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Oryza sativa
cluster # 16295 cluster # 16295       Sequences # 31       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16295#0 length = 1186 sequences # 5  
consensus_16295#1 length = 995 sequences # 1  
consensus_16295#2 length = 978 sequences # 4  
consensus_16295#3 length = 780 sequences # 17  
consensus_16295#4 length = 458 sequences # 2  
consensus_16295#5 length = 279 sequences # 2  

consensusID : consensus_16295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1186
fasta sequence
                              [ACACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCACCTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTCTCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCA-CCACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCG-CGGCTCCGCGGCGCCGCCGG-GC-TCGCACGCCAGCTCGGCCTGCAGCTCCCC-ACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCA-AGTACCTGGCTACCTGCTCCCATGTTTTAA-GGAGAAGAGTTGGATCTTGAAGTTTCAACCTCGTGGCAGTTGGCGCTCCCCCTCTCTTTCCCAGTACTTTCATACATGTTGCATGAATCCTATTTAAACGAATGTCTTGCATTCATGATTCATCCAACAACAACAACAGTCATATGGCGATGCCTGTTCTTTCTTTGGAAGTACGTAACCCGTGCCAACAGCCACATTTGATAAGTGAATTAAAAAGCTAATGAAGAATTGACCAGA]

[+] EMBL AK069038             [ACACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCACCTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTCTCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCA CCACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCG CGGCTCCGCGGCGCCGCCGG GC TCGCACGCCAGCTCGGCCTGCAGCTCCCC ACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCA AGTACCTGGCTACCTGCTCCCATGTTTTAA GGAGAAGAGTTGGATC                                                                                                                                                                                                                             ]
[+] EMBL AK060462             [ CACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCACCTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTCTCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCA CCACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCG CGGCTCCGCGGCGCCGCCGG GC TCGCACGCCAGCTCGGCCTGCAGCTCCCC ACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCA AGTACCTGGCTACCTGCTCCCATGTTTTAA GGAGAAGAGTTGGATCTTGAAGTTTCAACCTCGTGGCAGTTGGCGCTCCCCCTCTCTTTCCCAGTACTTTCATACATGTTGCATGAATCCTATTTAAACGAATGTCTTGCATTCATGATTCATCCAACAACAACAACAGTCATATGGCGATGCCTGTTCTTTCTTTGGAAGTACGTAACCCGTGCCAACAGCCACATTTGATAAGTGAATTAAAAAGCTAATGAAGAATTGACCAGA]
[+] EMBL OSS16315A            [                                                                                                                                                                                                                                           ACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCACCTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTCTCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCA CCACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGGGGCGCCGGCGCGNGGGCTCC NGGCG CGCCGGTGCTTCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU095973             [                                                                                                                                                                                                                                                                                                                                                                                               CTTCGTCTGGNTCTCCATCACCCACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGA GCGCTGCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCG CGGCTCCGCGGCGCCGCCGG GC TCGCACGCCAGCTCGGCCTGCAGCTCCCC ACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCA CTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGNTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCA AGTACCTGGCTACCTGCTCCCNTGTTTTAA GGAGAAGAGTTGGATCTTGAAGTTTCAACCTCGTGGCAGTTGGCGCTCaaaaaaaa                                                                                                                                                                                     ]
[+] EMBL BI806084             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGCAGCTCCCCGACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACGAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCACAGTACCTGGCTACCTGCTCCCATGTTTTAACGGAGAAGAGTTGGAT                                                                                                                                                                                                                              ]


