These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16236#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1521 fasta sequence [AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGAAAATCCAGTGGATGGTTTGGAAGGCTGGAAGAGTGAAGAAGGTATATACATTAAGAAGTCACAGAACTACTCACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT-ACATG-AGCAGTATCTGTATTTACA-CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC-TGCTCTT-TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC---ACTACAGAACACACTACTCTCTTAGA-GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA-TGCATATGCATTCCC-TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA-ACTGAACGCAGGCGT-ACGTCT-GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC-TCCGTGTCCACCAGCACTCGCTG-CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC-GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGTTGAACTGAAAACCTGCGGCGTACGT] [+] EMBL CB628375 [AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGAAAATCCAGTGGATGGTTTGGAAGGCTGGAAGAGTGAAGAAGGTATATACATTAAGAAGTCACAGAACTACTCACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCC ] [-] EMBL BM038056 [ tttttttttTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAAAGAGAGTATAT ACATG AGCAGNATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACGNGGTCTTGGGTATAGTAATATTCTACACATACAAATNGNATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCCGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTNCCTACGTACACTGCATATGCATTCCCGTGACATGTGGCTAGCTATANCTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGACACTGAACGCAGGCGT ACGTCTGGGGACTgtg ] [-] EMBL BQ907475 [ ttttTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGG GTCTCGTTCAG ] [-] EMBL BM419815 [ taAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATAACATGAAGCAGTATCTGTATTTACACCGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGG CCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGTAACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGG GTCTCGTTCAGGAATGCCCAGCTGCTTCCGTGTCCACCAGCACTCGCTGTCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGTTGATGACGATGGTCGCCGGCTGTGAGGAGCCG CGGCGA GGTGGGTCGCTGTGGGAGTACGANTG ] [+] EMBL CB629112 [ tACACAATTAACTATCTATATAGGAGAGACTCGAGAGAGTATAT ACATG AGCAGTATCTGTATTTACA CGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTAC TGCTCTT TGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACC ACTACAGAACACACTACTCTCTTAGA GGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCGA CCCTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTC ] [-] EMBL CB658310 [ ATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTC TAGAGGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACA TGCATATGCATTCCC TGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGA ACTGAACGCAGGCGT ACGTCT GCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGC TCCGTGTCCACCAGCACTCGCTG CTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGAT ] [-] EMBL CB658249 [ tTCGCCGGC GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTC CTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGTTGAACTGAAAACCTGCGGCGTACGT] consensusID : consensus_16236#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1300 fasta sequence [TTTTTTTTTTTTTTAACAGGGCAAATGATTTTTAGTTTTTTAC--ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG-ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC-GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT---AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGT] [+] EMBL CF278295 [TTTTTTTTTTTTTTAACAGGGCAAATGATTTTTAGTTTTTTACATATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGC ] [-] EMBL AU222485 [ TTTTTGAAACAGTGCAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCT ] [+] EMBL CB664244 [ CAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACGCACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACaa ] [+] EMBL CB661900 [ CAAATGATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACG ] [+] EMBL CB666014 [ CAAATGATTTTTAGTTTTTCCC TTATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAACCGCCc ] [+] EMBL CB645105 [ GATTTTTAGTTTTTTAC ATACCTATATATATATATCATANATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACCCAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGG ] [-] EMBL CB645104 [ ATTTTTAGTTTTTTAC ATATATATATATATATATCATACATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCAGGGAGT ] [-] EMBL CB666206 [ CTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC ] [-] EMBL CB628374 [ GACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAAAGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCATCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGGAGTATTCAATTCTCAGGTCGAGATGGAC ] [-] EMBL CB666013 [ AGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGA ] [-] EMBL CB653073 [ ACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGGGACGGCGTCTCGTTCAGGAATGCCCAGCGGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAGGTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTC ] [-] EMBL AU100998 [ GACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGCCGGCTCGCTGTGGAAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGC GCCCGGAGA GCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ] [-] EMBL CB664243 [ CCGGCGTGAGGAGCCGCCGGCGACGGGGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAAGGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTG ] [-] EMBL CB629111 [ GCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAAAGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACG ACGTCGACGACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCATCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTAGCACACAGGT] [-] EMBL AU063443 [ CGANCGGCGAGGTGGTGACGTTGGGCTCCGACG ACGTCGACGACNACGGTGGCTGCTTCCGTTG TGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ] [-] EMBL OSC103351 [ CGTTNGGCTCCGACGAACGTCGACGACGATGGTGGNTGCTTCCGTTTNTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGC GGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATNNGAGAACCCATCTCTNAT AGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGA ] consensusID : consensus_16236#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1278 fasta sequence [TTTTTTTTTTTTTTTTTTTAGTTTTTTACATATATATATATATATATCATA--CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATG] [-] EMBL AU100999 [TTTTTTTTTTTTTTTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTTCGGCGACNGGGTCTNGTTCANGAATGCCCAACTGCTTCGTGTCCACCAGCACTTGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGnc ] [+] EMBL CB658250 [ tcTTTTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTAC ] [-] EMBL AK099709 [ tgaTTTTTAGTTTTTTACATATATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGGCGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTACAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGAAATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAATTTGTTGCATGTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATG] [-] EMBL CB661899 [ ATATATATATATATCATA CATTAAGAAGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGAGAGACTAGAGAGAGTATATCCATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGC ] [+] EMBL CB666207 [ TATATATATATATCATACCCCTTA AAGGCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCTATATAGGACAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTC ] [+] EMBL CB665454 [ AGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCTGAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGTATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACTACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGCGTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTCGGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCTCCTCAACGCCAACGTGCAACGACTACTACTCATCTC CTGCGCGCGGCCGGGAGAGGCGGCGAGCGGCGAGATGTCGCCGGCGG ] consensusID : consensus_16236#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence [ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATA] [-] EMBL CF278294 [ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGCCCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATGTGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAACTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTCGTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTCGTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCAGCGAGCGGTTCCTCATCAGCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAATGATGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16236#0 AATCGAAAGTCCTTTATTTATATACAACACACACCTATTCCTTTCAACTTACGAACATGA 60 consensus_16236#2 -----------------------------------------------------------T 1 consensus_16236#1 -----------------------------------------------TTTTTTTTTTTTT 13 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 AAATCCAGTGGAT--GGTTTGGAAGGCTGGAAGAGTGAAGA-AGGTAT-ATACATTAAGA 116 consensus_16236#2 TTTTTTTTTTTTT--TTTTTAGTTTTTTACATATATATATATATATATCATACATTAAGA 59 consensus_16236#1 TAACAGGGCAAATGATTTTTAGTTTTTTACATATATATATATATATATCATACATTAAGA 73 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 AGTCACAGAACTACTCACACACACACACA--AAGTACAGTCTTAACACAATTAACTATCT 174 consensus_16236#2 AGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCT 119 consensus_16236#1 AGTCACAGAACTACTCACACACACACACACAAAGTACAGTCTTAACACAATTAACTATCT 133 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 234 consensus_16236#2 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 179 consensus_16236#1 ATATAGGAGAGACTAGAGAGAGTATATACATGAGCAGTATCTGTATTTACACGGAGAGCT 193 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 294 consensus_16236#2 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 239 consensus_16236#1 GAAGGATTAAAAGCTCTCGAACGCCGGCCCGATCCTATACACTTCTCTACTGCTCTTTGT 253 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTAC---AGAACACACT 351 consensus_16236#2 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACT 299 consensus_16236#1 ATAGTAATATTCTACACATACAAATTGCATGCGTACTTAACCACTACTACAGAACACACT 313 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 411 consensus_16236#2 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 359 consensus_16236#1 ACTCTCTTAGAGGATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 373 consensus_16236#3 -------------ATCAGGACGATGCAGAGCTGCAAAGCTAAGCTAGCTAGCTAACCAGC 47 *********************************************** consensus_16236#0 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 470 consensus_16236#2 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 418 consensus_16236#1 C-TAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 432 consensus_16236#3 CCTAAGTACTAACGTATATACGTACGTACATACGTACATGCATATGCATTCCCTGACATG 107 * ********************************************************** consensus_16236#0 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 530 consensus_16236#2 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 478 consensus_16236#1 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 492 consensus_16236#3 TGGCTAGCTATAACTAGCTGAGGCCTAGGCGTTGCCGGTGACGACCCGGGAGACGTGGAA 167 ************************************************************ consensus_16236#0 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 