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Oryza sativa
cluster # 16343 cluster # 16343       Sequences # 32       consensus # 9


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16343#0 length = 1232 sequences # 10  
consensus_16343#1 length = 1107 sequences # 4  
consensus_16343#2 length = 1006 sequences # 2  
consensus_16343#3 length = 629 sequences # 4  
consensus_16343#4 length = 586 sequences # 7  
consensus_16343#5 length = 526 sequences # 1  
consensus_16343#6 length = 496 sequences # 1  
consensus_16343#7 length = 491 sequences # 2  
consensus_16343#8 length = 223 sequences # 1  

consensusID : consensus_16343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1232
fasta sequence
                              [CCCTCCACGCAACAG--AA----ACCACACCCCGATACGACTAGGAAGGAATTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCAATCCTGCAGGAG--G----GTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA-GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGC-TGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTACTTGTTGCTGGGAGTATGAAGTACTGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGCTAAAAGTTGCTATATTTTAGAAAAAAAAAT]

[+] EMBL CF319902             [CCCTCCACGCAACAG  AA    ACCACACCCCGATACGACTAGGAAGGAATTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCAATCCTGCAGGAG  G    GTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF293333             [    CCACGCAACGGTAAACCACACCACACCCCGATACGACT    AGGATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACG    CGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAAGCAGTCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAA TGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CK085156             [       CGCAACAG  AA    ACCACACCCCGATACTACTATGAAAGAATTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCAATCCTGCAGGAG  G    GTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB641554             [                              CCCGATACGACTAGGAAGGAATTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCAATCCTGCAGGAG  G    GTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTG                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB662695             [                                                 AATTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCAATCCTGCAGGAG  G    GTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGTTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTG                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF276843             [                                                                                                                                                          AGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF309342             [                                                                                                                                                          AGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB662696             [                                                                                                                                                                                                                                                                                                                                                                                                                  CAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGGCGATCCTTCATGACACTTGTTGTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGTTGTTAAAAGTGAAAGCACATGCTTATTTTTCCACCACATCATTGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTGTGCAGTACGTACCGTTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAATGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCCCTCAACTTGTTCTATGCACGGAAATTGGTGCGTGCCGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACATTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTTCAAAGTATCGGAATTCTGAA                                                                                                                         ]
[-] EMBL CB641555             [                                                                                                                                                                                                                                                                                                                                                                                                                    GCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAA GGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGC TGCTATCTGAATTCTGAAAGTAATGCTATGATTACT                                                                                                       ]
[-] EMBL CF276844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACCCTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGC TGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTACTTGTTGCTGGGAGTATGAAGTACTGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGCTAAAAGTTGCTATATTTTAGAAAAAAAAAT]


>consensus_16343#0 CCCTCCACGCAACAGAAACCACACCCCGATACGACTAGGAAGGAATTCCTCTCTGCTTCT TCGATCCCCTTGTTATTACAATCAATCCTGCAGGAGGGTATAATTGCAGCGGCAAGATCG ATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGT CAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTT AATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAA AACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAA GATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACAT CACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGAT CCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGA CTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAA ACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATG CTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGA GTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCA GTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCT GGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACT CAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTA CACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGT TATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTG CACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAC TTGTTGCTGGGAGTATGAAGTACTGTACTCATACTCAGTCCTAGAATATAACTACTTTTA GCTAAAAGTTGCTATATTTTAGAAAAAAAAAT



consensusID : consensus_16343#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1107
fasta sequence
                              [TCCATGGACTGAAGGAGTAGAAACCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAAGCAG-TCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTAT-GCAACTCTCGTCTTTGCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCTCTG-CAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATACTTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF310672             [TCCATGGACTGAAGGAGTAGAAACCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAAGCAG TCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTAT GCAACTCTCGTCTTTGCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCTCTG CAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C96762               [                                                                                          ACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAG TGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAA NAGTTCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGGCAACTCTCGTCTTTGCAAAAATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C96763               [                                                                                                                                                                                                                                                                                                                                                                                                                                                       cCCTTCATGACACTTNTTCTCAGACATTCCCCTTTGAGCAAAAGTGTCTTGAGACTATGNCCCCCTAT GCAACTCTCGTC TTGCAAAAATTGCTGAGATTANGCCAGATGAGTTCTGCAAACAGTATGGCCTCTGCCAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATACTTAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF313937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCTCTG CAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATA   AAAAAAA                   ]