>consensus_16295#0 ACACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCC ATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGC GCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCG GAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAAC GACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCAC CTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTC TCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCACCACCATCGTCGCCCAC CCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCG GACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGCCGCCGGGCTC GCACGCCAGCTCGGCCTGCAGCTCCCCACCGTCGCCGAGGCATGAGCTTCTGAGTTGGGA ATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACG CGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGT TATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGC CCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGA TGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATT TATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTT GGATCTTGAAGTTTCAACCTCGTGGCAGTTGGCGCTCCCCCTCTCTTTCCCAGTACTTTC ATACATGTTGCATGAATCCTATTTAAACGAATGTCTTGCATTCATGATTCATCCAACAAC AACAACAGTCATATGGCGATGCCTGTTCTTTCTTTGGAAGTACGTAACCCGTGCCAACAG CCACATTTGATAAGTGAATTAAAAAGCTAATGAAGAATTGACCAGA



consensusID : consensus_16295#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 995
fasta sequence
                              [AATTGATCACCAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGTATAGCTTCAGATACGAGCTGGTATTCGGTTTAATCCTGCTGATTAGGCAAGGTATTTGAATTGGAATTGTGCCTCTGATGTTAGTGCTAAGAGATGCGCTCTTGTTTAGTTCTTAGATATTGGCAGAATACTGATGTCTCGTATACGTGGTATCTCTGAAAATCAAAGCTGAGGCTGCTCTTAGGGGATGAATCCTTACAGGATTGTGCTTTTGCTGCTGCTTAGATGTTAGGATGCGTCATGGAACCACCAATTTGACCTTTGGCATTAGGATAGGAAGGTTTTGTTTTTCAATATTTTCAGCCGGTTATTCTTGATGTGATTAGGCGAGTAGCGTCCTCATGATGATCTTTGATCATGTGGGTCTGAATGGTTTTGGATTTTTGTTCGATCAAAGCTTGTTGGGTCAATGTCACCATCGTCATCAGCATATAGGCCCA]

[+] EMBL AK111313             [AATTGATCACCAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGTATAGCTTCAGATACGAGCTGGTATTCGGTTTAATCCTGCTGATTAGGCAAGGTATTTGAATTGGAATTGTGCCTCTGATGTTAGTGCTAAGAGATGCGCTCTTGTTTAGTTCTTAGATATTGGCAGAATACTGATGTCTCGTATACGTGGTATCTCTGAAAATCAAAGCTGAGGCTGCTCTTAGGGGATGAATCCTTACAGGATTGTGCTTTTGCTGCTGCTTAGATGTTAGGATGCGTCATGGAACCACCAATTTGACCTTTGGCATTAGGATAGGAAGGTTTTGTTTTTCAATATTTTCAGCCGGTTATTCTTGATGTGATTAGGCGAGTAGCGTCCTCATGATGATCTTTGATCATGTGGGTCTGAATGGTTTTGGATTTTTGTTCGATCAAAGCTTGTTGGGTCAATGTCACCATCGTCATCAGCATATAGGCCCA]


>consensus_16295#1 AATTGATCACCAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCT CCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGG CGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGG CCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGAT CCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAG CGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAA GCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGA GTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGC CTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCT CCCCGTGGCTGAGGTATAGCTTCAGATACGAGCTGGTATTCGGTTTAATCCTGCTGATTA GGCAAGGTATTTGAATTGGAATTGTGCCTCTGATGTTAGTGCTAAGAGATGCGCTCTTGT TTAGTTCTTAGATATTGGCAGAATACTGATGTCTCGTATACGTGGTATCTCTGAAAATCA AAGCTGAGGCTGCTCTTAGGGGATGAATCCTTACAGGATTGTGCTTTTGCTGCTGCTTAG ATGTTAGGATGCGTCATGGAACCACCAATTTGACCTTTGGCATTAGGATAGGAAGGTTTT GTTTTTCAATATTTTCAGCCGGTTATTCTTGATGTGATTAGGCGAGTAGCGTCCTCATGA TGATCTTTGATCATGTGGGTCTGAATGGTTTTGGATTTTTGTTCGATCAAAGCTTGTTGG GTCAATGTCACCATCGTCATCAGCATATAGGCCCA



consensusID : consensus_16295#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 978
fasta sequence
                              [AAAATTGATCACC-AAAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGAATCTTGAAGTTTCAACCTAAAAAAAAAANNAAAAANA]

