Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 16340 cluster # 16340       Sequences # 32       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16340#0 length = 1030 sequences # 19  
consensus_16340#1 length = 567 sequences # 9  
consensus_16340#2 length = 433 sequences # 1  
consensus_16340#3 length = 421 sequences # 1  
consensus_16340#4 length = 296 sequences # 1  
consensus_16340#5 length = 84 sequences # 1  

consensusID : consensus_16340#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1030
fasta sequence
                              [TATAAACCACGCCGCCNGCCACNGCCGCTCGCCATCGCCACC-GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT---GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG-GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA-GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG-CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA-TTTTTTCTTCTGAATATTGATACCCTTAAGTCATAATAACATCTTTGTGGCAAAAAAAAAAGA]

[+] EMBL OS0108A              [TATAAACCACGCCGCCNGCCACNGCCGCTCGCCATCGCCACC GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTNTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCG CAGACG GGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGNCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGaac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB643057             [ ATAAACCACGCCGCCCGCCACCGCCGCTCGCCATCGCCACCTGTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGA                                                                                                                                                                                                                                                        ]
[+] EMBL AK067802             [                                         C GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAG                                                                                                                                                                        ]
[+] EMBL AK104251             [                                           GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAG   GCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAAT                                                                           ]
[+] EMBL AK061214             [                                           GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA TTTTTTCTTCTGAATATTGATACCCTTAAGTCATAATAACAT                     ]
[+] EMBL AK061387             [                                           GTCGTTCACACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAG   GCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA TTTTTTCTT                                                      ]
[+] EMBL CF323588             [                                                    ACCACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU075478             [                                                      CACACCACCTGCTGCACACAGCTCGATCGAGTTAGCCCACNAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAGNGCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCANGTCGCTCGGCCTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB645678             [                                                                                 CGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCCCGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCAGAGGCAGCGCCTTACTCCGCGCTGCAAAGCGAATGCCAGCATGACTTCACTAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGATGAGGCGCCGTCGTCAACGTGCTGCGGCGACATGTCTGAGACTCAACAC GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GACGCTCGGCCTCCGATTCGACCGCCTCCTCACCATGCCCACCGGCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAATCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTT                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB967195             [                                                                                                                          GTAT GCCGCCTGG GCGGTCT GCGTTGGC TCCGTGTTGGCGT GTGCGTGTCGGCGGCGTCGGCGTCGGCGCCAGACGCGGCGCTGCAGAGCAAGTGCCAGCAGTACTTCTCGAAGCTGACGGACTGCATGGACTACGCGTCGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGTTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTGTTTTGTACCCTGAT AATAGATTTGAGACTTGATTTTTGTgccgctc                                                                                                                                                    ]
[-] EMBL CB645679             [                                                                                                                                             TCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGT   GGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTT AAAGGTGATAAATAGATTTGAGACT                                                                                                                                                                     ]
[-] EMBL CB643058             [                                                                                                                                                                                                                                      ACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGATTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA TTTTTTCTTCTGAATATTGATACCCTTAAGTCATAATAACATCTTTGTGGCAAAAAAAAAAGA]
[+] EMBL AU065520             [                                                                                                                                                                                                                                                            CATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAG GCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTG CAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAG TTTTACTCTGCAACAAAC                                                                                                                                                                                                                                                                              ]
[+] EMBL C73234               [                                                                                                                                                                                                                                                                                          GCCGTCGTCGACGTGCTGCGGCGACATGTCGGCNACGCAGCAG GCGCGGCCCGATTNCNTGTCCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCA GTNGCTCGGCCTCCGCTTCGACCGCNTCCTCGCNATGCCCACCGCCTGNAAANCTCCCCAACGCCAACNTTTCCCTCTGCATCAACCTGCTGCACCTNACCCCAAGCTCACCGGACTACGCTGTNTTCGCCAACGNCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCG CGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTTTGCGGTTTTCTAATCCATCTTCTGATCCGTGAAA AAGCTAGT AACCA CCATTTTTTTT                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU075479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTaaaaaa                                                                                                                                                    ]
[+] EMBL AU093198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAANCTTNTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA TTTTTTCTTCTGAATATTGATACCCTTAAGTTAAAAAAAaaa                     ]
[+] EMBL CF330586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCATTTTTTTCTTCTGAAaaaaaaaa                                         ]
[-] EMBL CF330587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTTCAGCTTTTACTCTGCAAGAAACGAATGCACCCTGGATGGATGGATGGATGGTTGGTTTGTAAAAAAAAACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCAAAAAAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCATTTTTTTCTTGTGAATAaaaaaaa                                        ]
[+] EMBL AU093613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCA TTTTTTCTTCTGAATATTGATACCCTTAAGTC                               ]


