCTTGTATTTANTTATTGTGTTC CATATATGCTCATGTCAGTGTCAATAGTTTTTTGCGTAAAGAGAAATTNGTACAATCATATACTTGTA CCACCAACATATACTTGAA CAGTTTCCT GGTTGGACAGCT A GTTTTAGCC T TTGCACATCCATTTGGTTTAAAAAAA  ]


>consensus_16209#0 TCGAGCGGATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCC CTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTC CGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGAC CCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGC CGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCAC GAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTC GAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCC AGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCA ATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTT CTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAA CGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACACTTCTTGAAATGGTTGAA CGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATGAAAATATAGCAAGCGCCAAG ACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAA TATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCCCTGTCACATGGTTATCAAAA TTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTT TCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCATGTCAGTGTCAATAGTTTTTT GGTAAAGAGAAATTGTACAATCATATACTTGTACCACCAACATATACTTGAACCAGTTTC CTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCAAATGGTTTAAAAAAAAA



consensusID : consensus_16209#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 621
fasta sequence
                              [GCGAGACAAGGGGGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACACTTCTTGAAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATGAAAATATAGCAAGCGCCAAGACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCCCTGTCACATGGTTATCAAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCATGTCAGTGTCAATAGTTTTTTGGTAAAGAGGAATTGTACAATCATATACTTGTACCACCAACATATACTTGAACCAGTTTCCTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCATTTAGTTTAAAAAAGAAAAAAAAAA]

[-] EMBL CA762090             [GCGAGACAAGGGGGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACACTTCTTGAAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATGAAAATATAGCAAGCGCCAAGACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAATATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCCCTGTCACATGGTTATCAAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCATGTCAGTGTCAATAGTTTTTTGGTAAAGAGGAATTGTACAATCATATACTTGTACCACCAACATATACTTGAACCAGTTTCCTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCATTTAGTTTAAAAAAGAAAAAAAAAA]


>consensus_16209#1 GCGAGACAAGGGGGTTCTCAATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGT TGGAAGCGATGCAAAAGGTTCTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATG ACCTTGTCAGCGCGAAAGAACGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGA CACTTCTTGAAATGGTTGAACGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATG AAAATATAGCAAGCGCCAAGACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATG TTCGCTCATCCATCCTGAAATATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCC CTGTCACATGGTTATCAAAATTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATA TTCAAGGGTCTGATTATGTTTCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCAT GTCAGTGTCAATAGTTTTTTGGTAAAGAGGAATTGTACAATCATATACTTGTACCACCAA CATATACTTGAACCAGTTTCCTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCATTTA GTTTAAAAAAGAAAAAAAAAA



consensusID : consensus_16209#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence
                              [CACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGNCGCGNCGTCGNCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGNCGTAGGGGCNCAACATCGTGCGGCTCGAGTTNCGNCGNCGNCTCGAGAGGGATTTCGGACGNCCGCGAGGGCTTTCGAGCGGCAAAGTTCGNGAGCAG]

[+] EMBL AU065806             [CACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGNCGCGNCGTCGNCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCGNCGTAGGGGCNCAACATCGTGCGGCTCGAGTTNCGNCGNCGNCTCGAGAGGGATTTCGGACGNCCGCGAGGGCTTTCGAGCGGCAAAGTTCGNGAGCAG]