[+] EMBL AK059787             [AAAATTGATCACC AAAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTATGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGAt                                    ]
[+] EMBL CA756245             [          ACCAAAAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCTGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGCTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCAC                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU094728             [                                                                                                                                                                                                                                                                                                                                      CGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCA CTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAA GTTTGCTGTTTA TGTGTACGTTTTGTGTGGTTA TTA TTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAA TACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGNATCTTGAA                             ]
[+] EMBL AU033202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGG ATCTTGAAGTTTCAACCTAAAAAAAAAANNAAAAANA]


>consensus_16295#2 AAAATTGATCACCAAAAAAAAAAAAAATCCCAAACTCCCCAACCGCCATGTCTCCTCAAG CTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGCGCCGCCTCCGCGGCCG GCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCGAAGTACGGCCTCCCCA GGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAGGCCACGGGGGAGTTCG AGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCACCTCGTCTACTACGAGA GGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTCTCCGGCATCCAGGCCA AGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCACCCGGACCAGGGCACCG TCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCGCAGTTCGACGCGGTGC CCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGCCGGGGTTATCCGGGAGCTTGGCC TGCTCCCCGTGGCTGAGGCATGAGCTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAG CACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTG TGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATG CTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAA GTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCA GTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGT ACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGAATCTTGAAGTTTCAACCTA AAAAAAAAANNAAAAANA



consensusID : consensus_16295#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 780
fasta sequence
                              [AGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG-GC-CACCTGCGCCA-CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC-GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC-TACATCT-GGTTCGGCTCCCACCTC-GCCTACTTCGAGGACGCCATCCGCGGCCGGATCGC-GTAC-G-GCACCATCACGGGGCTCTCC-GGGATCCAGGCGCAGAAG-TTCTTCGTCT-GGGTCTCCA-TC-ACC-ACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGG-CGGGGTTCATCTCCGAGGCGC-TG-CCGGAGTCGGAC-TTCGCCG-AGGTCCCCGT-CTG-CGGCGCCGGCGCGC-GGCTC-CGC-GGCGCCGCCG-GGC-TC-G-C-ACGCCA-G-CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG-CTTGTGTGTATGAG-TTGCTCCATGGCTTTCACTTT-TCACATGGTGACATACGCATGTGTGTGCCCATGCT-TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTCGTTCAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA]