>consensus_16340#0 TATAAACCACGCCGCCNGCCACNGCCGCTCGCCATCGCCACCGTCGTTCACACCACACCA CCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGA GGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGTGGCGGCG GCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTG ACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGC GACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTG CACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATG CCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTG ACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCAGCGGCTACGACG CCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCG GGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTC TGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGAT GGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTGATGTTGTACTCTTTT GTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTGGCTTGATGCTAGCTA GCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATG TACCTCATTTTTTCTTCTGAATATTGATACCCTTAAGTCATAATAACATCTTTGTGGCAA AAAAAAAAGA



consensusID : consensus_16340#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 567
fasta sequence
                              [TACATCATCCAGCAGGTGCACGGCGGCCGGACCTAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAAC-C-TGCTGCACCTGACCCCAAGCTCACCGGAC-TACGCTGTCTTCGCCAACGCCTCCAAGG-CAG-CGGCT-ACGACGCCGT-CAAGCACCACC-CCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA-GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC-TCTTGATCTCTAC-GTCGTTCA-GCTTTTACT-CTGCAAGAAA-CGAATGCACAC-T-GGATG-GATGGATGGAT-GGTTGGTTTGTGATGTGCTACAC-GAAGATTCG-TTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB000331             [TACATCATCCAGCAGGTGCACGGCGGCCGGACCTAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAAC C TGCTGCACCTGACCCCAAGCTCACCGGAC TACGCTGTCTTCGCCAACGCCTCCAAGG CAG CGGCT ACGACGCCGT CAAGCACCACC CCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAAAAAAA                          ]
[+] EMBL AU172670             [                                                                                                       CCAACGTCTCCCTCTGCATCAAC C TGCTGCACCTGACCCCAAGCTCACCGGAC TACGCTGTCTTCGCCAACGCCTCCAAGG CAG CGGCT ACGACGCCGT CAAGCACCACC CCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAA                               ]
[-] EMBL CB965344             [                                                                                                                        ATCAACTCTTTTTTCACCTGACTCCAAGCTCACCTGTT TACTCTGTCTTCGCCAACGCCTCCAAGG CAT CGGCT ACGACTCCGTGCAAGCACCACCTCCGGGGGCGGCGGCGGCCACCGCCGTCGGTTTCAAGGTTCAGTCGGGGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACTGCTGCAAGAAA CGAATGCACAC TGGGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCGTTTCTGATGTTGTACTGTTTTGTACCCTGATAAATAGATTTGAGACTT                                          ]
[+] EMBL AU029926             [                                                                                                                                   cgtccgCTGACCCCAAGCTCACCGGACTTACGCTGTCTTCGCCAACGCCTCCAAGGCCAGCCGGCTAACGACGCCGT CAAGCACCACC CCGGGGGCGGCGGCGGCCACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB966244             [                                                                                                                                         tTGACCCCAATCTCACCGTAT TACGCTGTCTTTGCCTACGCCTCCTAGT CAT CGGCT ACGACTCCGT CAAGCACCACC CCGGGGGCGGCGGCGGCCACCGCCGTCGGTTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTGTTTTGTACCCTGATAAATAGATTTGAGACTT                                          ]
[-] EMBL CB966225             [                                                                                                                                                                                                                        CACC CCGGGGTCGGCGTCGGCCACCGCCGGCGGTTTCAAGGTTCAGTCGGGGCTCAGCTACGGCGTCGTCTCGTCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGGTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTGTTTTGTACACTGATAAATAGATTTGAGACTT                                          ]
[-] EMBL CB967456             [                                                                                                                                                                                                                                                                           GGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTA GTCACCCACCC TTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTTTACT CTGC AGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGAT                                                                                             ]
[+] EMBL C97912               [                                                                                                                                                                                                                                                                                                                                  CTTNTGATCCGTGAAACAAGNTA GTCACCCACCCATTTTTCTTTGGGAAAAAATCTTTTCTGTC TCTTGATCTCTAC GTCGTTCA GCTTNTACT CTGCAAGAAA CGAATGCACAC T GGATG GATGGATGGAT GGTTGGTTTGTGATGTGCTACAC GAAGATTCG TTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTANAAAAAAAAA                     ]
[-] EMBL CB964670             [                                                                                                                                                                                                                                                                                                                                                                                           gTTCTGTCGTCTTGATCTCTACAGTCGTTCACGCTTTTACTGCTGCAAGAAAGCGAATGCACACGT GGATGNGATGGATGGATNGGTTGGTTTGTGATGTGCTACACAGAAGATTCG TTCTGATGTTGTACTGTTTTGTAGCCTGATAAATAGATTTGAGACTT                                          ]