>consensus_16343#1 TCCATGGACTGAAGGAGTAGAAACCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACT CTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGC GCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTT CCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATT TTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGG AGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGT GCTCGGCTTGTGAAAACATCACAAGCGAAGCAGTCAACTTTCTTAGTGAGAAACAAATAC AAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAA AGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAAAATTGCTGAGATTA AGCCAGATGAGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTA TGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAAC TGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGA TTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAG TGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATG CAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAA GTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGT GATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGG GATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATACT TAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16343#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1006
fasta sequence
                              [CCTTTCGATTCCCCCTCCTCTCTTCCTTCCCCTATCGTCAACTAGCTCGAGTTGCTTGCTTGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCCTTTCTTTTTCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCGATTTGGCCGCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCAGGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTA]

[+] EMBL AK120247             [CCTTTCGATTCCCCCTCCTCTCTTCCTTCCCCTATCGTCAACTAGCTCGAGTTGCTTGCTTGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCCTTTCTTTTTCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCGATTTGGCCGCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCAGGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTA]
[+] EMBL CF311292             [                       TCCTTCCCCTATCGTCAACTAGCTCGAGTTGCTTGCTTGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCCTTTCTTTTTCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCGATTTGGCCGCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCAGGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGC                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_16343#2 CCTTTCGATTCCCCCTCCTCTCTTCCTTCCCCTATCGTCAACTAGCTCGAGTTGCTTGCT TGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCCTTTCTTTT TCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCGATTTGGCC GCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCAGGTCAATT GCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTTAATCG TCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAAAACAA CTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAAGATAC CTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAA GTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGATCCTTC ATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCT ATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCGCAGCAG TGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTG GAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTC AACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTAC ACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTT ATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGC ACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTA



consensusID : consensus_16343#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 629
fasta sequence
                              [GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACGAATTCATACCCTCCACGCAACGGAAACCACACCACACCCCGATACGACTAGGATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGC-TCAAGGTCAAGGCAATG-ATTTTGTTGTCCTTGATC-TAAAAACAACTGA-GGTC-G-GGGAAGATGCTAGCCCAATGTACAA-GGAGCAAATTGCG-TTGACCAA-GATACCTGTAACTCTTCTGA-GGAGCAAGCACAGCTCACTGTGC-T-C-GGCTTG-TGAAAACATCACAA-GCGAAAGCAGTCAAC-TTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAAAAT]

[+] EMBL CF313936             [GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACGAATTCATACCCTCCACGCAACGGAAACCACACCACACCCCGATACGACTAGAATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCAGTTAATCGTCACCTGCGGAGCTGC TCAAGGTCAAGGCAAGGNATTTTGTTGTCCTTGATC TAGAAACAACTGA GGTC GNGGGAAGATGCTAGCCCAATGTACAA GGAGCAAATTGCG TTGACCAA GATACCTGTAACTCTTCTGA GGAGCAAGCACAGCTCACTGTGC TNC GGCTTG TGAAAACATCACAACGNNAAAGCAGTCAAC TTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAA   ]
[+] EMBL CF302335             [                                   GAGTGAAAAACGAATT ATACCCTCC CGCAACGGAAACCACACCACACCCCGATACGACTAGGATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGC TCAAGGTCAAGGCAATG ATTTTGTTGTCCTTGATC TAAAAACAACTGA GGTC G GGGAAGATGCTAGCCCAATGTACAA GGAGCAAATTGCG TTGACCAA GATACCTGTAACTCTTCTGA GGAGCAAGCACAGCTCACTGTGC T C GGCTTG TGAAAACATCACAA GCG AAGCAGTCAAC TTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTC           ]
[+] EMBL C28904               [                                                                                        ATACGACTAGGATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTG GATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGANTTGCTTCAAGGTCAAGGCAATG ATTTTGTTGTCCTTGATCTTAAAAACAACTGAGGGTCGG GGGAAGATGCTAGCCCAATGTACAAGGGAGCAAATTGCGTTTGACCAAGGATACCTGTAACTCTTCTGAGGGAGCAAGCACAGCTCACTGTGCTT CGGGCTTGTTGAAAACATCACAAGGCGANGGGGTTCAACTTTTCTTAGgtg                                                                                                                        ]
[+] EMBL CF325500             [                                                                                               TAGGATTTCCTCTCTGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGC TCAAGGTCAAGGCAATG ATTTTGTTGTCCTTGATC TAAAAACAACTGA GGTC G GGGAAGATGCTAGCCCAATGTACAA GGAGCAAATTGCG TTGACCAA GATACCTGTAACTCTTCTGA GGAGCAAGCACAGCTCACTGTGC T C GGCTTG TGAAAACATCACAA GCG AAGCAGTCAAC TTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAAAAT]