[+] EMBL AK058266             [AGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGC CACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACATCT GGTTCGGCTCCCACCTC GCCTACTTCGAGGACGCCATCCGCGGCCGGATCGC GTAC G GCACCATCACGGGGCTCTCC GGGATCCAGGCGCAGAAG TTCTTCGTCT GGGTCTCCA TC ACC ACCATCGTCGCCCACCCCGACCAGGGCACCGCCGAGTTCCGGG CGGGGTTCATCTCCGAGGCGC TG CCGGAGTCGGAC TTCGCCG AGGTCCCCGT CTG CGGCGCCGGCGCGC GGCTC CGC GGCGCCGCCG GGC TC G C ACGCCA G CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATT                                                         ]
[+] EMBL OSC309               [       AAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GC CACCTGCGNCA CCTNCGCCACCGNCTCGGCCGCGCCGNTCCACGGCATAGCGAACGACCTNCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGN TACATCTGGGTTNGGCTTCCACCTCGGCCTACTTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS1962A             [             GACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GC CACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGA TTCGAGATCCGGCTGACGAGCACCTGCTTACATCT GGTTCGGCTTCCACCTC GGCTATTTCGAGGACGGCATTCGCGGNCGGATNGG TTACGG GCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS12813A            [              ACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTTTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GC CACCTGCGCCA CCTCCGCCACCGCNTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCNGGAGTACGGCCTCCTGNGGGGGCTGATCCng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS13575A            [              ACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GC CACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACATCT GGTTCGG TCCCACCTC GCCTACTTCGAGGACG CATCCGCGGCCGGATCGC GTAC G G ANCATCACGGGGNT TCC GGGATNCAGG GGAGAAG TTCTTCGTCT GGGTCT CA T  AAC AACATCGTCG CCA CCCGACCAGGG AACGTCGAGTTCCGGG CGGGGTT AT TTCGAGGCGT TG CC GAGT                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU065924             [               CACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTC G GC CACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCNGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCNGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACATCT GGTTCGG TTCCANCTN GCCTACTTCGAGGACG CATCCGCGGCCGGATCGng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU070431             [               CACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGNCGTCGG GCACACCTGCGNCA CCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS15574A            [               CACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTNTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GCACACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCNTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACATCT GGTTCGGCTCCCACCTC GCCTACTTCGAGGACGNCATNCGCGGCCGGNTCGC GTAC G GCANCATCACGGGGCTCTCC GGGATCCAGGCGCAGAAGTTTTTTCGTCTGGGGTNTTCATTCAACCAACCATNGTCGGCTAACC                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU163134             [                   ACCCACAGAAACCCAAACCCCNCAAAAAAGCCATGGCCATGTATCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTAGN GC CACCTGCGCCACCCTCCGACACCGACTNGGCCGCG GGNTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTNCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGTTGACGAGCACCTGnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU070337             [                    CCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG GC CACCTGCGCCA CCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACATCT GGTTCGGCTCCCACCTC GCCTACTTCGAGGACGCCATCCGCGGCCGGATCGC GTAC G GCACCATCACGGGGCTCTCC GGGATCCAGGCGCAGAAG TTCTTCGTCT GGGTCTCCA TC ACC                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM037753             [                                                                                                                                                                                                           GAGACGATCGCGTCCTACACCTTCGACAACGACAC GGGGGACTTCGAGATCCGGCTGACGAGCACCTGC TACAT T GGTTCGGCTCCCACCTC GCCTACTTCGAGGACGCCATCCGCGGCCGGATCGC GTAC GTGCACCATCACGGGGCTCTCC GGGATCCAGGCGCAGAAG TTCTTCGTCT GGGTCTCCA TCTACC ACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCCGGGGTTCATCTCCGAGGCGCGTGACCGGAGTCGGACATTCGCCG AGGTCCCCGT CTGACGGCGCCGGCGCGCAGGCTCTCGCAGGCGCCGCCG GGC TCTG C ACGCCA GTCTCGGCCTGCAGCTCCCCACCGTCCCCGAGGTATAGCTTATTAGACTTGTGTGTATGAGCTTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCTATGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCCCAATTTTCGTTCAAA                                               ]
[+] EMBL BE229495             [                                                                                                                                                                                                                              cgagCGACAACGACACGGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTTACATCT GGTTCGGCTCCCACCTCGGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGC GTAC G GCACCATCACGGGGCTCTCC GGGATCCAGGCGCAGAAG TTCTTCGTCT GGGTCTCCA TC ACC ACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGG CGGGGTTCATCTCCGAGGCGC TG CCGGAGTCGGAC TTCGCCG AGGTCCCCGT CTG MRGCGYCGGCGCGC GGCTC CGC GGCG CGCCGTGTC TC G C ACGGCA G YTCGG CTRCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTTYTCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATYATTTATTTTCCAAGCGAGGTCC                                                                                       ]
[+] EMBL AU162041             [                                                                                                                                                                                                                                                                        AGCACCTGC TACATCT GGTTCGGNTCCCACTTC GCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCNGTAC G GCACCATCACGGGGCTCTCCAGGGATCCAGGCGCAGAAG TTCTTCGTCT GGGTCTCCA TC ACC ACCATCGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGG CGGGGTTCATCTCCGAGGCGC TG CCGGAGTCGGAC TTCGCCG AGGTCCCCGT CTG CGGC    GCGC C GGGTC CGC GGCG CGCCG GGC TC G C ACGCCA G CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTCGTTCAAA                                               ]
[+] EMBL AU198146             [                                                                                                                                                                                                                                                                                                                                                                                                                           ACCATNGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGG CGGGGTTCATNTCCGAGGCGC TG CCGGAGTCGGAC TTNGCCG AGGTCCCCGT TTN CGGCGCCGGCGCGC GGCTC CGC GGCGCCGCCG GGC TN G C ACGCCA G CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTNGTTCAAAAAAAAAAAAAAA                                   ]
[+] EMBL AU097125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGAC TTCGCCGAAGGTCCCCGT CTG CG  GCNGACGC C GGGTC CGN GGCGCCGCCG GGC TC GNC ACGCCA G CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTCGTTCAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA]
[+] EMBL AU096843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGAC TTCGCCG AGGTCCCCGTNNTG CGGC     NGCGC GGGTC CGN GGCGTCGCCG GGCTTC G CNACGCCATG CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTCGTTCAAAAA                                             ]
[+] EMBL AU198232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGCGC GGCTC CGT GGGGCCGCCG GGN TT G C ACGCCA G CTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAG CTTGTGTGTATGAG TTGCTCCATGGCTTTCACTTT TCACATGGTGACATACGCATGTGTGTGCCCATGCT TGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAAATTTTCGTTCAAAAAAA                                           ]