>consensus_16340#1 TACATCATCCAGCAGGTGCACGGCGGCCGGACCTAGGTCCAGTCGCTCGGCCTCCGCTTC GACCGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGC ATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCC AAGGCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGC GGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCC GTCTTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGG GAAAAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACG AATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTT CTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16340#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence
                              [ATCATCCAGAAGGTGNACGGCGGCCGNAACGAGGTCAAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCNATGCCCACCGCCTGAAAGCTCCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCGGCTACGACGCCNTCAAGCACCACCCCGGGGGCGGCGGCGGCCAACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGNNATGGTTTCTGCCGTCTTCTCATCCATCTTNTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTNTTTGGGAAAAAATNTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACAGAAAAGATTTTTTCCCA]

[-] EMBL AU065833             [ATCATCCAGAAGGTGNACGGCGGCCGNAACGAGGTCAAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCNATGCCCACCGCCTGAAAGCTCCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAGGCGGCTACGACGCCNTCAAGCACCACCCCGGGGGCGGCGGCGGCCAACCGCCGGCGGCTTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGNNATGGTTTCTGCCGTCTTCTCATCCATCTTNTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTNTTTGGGAAAAAATNTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACAGAAAAGATTTTTTCCCA]


>consensus_16340#2 ATCATCCAGAAGGTGNACGGCGGCCGNAACGAGGTCAAGTCGCTCGGCCTCCGCTTCGAC CGCCTCCTCGCNATGCCCACCGCCTGAAAGCTCCCCCAACGCCAACGTCTCCCTCTGCAT CAACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAA GGCGGCTACGACGCCNTCAAGCACCACCCCGGGGGCGGCGGCGGCCAACCGCCGGCGGCT TCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGNNATGGTTTCTGCCGTCT TCTCATCCATCTTNTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTNTTTGGGAAA AAATNTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACAGAAA AGATTTTTTCCCA



consensusID : consensus_16340#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 421
fasta sequence
                              [CACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGTGGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAGTAACCACCTCCT]

[+] EMBL CB641248             [CACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGAGAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGTGGCGGCGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCGGCGACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAGTAACCACCTCCT]


>consensus_16340#3 CACCTGCTGCACACAGCTCGATCGAGTTAGCCCACTAGCTACCAACCAAGCTGCCGGCGA GAGGTATGGCGGCGTGGCGCGGTCTGGCGTTGGCAGCGGTGGTGGCGTGGTGCGTGGCGG CGGCGGCGGCGGCGCCAGACGCGGCGCTGCAGAGCAAATGCCAGCAGGACTTCACGAAGC TGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTCGACGTGCTGCG GCGACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGTGCTACATCATCCAGCAGG TGCACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCTCGCCA TGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATCAGTAACCACCTCC T



consensusID : consensus_16340#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 296
fasta sequence
                              [TTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGANTCGNTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGGTCNTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCATTTTTTCTTCTNAAAAAAAAAAAAAAAAAAAAAAAAAAANA]

[+] EMBL AU067931             [TTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGANTCGNTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGGTCNTCTGTGGCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCATTTTTTCTTCTNAAAAAAAAAAAAAAAAAAAAAAAAAAANA]