>consensus_16343#3 GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAACGAATTCATACCCTC CACGCAACGGAAACCACACCACACCCCGATACGACTAGGATTTCCTCTCTGCTTCTTCGA TCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGAT CGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCA ATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAA TCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAA CAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGA TACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCA CAAGCGAAAGCAGTCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATC CTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGAC TCCTATGCAACTCTCGTCTTTGCAAAAAT



consensusID : consensus_16343#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 586
fasta sequence
                              [TGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGAT-GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT-GCAACAAGATTGAAGGTCATCA--GCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGA-ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG-CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA-CGAATCAAGTTGTGGTAGGCA-TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAAAAAAAAAAAAAA]

[-] EMBL CF325689             [TGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGAT GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT GCAACAAGATTGAAGGTCATCA  GCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGA ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAAAAAAAAAAAAAA]
[-] EMBL CF311293             [TGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGAT GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT GCAACAAGATTGAAGGTCATCA  GCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGA ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAAA           ]
[-] EMBL CF319903             [TGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGAT GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT GCAACAAGATTGAAGGTCATCA  GCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGA ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAA            ]
[+] EMBL BM038462             [                                          CTCCAGGGACATGGCTCTTTTATCACCTGTTAAAAGTGAAAGCACATGCTTATTCT CCACCACATCATCGATGAAATTACGTCCCAACTGAAAGATCCTGAT GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT GC ACAAGATTGAAGGTCATCA  GCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGA ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG CCAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACCGAATCAAGTTGTGGTAGGCACTGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCCATACCCTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTAaaaaaaaaa                    ]
[+] EMBL BI807824             [                                                                                 AAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCC AACTGAAAGATCCTGAT GCAGAGTTTGAGATCATTCAATTACTACTCAAGGAAT GCAACAAGATTGAAGGTCATCA  GCAGCAGTGCAAGAGGATGGTTCT CAGTACGTACCGCTGGTTCTGGTGA ACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGG CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATAC CTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAAA           ]
[+] EMBL BI807952             [                                                                                                                                    GAAAGATCCTGATCCCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATCGCCACAAGATTGAAGGTCATCAGCGCACCAGTCCAAGAGGATGGTTCTCCAGTACGTACCCCTGGTTCTGGTGACACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGC CAATGATCCAAGCCTGTGAT CAGGCCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTAC  CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGAT GCAGCTTGTACATATGGTTATTATTAATGAAATATTA GC ATAC CTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAA             ]
[+] EMBL C97826               [                                                                                                                                                                                                                                                                                                         ATGATCCAAGCCTGTGATGCAGG CAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACA CGAATCAAGTTGTGGTAGGCA TGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAATGCTATGATTACTTTTTTGTG                   ]


>consensus_16343#4 TGCTGAGATCAAGCCAGCTGCGTTCTGCAAACAGTATGGCCTCTGCAGGGACATGGCTCT TTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAAT TACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGA ATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACC GCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCA AGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCG TGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAATCAAGTTGTGGTAGGCATGGAGAA GACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACT ATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGA AAGTAATGCTATGATTACTTTTTTGTGTAAAAAAAAAAAAAAAAAA



consensusID : consensus_16343#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence
                              [CTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGCGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAAAAAAATTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAAAAAAAAAAAAAAAAAAAAACAC]

[-] EMBL CF309343             [CTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGCGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAAAAAAATTGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGAAATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATTCTGAAAGTAAAAAAAAAAAAAAAAAAAAACAC]