>consensus_16295#3 AGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATG TCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGGCCACCTGCGCCACCTCCG CCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCC TCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGG ACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCACCTCGCCTACT TCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTCTCCGGGATCC AGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCACCACCATCGTCGCCCACCCCGACCAGG GCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCGGACTTCGCCG AGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGCCGCCGGGCTCGCACGCCAGC TCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTATTAGCTTGTGTGTATGAGTTG CTCCATGGCTTTCACTTTTCACATGGTGACATACGCATGTGTGTGCCCATGCTTGGTTGC CCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTTCCGGCAATAAAATCCATCAAA ATTTTCGTTCAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA



consensusID : consensus_16295#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 458
fasta sequence
                              [GCGCGCCGGCTCTCTGCTCCGCTTCTTGCCGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGTCTTCTGAGTTGGGAAT-GACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAAAAAAAAAAAAAAA]

[+] EMBL AA750814             [GCGCGCCGGCTCTCTGCTCCGCTTCTTGCCGGGTTATCCGGGAGCTTGGCCTGCTCCCCGTGGCTGAGGCATGAGTCTTCTGAGTTGGGAAT GACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA998215             [                                                     CTCCCCGTGGCTGAGGCATGAG CTTCTGAGTTGGGAATCGACCTGCAGCAAACTTGAGCACCTCCGGTTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTTTGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTACCTGCTCCCATGTTTTAAGGAGAAAAAAAAAAAAAAAA]


>consensus_16295#4 GCGCGCCGGCTCTCTGCTCCGCTTCTTGCCGGGTTATCCGGGAGCTTGGCCTGCTCCCCG TGGCTGAGGCATGAGTCTTCTGAGTTGGGAATGACCTGCAGCAAACTTGAGCACCTCCGG TTCGATGTTGTTACAAAATAAAGAAGACGCGCCCTTGAGCTCAGGAGGCTGTGCAAGGTT TGCTGTTTAGTGTGTACGTTTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACA AGTCTAAGATCAATATATTTCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCG TGTTGTCGTCGGATTCATGTGAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATT TGCATGGAACTTCATATATGTAGTGTATTTATGTGTATGTAAATGGCAAGTACCTGGCTA CCTGCTCCCATGTTTTAAGGAGAAAAAAAAAAAAAAAA



consensusID : consensus_16295#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 279
fasta sequence
                              [CNGNNACGCGTGGGGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGNCGCCGTCGGGC-CACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGNCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATC]

[+] EMBL OSS14402A            [CNGNNACGCGTGGGGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGNCGCCGTCGGGC CACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGNCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATC]
[+] EMBL OSS16317A            [                                                                ccgcaaccaACCACCATCCTCCTCCTCGCCGCCGCCGTCGGGCTTACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGNCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGATGATCGCNTNCTACACCTTCGACAACNACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGTTACATC]