>consensus_16340#4 TTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAATGCACACT GGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGANTCGNTCTGATGTTGT ACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGGTCNTCTGTGGCTTGAT GCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCTGAATAAT CAATAATGTACCTCATTTTTTCTTCTNAAAAAAAAAAAAAAAAAAAAAAAAAAANA



consensusID : consensus_16340#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 84
fasta sequence
                              [AAGTCTCAAATCTATTTATCAGTGGTACAAGAACAGTACAACGATCGAGAACGAATCTTACGTGTAGCACATCACAAGACGCAA]

[+] EMBL CB966976             [AAGTCTCAAATCTATTTATCAGTGGTACAAGAACAGTACAACGATCGAGAACGAATCTTACGTGTAGCACATCACAAGACGCAA]


>consensus_16340#5 AAGTCTCAAATCTATTTATCAGTGGTACAAGAACAGTACAACGATCGAGAACGAATCTTA CGTGTAGCACATCACAAGACGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16340#0      TATAAACCACGCCGCCNGCCACNGCCGCTCGCCATCGCCACCGTCGTTCACACCACACCA 60
consensus_16340#3      ----------------------------------------------------------CA 2
consensus_16340#1      -------------------------------------------------TACATCATCCA 11
consensus_16340#2      ----------------------------------------------------ATCATCCA 8
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      CCTGCTGCACA-CAGCTCGATCGAGTT--AGCCCACTAGCTACCAACCAAGCTGCCGGC- 116
consensus_16340#3      CCTGCTGCACA-CAGCTCGATCGAGTT--AGCCCACTAGCTACCAACCAAGCTGCCGGC- 58
consensus_16340#1      GCAGGTGCACGGCGGCCGGACCTAGGTCCAGTCGCTCGGCCTCCGCTTCGACCGCCTCCT 71
consensus_16340#2      GAAGGTGNACGGCGGCCGNAACGAGGTCAAGTCGCTCGGCCTCCGCTTCGACCGCCTCCT 68
consensus_16340#4      -------------------------TTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTT- 34
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      -GAGAGGTATGGCGGCGTGGCGCGGTCT-GGCGTTGGCAGCGGTGGTGGCGT-GGTGCGT 173
consensus_16340#3      -GAGAGGTATGGCGGCGTGGCGCGGTCT-GGCGTTGGCAGCGGTGGTGGCGT-GGTGCGT 115
consensus_16340#1      CGCCATGCCCACCGCCTGCAAGCTCCCC-AACGCCAACGTCTCCCTCTGCATCAACCTGC 130
consensus_16340#2      CGCNATGCCCACCGCCTGAAAGCTCCCCCAACGCCAACGTCTCCCTCTGCATCAACCTGC 128
consensus_16340#4      --TACTCTGCAAGAAACGAATGCACACTGGATGGATGGATGGATGGTTGGTT---TGTGA 89
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GGCGGC-GGCGGCGGCGGCGCCAGACGCGGCGCTG-CAGAGCAAATGCCAGCAGGACT-- 229
consensus_16340#3      GGCGGC-GGCGGCGGCGGCGCCAGACGCGGCGCTG-CAGAGCAAATGCCAGCAGGACT-- 171
consensus_16340#1      TGCACCTGACCCCAAGCTCACCGGAC--TACGCTGTCTTCGCCAACGCCTCCAAGGCAGC 188
consensus_16340#2      TGCACCTGACCCCAAGCTCACCGGAC--TACGCTGTCTTCGCCAACGCCTCCAAGGC--- 183
consensus_16340#4      TGTGCTACACGAAGANTCGNTCTGATGTTGTACTCTTTTGTACCCTGATAAATAGATT-- 147
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      --TCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTC 287
consensus_16340#3      --TCACGAAGCTGACGGACTGCATGGACTACGCGACGGGGCACGAGGAGGCGCCGTCGTC 229
consensus_16340#1      GGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCG-GCCA-CCGCCGGCGGCTTC 246
consensus_16340#2      GGCTACGACGCCNTCAAGCACCACCCCGGGGGCGGCGGCG-GCCAACCGCCGGCGGCTTC 242
consensus_16340#4      -----TGAGACTT---GATTTTTGGTCNTCTGTGGCTTGATGCTAGCTAGCTACATTCTG 199
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GACGTGCTGCGGCG-ACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGT-GCTAC 345
consensus_16340#3      GACGTGCTGCGGCG-ACATGTCGGCGACGCAGCAGGCGCGGCCCGAGTGCCTGT-GCTAC 287
consensus_16340#1      AAGGTTCAGGCGGG-GCTCAGCTACGGCGTCGTCTCGGCGGCGATGGTTTCTGCCGTCTT 305
consensus_16340#2      AAGGTTCAGGCGGG-GCTCAGCTACGGCGTCGTCGCGGCGGNNATGGTTTCTGCCGTCTT 301
consensus_16340#4      AATACTGATACACGCATATGCTAGTACTAAATCTGAATAATCAATAATGTACCTCATTTT 259
consensus_16340#5      AAGTCTCAAATCTA--TTTATCAGTGGTACAAGAACAGTACAACGATCGAGAACGAATCT 58
                        *                                                          