>consensus_16343#5 CTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATGCTTATTCTGCCA CCACATCATCGATGAAATTACGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCAT TCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGAT GGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGAGAAGTTCCTGGAGAAGAACGA TGTGCGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCACTCAACTTGTTCTC TGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCGTACACGAAAAAAAT TGTGGTAGGCATGGAGAAGACGAAGTGATGGCAGCTTGTACATATGGTTATTATTAATGA AATATTAGGCAATACACTATGTGAAGGGGATGATACGATAATTATGTGCACATACTTGTG CTGCTATCTGAATTCTGAAAGTAAAAAAAAAAAAAAAAAAAAACAC



consensusID : consensus_16343#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence
                              [GCCCANAGTTAACAGGTTACCCGCCTTGGTTTCCTCGTGTNTGTNACCGTGTTAGTAGAAAATGTTTTCCACTTGGGGAAGAAGAGCACTACAGNATTGTGTTNGCCCAGCCCAATATGTGGNATCCCCCANAAGGCCCCTTGTAGNATTGCCAGGCCAAAGAGGTATAGCGCTACTCAAACTTGTTCTCTGCCNCGGAAATTGGTTGCGTGGTACGCATGTAAGTAGTAGGAAGCGTGCGTACACGAATCCAAGTTGTGGTAGNCCATGGAGAAGACGAAGTGATGCCAGCTTGTACATATGGTTATTATTAATGAAATATTAGCCCAATACACTATGTGAAGGGGATGATCCGATAATTATGNGCACATACTTGTCTCTATCTGAATTCGTGAAAGTAANGCTAGGATTACTTTTNTGGNGTACTNGGTTGCNGGGAGTATGAAGTNCGGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGGCTAAAAA]

[+] EMBL BM419816             [GCCCANAGTTAACAGGTTACCCGCCTTGGTTTCCTCGTGTNTGTNACCGTGTTAGTAGAAAATGTTTTCCACTTGGGGAAGAAGAGCACTACAGNATTGTGTTNGCCCAGCCCAATATGTGGNATCCCCCANAAGGCCCCTTGTAGNATTGCCAGGCCAAAGAGGTATAGCGCTACTCAAACTTGTTCTCTGCCNCGGAAATTGGTTGCGTGGTACGCATGTAAGTAGTAGGAAGCGTGCGTACACGAATCCAAGTTGTGGTAGNCCATGGAGAAGACGAAGTGATGCCAGCTTGTACATATGGTTATTATTAATGAAATATTAGCCCAATACACTATGTGAAGGGGATGATCCGATAATTATGNGCACATACTTGTCTCTATCTGAATTCGTGAAAGTAANGCTAGGATTACTTTTNTGGNGTACTNGGTTGCNGGGAGTATGAAGTNCGGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGGCTAAAAA]


>consensus_16343#6 GCCCANAGTTAACAGGTTACCCGCCTTGGTTTCCTCGTGTNTGTNACCGTGTTAGTAGAA AATGTTTTCCACTTGGGGAAGAAGAGCACTACAGNATTGTGTTNGCCCAGCCCAATATGT GGNATCCCCCANAAGGCCCCTTGTAGNATTGCCAGGCCAAAGAGGTATAGCGCTACTCAA ACTTGTTCTCTGCCNCGGAAATTGGTTGCGTGGTACGCATGTAAGTAGTAGGAAGCGTGC GTACACGAATCCAAGTTGTGGTAGNCCATGGAGAAGACGAAGTGATGCCAGCTTGTACAT ATGGTTATTATTAATGAAATATTAGCCCAATACACTATGTGAAGGGGATGATCCGATAAT TATGNGCACATACTTGTCTCTATCTGAATTCGTGAAAGTAANGCTAGGATTACTTTTNTG GNGTACTNGGTTGCNGGGAGTATGAAGTNCGGTACTCATACTCAGTCCTAGAATATAACT ACTTTTAGGCTAAAAA



consensusID : consensus_16343#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 491
fasta sequence
                              [GAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATACTTACTTTTGTGTGCTTGCTTCTGGGGAGTATGGAGCAGTATACTCCAAAAAAAAAA]

[-] EMBL CF302336             [GAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATAGTAATGGCTATACTTACTTTTGTGTGCTTGCTTCTGGGGAGTATGGAGCAGTATACTCCAAAAAAAAAA]
[+] EMBL AI978314             [                          TGATGCAGAGTTTGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATGATCCAAGCCTGTGATGCNNNCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGnnnn                                                                                                                                                                                                   ]