>consensus_16295#5 CNGNNACGCGTGGGGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCCATGGC CATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGNCGCCGTCGGGCCACCTGCGCCACC TCCGCCACCGCCTCGGCCGCGNCGCTCCACGGCATAGCGAACGACCTCCTCCCGGAGTAC GGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAACGACACG GGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      ----------------AAAATTGATCACCAAAAAAAAAAAAAATCCCAAACTCCCCAACC 44
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      ACACATAGGAGATAGAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAAAAAGCC 60
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      GCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTCGTCGCCGGC 104
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      ATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGGCGCCACCTGC 120
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      GCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGACCTCCTCCCG 164
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      GCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGACCTCCTCCCG 180
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      AAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGCTTCGACGAG 224
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      GAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACCTTCGACAAC 240
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      GCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTCGGCTCCCAC 284
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      GACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTCGGCTCCCAC 300
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      ------------------------------------------------------------
consensus_16295#2      CTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATCTCCGACCTC 344
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      CTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATCACGGGGCTC 360
                                                                                   

consensus_16295#3      ------------AGATA---GAAAAGGTGACACAACCCACAGAAACCCAAACCCCCCAAA 45
consensus_16295#5      -----------CNGNNACGCGTGGGGGTGACACAACCCACAGAAACCCAAACCCCCCAAA 49
consensus_16295#1      ---------------------AATTGATCACCAAAAAAAAAAAATCCCAAACTCCCCAA- 38
consensus_16295#2      TCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCGTCACCGGGATCGTCGCGCAC 404
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      TCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCATCACCACCATCGTCGCCCAC 420
                                                                                   

consensus_16295#3      AAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGCCGCCGTCGG---- 101
consensus_16295#5      AAAGCCATGGCCATGTCTCCTCTCACCACCATCCTCCTCCTCGCCGNCGCCGTCGG---- 105
consensus_16295#1      -------CCGCCATGTCTCCTCAAGCTCTCCTCCTCGCCGCCGCCGCCGCCGCCATCGTC 91
consensus_16295#2      CCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCTCCCGGCGTCG 464
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      CCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCTGCCGGAGTCG 480
                                                                                   

consensus_16295#3      GCCACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGCCGCTCCACGGCATAGCGAACGAC 161
consensus_16295#5      GCCACCTGCGCCACCTCCGCCACCGCCTCGGCCGCGNCGCTCCACGGCATAGCGAACGAC 165
consensus_16295#1      GTCGCCGGCGCCGCCTCCGCGGCCGGCGGCGGCGTCCAGCCGAACGGCGCGGCGAACGAC 151
consensus_16295#2      CAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGCTGC---CGGG 521
consensus_16295#4      ----------------------GCG-CGCCGGCTCTCTGCTCCGCTTC-TTGC---CGGG 33
consensus_16295#0      GACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGCCGC---CGGG 537
                                              ** *   * *     **    *  *   **   **  

consensus_16295#3      CTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACC 221
consensus_16295#5      CTCCTCCCGGAGTACGGCCTCCCGCGGGGGCTGATCCCGGAGACGATCGCGTCCTACACC 225
consensus_16295#1      CTCCTCCCGAAGTACGGCCTCCCCAGGGGCCTCATCCCGGACTCCGTAGCCTCCTACAGC 211
consensus_16295#2      GTTATCCGGGAGCTTGGCCTGC------TCCCCGTGGCTGAGGCATGAG-CTTCTG-AGT 573
consensus_16295#4      -TTATCCGGGAGCTTGGCCTGC------TCCCCGTGGCTGAGGCATGAGTCTTCTG-AGT 85
consensus_16295#0      CTCGCACGCCAGCTCGGCCTGCAGCTCCCCACCGTCGCCGAGGCATGAG-CTTCTG-AGT 595
                        *    *   **   ***** *            *  * **  *    *  * **  *  