consensus_16340#0      ATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGAC 405
consensus_16340#3      ATCATCCAGCAGGTGCACGGCGGCCGGAACGAGGTCCAGTCGCTCGGCCTCCGCTTCGAC 347
consensus_16340#1      CTCATCCATCTTCTGATCCGTGAAACAAGCTAG--TCACCCACCCATTTTTCTTTGGGAA 363
consensus_16340#2      CTCATCCATCTTNTGATCCGTGAAACAAGCTAG--TCACCCACCCATTTTTNTTTGGGAA 359
consensus_16340#4      TTCTTCTNAAAAAAAAAAAAAAAAAAAAAAAAAAANA----------------------- 296
consensus_16340#5      TACGTGTAGCACATCACAAGACGCAA---------------------------------- 84
                         * *                                                       

consensus_16340#0      CGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATC 465
consensus_16340#3      CGCCTCCTCGCCATGCCCACCGCCTGCAAGCTCCCCAACGCCAACGTCTCCCTCTGCATC 407
consensus_16340#1      AAAATCTTTTCTGT-CTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAA 422
consensus_16340#2      AAAATNTTTTCTGT-CTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACAGA 418
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      AACCTGCTGCACCTGACCCCAAGCTCACCGGACTACGCTGTCTTCGCCAACGCCTCCAAG 525
consensus_16340#3      AGTAACCACCTCCT---------------------------------------------- 421
consensus_16340#1      TGCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCT 482
consensus_16340#2      AAAGATTTTTTCCCA--------------------------------------------- 433
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GCAGCGGCTACGACGCCGTCAAGCACCACCCCGGGGGCGGCGGCGGCCACCGCCGGCGGC 585
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      GATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTAAAAAAAAAAA 542
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      TTCAAGGTTCAGGCGGGGCTCAGCTACGGCGTCGTCGCGGCGGCGATGGTTTCTGCCGTC 645
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      AAAAAAAAAAAAAAAAAAAAAAAAA----------------------------------- 567
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      TTCTCATCCATCTTCTGATCCGTGAAACAAGCTAGTCACCCACCCATTTTTCTTTGGGAA 705
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      AAAATCTTTTCTGTCTCTTGATCTCTACGTCGTTCAGCTTTTACTCTGCAAGAAACGAAT 765
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GCACACTGGATGGATGGATGGATGGTTGGTTTGTGATGTGCTACACGAAGATTCGTTCTG 825
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      ATGTTGTACTCTTTTGTACCCTGATAAATAGATTTGAGACTTGATTTTTGTTCTTCTGTG 885
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GCTTGATGCTAGCTAGCTACATTCTGAATACTGATACACGCATATGCTAGTACTAAATCT 945
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      GAATAATCAATAATGTACCTCATTTTTTCTTCTGAATATTGATACCCTTAAGTCATAATA 1005
consensus_16340#3      ------------------------------------------------------------
consensus_16340#1      ------------------------------------------------------------
consensus_16340#2      ------------------------------------------------------------
consensus_16340#4      ------------------------------------------------------------
consensus_16340#5      ------------------------------------------------------------
                                                                                   

consensus_16340#0      ACATCTTTGTGGCAAAAAAAAAAGA 1030
consensus_16340#3      -------------------------
consensus_16340#1      -------------------------
consensus_16340#2      -------------------------
consensus_16340#4      -------------------------
consensus_16340#5      -------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)