590 consensus_16236#2 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 538 consensus_16236#1 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 552 consensus_16236#3 CTGAACGCAGGCGTACGTCTGCGACTTGCCGAACATCTGCTGCTCCGGCGACGGCGTCTC 227 ************************************************************ consensus_16236#0 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 650 consensus_16236#2 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 598 consensus_16236#1 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 612 consensus_16236#3 GTTCAGGAATGCCCAGCTGCTCCGTGTCCACCAGCACTCGCTGCTGGTGCTGGCGACGTC 287 ************************************************************ consensus_16236#0 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 710 consensus_16236#2 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 658 consensus_16236#1 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGTCGCCGGC 672 consensus_16236#3 GTCGTCGTCGTCGTCATGATCGGCAGCGAACGACGACCGCTGATGACGATGGCTGCTTCC 347 **************************************************** ** * consensus_16236#0 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 770 consensus_16236#2 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 718 consensus_16236#1 GTGAGGAGCCGCCGGCGACGGCGGCTCGCTGTGGGAGTACGACTGGTACGGGTGATCGTC 732 consensus_16236#3 GT-------TGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGT--CAGCGAGCG-- 396 ** ** **** * * * *** ***** * ** ** consensus_16236#0 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 830 consensus_16236#2 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 778 consensus_16236#1 GGCCCTCGTCATGACGGTGCGCGCCAGCGGTGACGGCATGGAGTTCATCCTCTCCAGCCT 792 consensus_16236#3 GTTCCTCATCA-GCCGAACTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCA 455 * **** *** * ** * * * ** * * ****** consensus_16236#0 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 889 consensus_16236#2 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 837 consensus_16236#1 CCTCAACGCCAACGTGCAACGACTACTACTCATCTCCTGCTGCGCG-CGGCCGGGAGAGG 851 consensus_16236#3 TCAGAGAACCCATCTCTGATAGG-AGTATTCAATTCTCAGGTCGAGATGGACAAAGAAAG 514 * * ** * * * * ** *** ** ** * ** * * * consensus_16236#0 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 949 consensus_16236#2 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 897 consensus_16236#1 CGGCGAGCGGCGAGATGTCGCCGGCGGCGCGGGGTGATGCGAGCGGCGAGACGACGTTGG 911 consensus_16236#3 TGATGGATGA-GAAATGATGATA------------------------------------- 536 * * * ** *** * consensus_16236#0 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACG 1009 consensus_16236#2 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTG------------------- 938 consensus_16236#1 CGGCGGCGCGGGGAGAGGCGAGCGGCGAGGTGGTGGCGTTGGGCTCCGACGACGTCGACG 971 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 ACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 1069 consensus_16236#2 ----------------------CTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 976 consensus_16236#1 ACGACGGTGGCTGCTTCCGTTGCTGGCGCCTCCAGAACGCGTCCACCTCCTCCCTGGTCA 1031 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 GCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTA 1129 consensus_16236#2 GCGAGCGGTTCCTCATCAGCCGAACTATACTCAACAAAAACAGATCAAATTAATTAATTA 1036 consensus_16236#1 GCGAGCGGTTCCTCATCAGCCGAACTTTCTTCT-CATCACCAAG---AACTGGTGAGTTC 1087 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 CAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGA 1189 consensus_16236#2 CAGATCGATTGACCGATCAATACATATTGAATTATTTGTGTGGGTATATATAACTAAGGA 1096 consensus_16236#1 CAG---------CCAGCCATCAGAGAACCCATCTCTGATAGGAGTATTCAATTCTCAGGT 1138 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 AATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAAT--TTGTTGCAT 1247 consensus_16236#2 AATAATCTTCCCATTCAGTTCGTTATCGTCGATCGATCATATTGTTAAT--TTGTTGCAT 1154 consensus_16236#1 CGAGATGGACAAAGAAAGTG-ATGGATGAGAAATGATGATAGAGATGATGATCAGCCCCA 1197 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 GTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATC 1307 consensus_16236#2 GTACCTTTCTTCTCATCACCAAGAACTGGTGAGTTCCAGCCAGCCATCAGAGAACCCATC 1214 consensus_16236#1 GTGGATCTGTACCGTTTTATAGGCGCTCGCGCATACA---CATCCAGTGTTGGGGCTCGC 1254 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 TCTGATAGGAG-TATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAA 1366 consensus_16236#2 TCTGATAGGAG-TATTCAATTCTCAGGTCGAGATGGACAAAGAAAGTGATGGATGAGAAA 1273 consensus_16236#1 TCCACTAGGAGCTGATGGAGCAACAAGT-GAGCTGTAGCACACAGGT------------- 1300 consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 TGATGATAGAGATGATGATCAGCCCCAGTGGATCTGTACCGTTTTATAGGCGCTCGCGCA 1426 consensus_16236#2 TGATG------------------------------------------------------- 1278 consensus_16236#1 ------------------------------------------------------------ consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 TACACATCCAGTGTTGGGGCTCGCTCCACTAGGAGCTGATGGAGCAACAAGTGAGCTGTA 1486 consensus_16236#2 ------------------------------------------------------------ consensus_16236#1 ------------------------------------------------------------ consensus_16236#3 ------------------------------------------------------------ consensus_16236#0 GCACACAGGTTGAACTGAAAACCTGCGGCGTACGT 1521 consensus_16236#2 ----------------------------------- consensus_16236#1 ----------------------------------- consensus_16236#3 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||