consensus_16295#3      TTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATCTGGTTC 281
consensus_16295#5      TTCGACAACGACACGGGGGACTTCGAGATCCGGCTGACGAGCACCTGCTACATC------ 279
consensus_16295#1      TTCGACGAGGCCACGGGGGAGTTCGAGATCCACCTGGCGGGGACCTGCTACGTCTGGTTC 271
consensus_16295#2      TGGGAATCGACCTGCAGCAAACTTGAGCACC-TCCGGTTCGATGTTGTTACA--AAATAA 630
consensus_16295#4      TGGGAAT-GACCTGCAGCAAACTTGAGCACC-TCCGGTTCGATGTTGTTACA--AAATAA 141
consensus_16295#0      TGGGAATCGACCTGCAGCAAACTTGAGCACC-TCCGGTTCGATGTTGTTACA--AAATAA 652
                       *  **      *    *  *  * ***  **  * *    *    ** ***         

consensus_16295#3      GGCTCCCACCTCGCCTACTTCGAGGACGCCATCCGCGGCCGGATCGCGTACGGCACCATC 341
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      GGCTCCCACCTCGTCTACTACGAGAGGAGCGTCCGCGGCCGCCTCTCGTACGGCGCCATC 331
consensus_16295#2      AGAAGACGCGCCCTTGAGCTC-AGGAGGCTGTGCAAGGTTTGCTGTT-TAGTGTGTACGT 688
consensus_16295#4      AGAAGACGCGCCCTTGAGCTC-AGGAGGCTGTGCAAGGTTTGCTGTT-TAGTGTGTACGT 199
consensus_16295#0      AGAAGACGCGCCCTTGAGCTC-AGGAGGCTGTGCAAGGTTTGCTGTT-TAGTGTGTACGT 710
                                                                                   

consensus_16295#3      ACGGGGCTCTCCGGGATCCAGGCGCAGAAGTTCTTCGTCTGGGTCTCCA-TCACCACCAT 400
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      TCCGACCTCTCCGGCATCCAGGCCAAGAAGCTCTTCCTCTGGGTCTCCG-TCACCGGGAT 390
consensus_16295#2      TTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATT 748
consensus_16295#4      TTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATT 259
consensus_16295#0      TTTGTGTGGTTATTTATTTATGAACATGGATGCTATCCACAAGTCTAAGATCAATATATT 770
                                                                                   

consensus_16295#3      CGTCGCCCACCCCGACCAGGGCACCGTCGAGTTCCGGGCGGGGTTCATCTCCGAGGCGCT 460
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      CGTCGCGCACCCGGACCAGGGCACCGTCGAGTTCCAGGTCGGCTTCGTCTCCGAGGCGCT 450
consensus_16295#2      TCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTT-GTCGTCGGATTCAT 807
consensus_16295#4      TCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTT-GTCGTCGGATTCAT 318
consensus_16295#0      TCTACCGCGCCCGGGTAGAGCTATAGATTAAAGTCGGACCGTGTT-GTCGTCGGATTCAT 829
                                                                                   

consensus_16295#3      GCCGGAGTCGGACTTCGCCGAGGTCCCCGTCTGCGGCGCCGGCGCGCGGCTCCGCGGCGC 520
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      CCCGGCGTCGCAGTTCGACGCGGTGCCCGCCTGCGGCGCCGGCGCGCAGCTCCGCGGCGC 510
consensus_16295#2      GT--GAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCA------TGGAAC 859
consensus_16295#4      GT--GAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCA------TGGAAC 370
consensus_16295#0      GT--GAGTTCTGATGGCATAGGGGGTCCGAATGCAGTGAAAATTTGCA------TGGAAC 881
                                                                                   

