cluster # 16342

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Oryza sativa
cluster # 16342 cluster # 16342 Sequences # 31 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_16342#0 length = 810 sequences # 15
consensus_16342#1 length = 771 sequences # 10

consensus_16342#2 length = 741 sequences # 5
consensus_16342#3 length = 157 sequences # 1

consensusID : consensus_16342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 810
fasta sequence

                              [GTTCCTGAACGGGACGATAG-CGAGTAGAAAAAGGAAAAGAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG--TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG-TTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF333311             [GTTCCTGAACGGGACGATAGCCGCGTAG CCAAGGAAAAGAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTC                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF333656             [                      GAGTAGAAAAAGGAAAAGAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG TTGTTTAGAGTACTAGTGTTCGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAAT                                                                           ]
[+] EMBL CF332504             [                      GAGTAGAAA   GAAAAGAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGGCTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGT                                                                                                                                                                                                                                    ]
[+] EMBL CF301139             [                                       GAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCCTCGGGCTCGGGTACACAGGCTGGTTTGTG                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF300748             [                                       GAAAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGT CACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCG                                                                                                                                                                                                  ]
[+] EMBL OSC0161              [                                         AAGCAGAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGANATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGG GCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTNTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTNGGACGCCGTTGAGAACAAGTTCANCGTCCTCACGTACGNCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BF430600             [                                              GAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTCCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCGTCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG TTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGGTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCA                                                                                             ]
[+] EMBL OSS14616A            [                                              GAGGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGG GCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGNGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGGGCCATCATCGCCCTCTGGCTGTGGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSS16445A            [                                                GGCCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGG GCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTNTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGNCGCGACCGNCGACGAGCTCATCGAAGACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSS15740A            [                                                  CCAGGGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGG NCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAANTTCCCCTCTCCTCTCCGCCTCCATGACGNACCGAGGCTATCTNTGCTCCGNGCGAGGGCGTCGTCCGACGANANCTCGTCCTCCGNCGNGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS11249A            [                                                      GGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGG GCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAANTTCCCCTCTCCTCTCCGNCTNCATGACGGANCGAGGCTATCTCTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF295989             [                                                                                                                                                                                                                                                                                                       GCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG TTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAA  AAAAA                                         ]
[-] EMBL CF332503             [                                                                                                                                                                                                                                                                                                                TCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG TTGTTTAGGGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAA  AAA                                           ]
[+] EMBL BQ906700             [                                                                                                                                                                                                                                                                                                                                                                CCGTCCTCACGTACGCCGGCGGCGCCATCGTCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAATTCCGTGCCTCTGCTTCCCCAGTTCATGGAGCTCGTCGGGCTCGGGTACACCGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCNGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTATAAAAAATGCCGTCGTCTGCACCCATTTTTTGGAACGATTCTTTGGATCGCACCTTGCAGAGACCCAAACCCGCTTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCNATAACNGTGTNTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTTTCGACTAA  AAAAAAAA                                      ]
[+] EMBL AU057651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAG  TAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCG TTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGNCTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_16342#0
GTTCCTGAACGGGACGATAGCGAGTAGAAAAAGGAAAAGAAAGCAGAGGCCAGGGAAGAG
CCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGC
CTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTC
TCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTAT
CTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACG
AGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCA
CGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCA
ACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGT
TTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATT
CTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTT
GGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTG
TTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCAC
GTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_16342#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 771
fasta sequence

                              [GGCCACCGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCA-TCGCCCTCTGGCTGTCGT-CCGTCATCGTCGGCGCCGT-CAACT-CCGTG-CCTCTGCTT-CCCAAGTT-CATGGAGCTCGTCGGGCT-CGGGTACACAGGCTGGTTTGTGTACCGCTACC-TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA-CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAAAAAACCTTCACTTAACCAGCGAGAGCCAACGGTCGCGCGGCAAA]