>consensus_16343#7 GAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTACTC AAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAGTAC GTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCAATG ATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAATTG GTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATG GAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGATATAGGCAAT ACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGA TAGTAATGGCTATACTTACTTTTGTGTGCTTGCTTCTGGGGAGTATGGAGCAGTATACTC CAAAAAAAAAA



consensusID : consensus_16343#8
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 223
fasta sequence
                              [ATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCANNNAAATTGGTGCGNNNNGCANGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGGTATAGCCATTACTATCAGACAAACAGTTCAAATGTGTGCATACAATTATC]

[-] EMBL AI978313             [ATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCANNNAAATTGGTGCGNNNNGCANGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGGTATAGCCATTACTATCAGACAAACAGTTCAAATGTGTGCATACAATTATC]


>consensus_16343#8 ATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCANNNAAA TTGGTGCGNNNNGCANGAAGTAGTAGGAAGCGTGCATACACGAATCAAGTTGTGGTAGGC ATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAATGGTATAGCC ATTACTATCAGACAAACAGTTCAAATGTGTGCATACAATTATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      ------------------------------------------------------------
consensus_16343#1      -----------------------------------------TCCATGGACTGAAGGAGTA 19
consensus_16343#0      CCCTCCACGCAACAGAAACCACACCCCGATACGACTAGGAAGGAATTCCTCTCTGCTTCT 60
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      ------------------------------------------------------------
consensus_16343#1      GAAACCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAG 79
consensus_16343#0      TCGATCCCCTTGTTATTACAATCAATCCTGCAGGAGGGTATAATTGCAGCGGCAAGATCG 120
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      -------CCTTTCGATTCCCCCTCCTCTCTTCCTTCCCCTATCGTCAACTAGCTCGAGTT 53
consensus_16343#1      ATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGT 139
consensus_16343#0      ATTTTTTACAAACCAACATAGCAGAAAGGATTTACGCCGCCGCCGCCGCTTGCGATTTGT 180
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      GCTTGCTTGTTCCCTCTGCTGCTTCCTCTCTTGTGTGGATTGGATTCCCGGCCTGGCCCT 113
consensus_16343#1      CAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTT 199
consensus_16343#0      CAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTGTT 240
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      TTCTTTTTCCTCTTCTCTCCTAGATTAGAATCGTCGCGATTTGATTCCTCAATCTCTCGA 173
consensus_16343#1      AATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAA 259
consensus_16343#0      AATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATCTAAA 300
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      TTTGGCCGCCCTATCTGTTATTAATCCCCAATTGTTCTTCACACACATACTCAATTGCAG 233
consensus_16343#1      AACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAA 319
consensus_16343#0      AACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGACCAA 360
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      GTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTTGCTTCCTTTCTCCTACTCCTG 293
consensus_16343#1      GATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACAT 379
consensus_16343#0      GATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACAT 420
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      TTAATCGTCACCTGCGGAGCTGCTCAAGGTCAAGGCAACGATTTTGTTGTCCTTGATC-- 351
consensus_16343#1      CACAAGCGAAGCAGTCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTAT 439
consensus_16343#0      CACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGACGAT 480
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      TAAAAACAACTGAGATCGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTCGA 411
consensus_16343#1      CCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGA 499
consensus_16343#0      CCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGA 540
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------TGCTGAGATCAAGCCAGCTGCGTTCTGCAA 30
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      CCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAA 471
consensus_16343#1      CTCCTATGCAACTCTCGTCTTTGCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAA 559
consensus_16343#0      CTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCTGCAA 600
consensus_16343#3      ------------------------------------------------------------
                                                                                   

consensus_16343#6      ------------------------------------------------------------
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATG 90
consensus_16343#5      ------------CTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATG 48
consensus_16343#7      ------------------------------------------------------------
consensus_16343#2      ACATCACAAGTGAAGCTGTCAATTTTCTTAGTGAAAAACAAATACAAGATAAGATAAGGA 531
consensus_16343#1      ACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATG 619
consensus_16343#0      ACAGTATGGCCTCTGCAGGGACATGGCTCTTTTATCAGCTGTTAAAAGTGAAAGCACATG 660
consensus_16343#3      -----------------GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAA 43
                                                                                   