consensus_16295#3      CGCCGGGCTCGCACGCCAGCTCGGCCTGCAGCTCCCCACCGTCGCCGAGGTATAGCTTAT 580
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      TGCCGGGGTTATCCGGGAGCTTGGCCTGC------TCCCCGTGGCTGAGGTATAGCTT-- 562
consensus_16295#2      TTC---ATATATGTAGTGTATTTATGTGTA---------TGTAAATGGCAAGTACCTG-- 905
consensus_16295#4      TTC---ATATATGTAGTGTATTTATGTGTA---------TGTAAATGGCAAGTACCTG-- 416
consensus_16295#0      TTC---ATATATGTAGTGTATTTATGTGTA---------TGTAAATGGCAAGTACCTG-- 927
                                                                                   

consensus_16295#3      TAGCTTGTGTGTATGAGTTGCTCCATGGCTTTCACTT-TTCACATGGTGACATACGCATG 639
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      -------CAGATACGAGCTGGTATTCGGTTTAATCCTGCTGATTAGGCAAGGTATTTGAA 615
consensus_16295#2      ------------GCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGAATCTTGAAGTTT 953
consensus_16295#4      ------------GCTACCTGCTCCCATGTTTTAAGGAGAAAAAAAAAAAAAAAA------ 458
consensus_16295#0      ------------GCTACCTGCTCCCATGTTTTAAGGAGAAGAGTTGGATCTTGAAGTTTC 975
                                                                                   

consensus_16295#3      TGTGTGCCCATGCTTGGTTGCCCATGTCAATCATTTATTTTCCAAGCGAGGTCCTCATTT 699
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      TTGGAATTGTGCCTCTGATGTTAGTGCTAAG-AGATGCGCTCTTGTTTAGTTCTTAGATA 674
consensus_16295#2      CAACCTAAAAAAAAAANNAAAAANA----------------------------------- 978
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      AACCTCGTGGCAGTTGGCGCTCCCCCTCTCTTTCCCAGTACTTTCATACATGTTGCATGA 1035
                                                                                   

consensus_16295#3      CCGGCAATAAA---ATCCATCAAAATTTTCGTTCAAAAAAAAAAAAAAACAAAAAAAAAA 756
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      TTGGCAGAATACTGATGTCTCGTATACGTGGTATCTCTGAAAATCAAAGCTGAGGCTGCT 734
consensus_16295#2      ------------------------------------------------------------
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      ATCCTATTTAAACGAATGTCTTGCATTCATGATTCATCCAACAACAACAACAGTCATATG 1095
                                                                                   

consensus_16295#3      AAAAAAAAAAACAAAAAAAAAAAA------------------------------------ 780
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      CTTAGGGGATGAATCCTTACAGGATTGTGCTTTTGCTGCTGCTTAGATGTTAGGATGCGT 794
consensus_16295#2      ------------------------------------------------------------
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      GCGATGCCTGTTCTTTCTTTGGAAGTACGTAACCCGTGCCAACAGCCACATTTGATAAGT 1155
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      CATGGAACCACCAATTTGACCTTTGGCATTAGGATAGGAAGGTTTTGTTTTTCAATATTT 854
consensus_16295#2      ------------------------------------------------------------
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      GAATTAAAAAGCTAATGAAGAATTGACCAGA----------------------------- 1186
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      TCAGCCGGTTATTCTTGATGTGATTAGGCGAGTAGCGTCCTCATGATGATCTTTGATCAT 914
consensus_16295#2      ------------------------------------------------------------
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      ------------------------------------------------------------
                                                                                   

consensus_16295#3      ------------------------------------------------------------
consensus_16295#5      ------------------------------------------------------------
consensus_16295#1      GTGGGTCTGAATGGTTTTGGATTTTTGTTCGATCAAAGCTTGTTGGGTCAATGTCACCAT 974
consensus_16295#2      ------------------------------------------------------------
consensus_16295#4      ------------------------------------------------------------
consensus_16295#0      ------------------------------------------------------------
                                                                                   

consensus_16295#3      ---------------------
consensus_16295#5      ---------------------
consensus_16295#1      CGTCATCAGCATATAGGCCCA 995
consensus_16295#2      ---------------------
consensus_16295#4      ---------------------
consensus_16295#0      ---------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)