[+] EMBL CB672501             [GGCCACCGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCA TCGCCCTCTGGCTGTCGT CCGTCATCGTCGGCGCCGT CAACT CCGTG CCTCTGCTT CCCAAGTT CATGGAGCTCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTGCCTTCACTTAACCAGCGAGAGCCAACGGTCGCGCGGCAAA]
[+] EMBL AU057650             [          GAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF295990             [                   AGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCA TCGCCCTCTGGCTGTCGT CCGTCATCGTCGGCGCCGT CAACT CCGTG CCTCTGCTT CCCAAGTT CATGGAGCTCGTCG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK058271             [                                                                                                                                                                                                             CGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCGGCGGCGCCATCA TCGCCCTCTGGCTGTCGT CCGTCATCGTCGGCGCCGT CAACT CCGTG CCTCTGCTT CCCAAGTT CATGGAGCTCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTC                                                              ]
[-] EMBL CF334331             [                                                                                                                                                                                                                                                                                                                                 GGCGGCGCCATCATTCGCCCTCTGGCTGTCGT CCGTCATCGTCGGCGCCGT CAACT CCGTG CCTCTGCTT CCCAAGTT CATGGAGCTCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACCTTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAAAAAA                                        ]
[+] EMBL AU070411             [                                                                                                                                                                                                                                                                                                                                   CGGCGCCATCATTCGCCCTCTGGCTGTCGTCCCGTCATCGTCGGCGCCGTACAACTCCCGTGCCCTCTGCTTCCCCAAGTTCCATGGAGCTCGTCGGGCTCCGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTACCCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAAAAA                                         ]
[+] EMBL AU096718             [                                                                                                                                                                                                                                                                                                                                                         GCTGTCGT CCGTCATCGTCGGCGCCGT NAAAT CCGTG CATCTGCTT CCCAAGTT CATGGAGCTCGTCGGGNT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAAAAAAaaaaaa                                  ]
[-] EMBL CF300749             [                                                                                                                                                                                                                                                                                                                                                                          GTCGGCGCCGT CAACT CCGTG CCTCTGCTT CCCAAGTT CATGGAGCTCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAAaaaa                                                                        ]
[+] EMBL AU096898             [                                                                                                                                                                                                                                                                                                                                                                                                                       TGGAGCTCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTAAAAA                                                                               ]
[-] EMBL CF301140             [                                                                                                                                                                                                                                                                                                                                                                                                                             TCGTCGGGCT CGGGTACACAGGCTGGTTTGTGTACCGCTACC TCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTA CCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATCGAATTTATAATAAaaaa                                                                        ]




>consensus_16342#1
GGCCACCGAAGAGCCAGGTAGAGCCGAAGAGGGTCCACGACTGACATGGCCGCCACGGCG
TGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCG
CCGCCCTCCGTTCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGAC
GCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCC
GCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAG
TCCACCGTCCTCACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATC
GTCGGCGCCGTCAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGG
TACACAGGCTGGTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCC
GACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCT
GCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTT
TAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATA
ACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTA
ATAATAAAAAACCTTCACTTAACCAGCGAGAGCCAACGGTCGCGCGGCAAA

consensusID : consensus_16342#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 741
fasta sequence

                              [GGGATAAGCTTGCGGCCGCTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTCCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACC-GTCCTCACGTACGCCGGCGGC-GCCATCGTC-GCCCTCTGGCTGTCGTCC-GTCATCGTCGGCGCCGTCAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTA-CCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCA-AAACCCGTTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGC-AATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTGCCTTCACTTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BI305999             [GGGATAAGCTTGCGGCCGCTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTCCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACC GTCCTCACGTACGCCGGCGGC GCCATCGTC GCCCTCTGGCTGTCGTCC GTCATCGTCGGCGCCGTCAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTA CCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCA AAACCCGTTGTTTAGAGTACTAGTGTGTGGTACCG                                                                                                                                             ]
[+] EMBL BI809007             [                                                                                                                                                                                                                   tctCGCCGCGACCGGCGACGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCAGTCCTCACGTACGCCGGCGGCAGCCATCGTCAGCCCTCT GCTGTCGTCCAGTCATCGTCGGCCCAGTCAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTA CCTCCTCTTCAAGGAAA CAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACC ATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCACAAACCCGTTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAAATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTaaaaaaa                                              ]
[-] EMBL CF333657             [                                                                                                                                                                                                                                                        AAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCCCC GTCCTCACGTACGCCGGCGGC GCCATCATC GCCCTTTGGCTGTCGTCC GTCATCGTCGGCGCCGTCAACTCCGTGCCTTTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCCCTACCCTCCTTTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTTTTTGAAAAAAAGGATTGCTGGGACAAAGTAAAAAATGCCGTCGTTTGCACCAATTTTTTGGAACGATTTTTTGGATCGCACATTGCAGAGACCA AAACCCGTTGTTTAGAGTACTAGTGTTCGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGC AATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTGCCTTCACTTAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF195994             [                                                                                                                                                                                                                                                                                                                                                      GTCGGCGCCGTCAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACCGCTA CCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCA AAACCCGTTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGC AATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTANGNNNNGCGTCTNNNCTAATTNNTAAAAAa                                   ]
[+] EMBL AU096971             [                                                                                                                                                                                                                                                                                                                                                                                                                                             ctcCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATTCTTTGGATCGCACATTGCAGAGACCA AAACCCGTTGTTTAGAGTACTAGTGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGC AATAACAGTGTCTTCACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTGCCTTCACTTAAAAAAAAAAAAAAAAAAA    ]




>consensus_16342#2
GGGATAAGCTTGCGGCCGCTGACATGGCCGCCACGGCGTGCTCCACGGCGCCTCTTCTCG
GTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGTCCTCCTCCTCC
CCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCTATCTCTGCTCC
GGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGACGAGCTCATCG
AAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCTCACGTACGCCG
GCGGCGCCATCGTCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGTCAATTCCGTGC
CTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTGGTTTGTGTACC
GCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGATTCTTTGAAGA
AGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTTTTGGAACGATT
CTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAGTGTTTGGTACC
GCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTCACGTGTAGATC
GAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTGCCTTCACTTAA
AAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_16342#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 157
fasta sequence