consensus_16343#6      ----------------------------------------------G---CCCANAGTTA 11
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      CTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAG---ATCCTGATGC 147
consensus_16343#5      CTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAG---ATCCTGATGC 105
consensus_16343#7      -------------------------GAAATTATGTCCAAACTGAAAG---ATCCTGATGC 32
consensus_16343#2      CGATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTA 591
consensus_16343#1      CGTATTCTGCCACCACATCATCGATGAAATTATGTCCAAACTGAAAG---ATCCTGATGC 676
consensus_16343#0      CTTATTCTGCCACCACATCATCGATGAAATTACGTCCAAACTGAAAG---ATCCTGATGC 717
consensus_16343#3      AACGAATTCATACCCTCCACGCAACGGAAACCACACCACACCCCGATACGACTAGGATTT 103
                                                                                   

consensus_16343#6      ACAGGT----TACCCGCCTTGGTTTCCTCGTGTNTGTNACCGTGTTAGTAGAAA-ATGTT 66
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      AGAGTT----TGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAG-GTCAT 202
consensus_16343#5      AGAGTT----TGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAG-GTCAT 160
consensus_16343#7      AGAGTT----TGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAG-GTCAT 87
consensus_16343#2      TGGACTCCTATGCAACTCTTGTCTTTGCAAAAATTGCTGAGATCAAGCCAGCTGCGTTCT 651
consensus_16343#1      AGAGTT----TGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAG-GTCAT 731
consensus_16343#0      AGAGTT----TGAGATCATTCAATTACTACTCAAGGAATGCAACAAGATTGAAG-GTCAT 772
consensus_16343#3      CCTCTC----TGCTTCTTCGATCCCCTTGTTATTACAATCGATCCTGCAAGAGAAGCACT 159
                                                                                   

consensus_16343#6      TTCCACTTGG-GGAAGAAGA--GCACTACAGNA--TTGTGTTNGCCCAGCCCAATA-TGT 120
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      CAGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGA 261
consensus_16343#5      CAGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGA 219
consensus_16343#7      CAGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGA 146
consensus_16343#2      GCGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGA 710
consensus_16343#1      CAGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGA 790
consensus_16343#0      CAGCAGCAGT-GCAAGAGGATGGTTCTGCAGTACGTACCGCTGGTTCTGGTGAACGGTGA 831
consensus_16343#3      CTATAATTGCAGCGGCAAGATCGATTTTTTACAAACCAACAAAGCAGAAAGGATTCACGC 219
                                                                                   

consensus_16343#6      GGNATCCCCCANAAG--GCCCCTTGTA---GNATTG--CCA--GGCCAAAGAGGTATA-- 169
consensus_16343#8      ------------ATG--ATCCAAGCCT---GTGATG--C-A--GGC--AAGAGGAA---- 32
consensus_16343#4      GAAGTTCCTGGAGAA--GAACGATGTGTGCGCAATGATCCA--AGCCTGTGATGCAGGCA 317
consensus_16343#5      GAAGTTCCTGGAGAA--GAACGATGTGCGCGCAATGATCCA--AGCCTGTGATGCAGGCA 275
consensus_16343#7      GAAGTTCCTGGAGAA--GAACGATGTGTGCGCAATGATCCA--AGCCTGTGATGCAGGCA 202
consensus_16343#2      GAAGTTCCTGGAGAA--GAACGATGTGTGCGCAATGATCCA--AGCCTGTGATGCAGGCA 766
consensus_16343#1      GAAGTTCCTGGAGAA--GAACGATGTGTGCGCAATGATCCA--AGCCTGTGATGCAGGCA 846
consensus_16343#0      GAAGTTCCTGGAGAA--GAACGATGTGTGCGCAATGATCCA--AGCCTGTGATGCAGGCA 887
consensus_16343#3      GCCGCCGCTTGCGATTTGTCAATTGCAGCCAGAAAGAGGCGATGGATTTCAAAGTCGCTT 279
                                                          *        *      * *      