>consensus_16209#2 CACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCCCTTGGCCTTGGCGCCATCTTC CAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCGCCCACCAGGCGN CGCGNCGTCGNCACCAAGATCTCCTGCATCGGATGGGACCCCGAGGGCGTCCTCGGCCCG NCGTAGGGGCNCAACATCGTGCGGCTCGAGTTNCGNCGNCGNCTCGAGAGGGATTTCGGA CGNCCGCGAGGGCTTTCGAGCGGCAAAGTTCGNGAGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16209#0      TCGAGCGGATAACGAACAGAACACACACCCACTGTGCTCATGGCTTCCTCTTCCTCCTCC 60
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CTTGGCCTTGGCGCCATCTTCCAAAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTC 120
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CGCCGCGCGCCCACCAGGCGCCGCGCCGTCGCCACCAAGATCTCCTGCATCGGATGGGAC 180
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CCCGAGGGCGTCCTCGGCCCGCCGCAGGGCGGCCACATCGTGCGCCTCGAGTTCCGCCGC 240
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CGCCTCGAGAGGGACTCCGACGCCCGCGAGGCCTTCGAGCGCCAGGTCCGCGAGGAGCAC 300
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      GAGCGACGCCGCCAGGAGCGCGAGGCGCGGGTCATCCCTGACACGGACGCCGGCCTCGTC 360
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      GAGTTCTTCCTCGACACGGAGGCGCGCGAGATCGAGGTAGAGATCGGCAGGCTCCGCCCC 420
consensus_16209#1      ------------------------------------------------------------
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      AGGCTCAACCAGCCCTTCTTCGACTACATCCAGCGCGAGATCGCCCAGATCAAGTTCTCA 480
consensus_16209#1      ----------------------------------GCGAGAC------AAGGGGGTTCTCA 20
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      ATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTT 540
consensus_16209#1      ATCACCCGAACAGCGGAAATGGAGGACCGATTGATCGAGTTGGAAGCGATGCAAAAGGTT 80
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAA 600
consensus_16209#1      CTGCTTGAGGGAGTGGAGGCCTATGACAAGTTGCAAAATGACCTTGTCAGCGCGAAAGAA 140
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACACTTCTTGAAATGGTTGAA 660
consensus_16209#1      CGCCTCACAAAGATCCTGCAATCAAGCGACAAAAAATCGACACTTCTTGAAATGGTTGAA 200
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      CGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATGAAAATATAGCAAGCGCCAAG 720
consensus_16209#1      CGGAATGAGCTCAACATGTCCATACTAACACTCCTCGATGAAAATATAGCAAGCGCCAAG 260
consensus_16209#2      ---CACACACCCACTGTGCTCATGGCTTC-CTCTTCCTC-----CTCCCTTGGCCTTGGC 51
                           *    * **   **  ***     * *** **                **      

consensus_16209#0      ACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAA 780
consensus_16209#1      ACCAACAATCAGGAAGAAGCTGTGGCTTTCATGGAGAATGTTCGCTCATCCATCCTGAAA 320
consensus_16209#2      GCCATCTTCCA--AAGCGGCTGCCCCCTCCTCCCGCCTCGCCCCGCCGTCCGCCGCGCG- 108
                        *** *   **  ***  ****   * * *         *  *   * ***  *  *   

consensus_16209#0      TATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCCCTGTCACATGGTTATCAAAA 840
consensus_16209#1      TATATTACAGTATGAAATTGGTAGGCATGTGGACTTAGCCCTGTCACATGGTTATCAAAA 380
consensus_16209#2      CCCACCAGGCGNCGCGNC--GTCGNCACCAAGATCTC-CTGCATCGGATGGG-ACCCCGA 164
                          *  *      *      ** * **    **  *  *    **  ****  * *   *

consensus_16209#0      TTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTT 900
consensus_16209#1      TTAGGTCATGAACCTGTAATTTGCAAGGACATGTCACATATTCAAGGGTCTGATTATGTT 440
consensus_16209#2      GGGCGTCCTCGGCCCG----NCGTAGGGGCNCAACAT---CGTGCGGCTCGAGTTNCGNC 217
                           *** *   ** *      * * ** *    **         ** **   **  *  

consensus_16209#0      TCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCATGTCAGTGTCAATAGTTTTTT 960
consensus_16209#1      TCTCTCTTGTATTTAGTTATTGTGTTCCATATATGCTCATGTCAGTGTCAATAGTTTTTT 500
consensus_16209#2      GNCGNCTCGAGAGGGATTTCGGACGNCCGCGAGGGCTTTCG--AGCGGCAA-AGTTCGNG 274
                            ** *       **   *    **      ***   *  ** * *** ****    

consensus_16209#0      GGTAAAGAGAAATTGTACAATCATATACTTGTACCACCAACATATACTTGAACCAGTTTC 1020
consensus_16209#1      GGTAAAGAGGAATTGTACAATCATATACTTGTACCACCAACATATACTTGAACCAGTTTC 560
consensus_16209#2      AGCAG------------------------------------------------------- 279
                        * *                                                        

consensus_16209#0      CTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCAAATGGTTTAAAAAAAAA------- 1073
consensus_16209#1      CTGGTTGGACAGCTAGTTTTACCTGTTGCACATCCATTTAGTTTAAAAAAGAAAAAAAAA 620
consensus_16209#2      ------------------------------------------------------------
                                                                                   

consensus_16209#0      -
consensus_16209#1      A 621
consensus_16209#2      -
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)