                              [AGAGGACGAGACAAGGGGGTATTAGTGTTTGGTACCCCGAAGCTTTGTTTTGTTCCCTTCCTTGATGGGCAATAACAGTGTCTTCCCGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGNCTAATTAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760466             [AGAGGACGAGACAAGGGGGTATTAGTGTTTGGTACCCCGAAGCTTTGTTTTGTTCCCTTCCTTGATGGGCAATAACAGTGTCTTCCCGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGNCTAATTAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_16342#3
AGAGGACGAGACAAGGGGGTATTAGTGTTTGGTACCCCGAAGCTTTGTTTTGTTCCCTTC
CTTGATGGGCAATAACAGTGTCTTCCCGTGTAGATCGAATTAATAATAATTACGAATTGC
GTCTCGNCTAATTAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16342#0      GTTCCTGAACGGGACGATAGCGAGTAGAAAAAGGAAAAGAAAGCAGAGGCCAGGGAAGAG 60
consensus_16342#1      -----------------------------------------------GGCCACCGAAGAG 13
consensus_16342#2      ------------------------------------------------------------
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      CCAGGTAGAGCCGAAGAGGGT--CCACGACTGACATGGCCGCCACGGCGTGCTCCACGGC 118
consensus_16342#1      CCAGGTAGAGCCGAAGAGGGT--CCACGACTGACATGGCCGCCACGGCGTGCTCCACGGC 71
consensus_16342#2      -----------GGGATAAGCTTGCGGCCGCTGACATGGCCGCCACGGCGTGCTCCACGGC 49
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      GCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGT 178
consensus_16342#1      GCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGT 131
consensus_16342#2      GCCTCTTCTCGGTGGAGCTCGCCTCCCCGCCGTCGGCGCCGCCTTGCCGCCGCCCTCCGT 109
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      TCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCT 238
consensus_16342#1      TCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCT 191
consensus_16342#2      CCTCCTCCTCCCCCAGCGCAACTTCCCCTCTCCTCTCCGCCTCCATGACGCACCGAGGCT 169
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      ATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGA 298
consensus_16342#1      ATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGA 251
consensus_16342#2      ATCTCTGCTCCGGGCGAGGGCGTCGTCCGACGACACCTCGTCCTCCGCCGCGACCGGCGA 229
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      CGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCT 358
consensus_16342#1      CGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCT 311
consensus_16342#2      CGAGCTCATCGAAGACCTGAAAGCTAAGTGGGACGCCGTTGAGAACAAGTCCACCGTCCT 289
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      CACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGT 418
consensus_16342#1      CACGTACGCCGGCGGCGCCATCATCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGT 371
consensus_16342#2      CACGTACGCCGGCGGCGCCATCGTCGCCCTCTGGCTGTCGTCCGTCATCGTCGGCGCCGT 349
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      CAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTG 478
consensus_16342#1      CAACTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTG 431
consensus_16342#2      CAATTCCGTGCCTCTGCTTCCCAAGTTCATGGAGCTCGTCGGGCTCGGGTACACAGGCTG 409
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      GTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGA 538
consensus_16342#1      GTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGA 491
consensus_16342#2      GTTTGTGTACCGCTACCTCCTCTTCAAGGAAAGCAGGAAGGAATTGGCCGACGACGTCGA 469
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      TTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTT 598
consensus_16342#1      TTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTT 551
consensus_16342#2      TTCTTTGAAGAAGAGGATTGCTGGGACAGAGTAAAAAATGCCGTCGTCTGCACCAATTTT 529
consensus_16342#3      ------------------------------------------------------------
                                                                                   

consensus_16342#0      TTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAG 658
consensus_16342#1      TTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAG 611
consensus_16342#2      TTGGAACGATTCTTTGGATCGCACATTGCAGAGACCAAAACCCGTTGTTTAGAGTACTAG 589
consensus_16342#3      -----------------------------AGAGGACGAGACAAG------GGGGTATTAG 25
                                                    ****  * * **  *       * *** ***

consensus_16342#0      TGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTC 718
consensus_16342#1      TGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTC 671
consensus_16342#2      TGTTTGGTACCGCGAAGCTTTGTTTTGTTCCTTTCCTTGATGGGCAATAACAGTGTCTTC 649
consensus_16342#3      TGTTTGGTACCCCGAAGCTTTGTTTTGTTCCCTTCCTTGATGGGCAATAACAGTGTCTTC 85
                       *********** ******************* ****************************

consensus_16342#0      ACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAAAAAAAAAAAAAAAA 778
consensus_16342#1      ACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAAAAAA 731
consensus_16342#2      ACGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGACTAATTAATAATAATTTG 709
consensus_16342#3      CCGTGTAGATCGAATTAATAATAATTACGAATTGCGTCTCGNCTAATTAAAAAAAAAAAA 145
                        **************************************** ****  ** ** **    

consensus_16342#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------- 810
consensus_16342#1      CCTTCACTTAACCAGCGAGAGCCAACGGTCGCGCGGCAAA 771
consensus_16342#2      CCTTCACTTAAAAAAAAAAAAAAAAAAAAAAA-------- 741
consensus_16342#3      AAAAAAAAAAAA---------------------------- 157
                            *   **