consensus_16343#6      -----GCGCTACTCAAACTTGTTCTCTGCCNCGGAAATTGGTTGCGTGGTACGCATGTAA 224
consensus_16343#8      -------GGCATTCAA-CTTGTTCTCTGC-ANNNAAATTGGT---GCGNNNNGCANG-AA 79
consensus_16343#4      AGAGGAAGGCACTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 371
consensus_16343#5      AGAGGAAGGCACTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 329
consensus_16343#7      AGAGGAAGGCATTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 256
consensus_16343#2      AGAGGAAGGCACTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 820
consensus_16343#1      AGAGGAAGGCATTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 900
consensus_16343#0      AGAGGAAGGCACTCAA-CTTGTTCTCTGC-ACGGAAATTGGT---GCGTGACGCATG-AA 941
consensus_16343#3      CCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAG-CTGCTCAAGGTCAAGGCAATGAT 338
                                 * **    *  *  **  *     *   ** *   *      ***   * 

consensus_16343#6      GTAGTAGGAAGCGTGCGTACACGAATCCAAGTTGTGGTAGNCCATGG---AGAAGACGAA 281
consensus_16343#8      GTAGTAGGAAGCGTGCATACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 134
consensus_16343#4      GTAGTAGGAAGCGTGCGTACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 426
consensus_16343#5      GTAGTAGGAAGCGTGCGTACACGAAAA-AAATTGTGGTAGGC-ATGG---AGAAGACGAA 384
consensus_16343#7      GTAGTAGGAAGCGTGCATACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 311
consensus_16343#2      GTAGTAGGAAGCGTGCGTACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 875
consensus_16343#1      GTAGTAGGAAGCGTGCATACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 955
consensus_16343#0      GTAGTAGGAAGCGTGCGTACACGAATC-AAGTTGTGGTAGGC-ATGG---AGAAGACGAA 996
consensus_16343#3      TTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGATGCTAGCCCAATGTACAAG 398
                        * ** *     *  *  * *  **   *  * * ** **    * *   *    ** * 

consensus_16343#6      G---TGATGCCAGCTTGTACATATGGTTATTATTAAT--GAAATATTAGCCCAATAC-AC 335
consensus_16343#8      GAAGTGATGGCAGCTTGTACATATGGTTGTTATTAAT--GGTATAG----CCATTAC--- 185
consensus_16343#4      G---TGATGGCAGCTTGTACATATGGTTATTATTAAT--GAAATATTAG-GCAATAC-AC 479
consensus_16343#5      G---TGATGGCAGCTTGTACATATGGTTATTATTAAT--GAAATATTAG-GCAATAC-AC 437
consensus_16343#7      GAAGTGATGGCAGCTTGTACATATGGTTGTTATTAAT--GATA---TAG-GCAATACTAC 365
consensus_16343#2      G---TGATGGCAGCTTGTACATATGGTTATTATTAAT--GAAATATTAG-GCAATAC-AC 928
consensus_16343#1      GAAGTGATGGCAGCTTGTACATATGGTTGTTATTAAT--GATATAG----GCAATACTAC 1009
consensus_16343#0      G---TGATGGCAGCTTGTACATATGGTTATTATTAAT--GAAATATTAG-GCAATAC-AC 1049
consensus_16343#3      GAGCAAATTGC-GTTGACCAAGATACCTGTAACTCTTCTGAGGAGCAAGCACAGCTC-AC 456
                       *     **  * * *     * **   * * * *  *  *           **   *   

consensus_16343#6      TATGTGAAG---GGGATGATCCGATAATTATGNGCACATACTTGT-CTCTATCTGAATTC 391
consensus_16343#8      --TATCAGA---CAAACAGTTC---AAATGTGTGCATACAATTAT-C------------- 223
consensus_16343#4      TATGTGAAG---GGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATT 536
consensus_16343#5      TATGTGAAG---GGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATT 494
consensus_16343#7      TCTGTGAAG---GGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATA 422
consensus_16343#2      TATGTGAAG---GGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATT 985
consensus_16343#1      TCTGTGAAG---GGGATAATCCGATAATTGTATGCACACATTTGAACTGTTTGTCTGATA 1066
consensus_16343#0      TATGTGAAG---GGGATGATACGATAATTATGTGCACATACTTGTGCTGCTATCTGAATT 1106
consensus_16343#3      TGTGCTCGGCTTGTGAAAACATCACAAGCGAAAGCAGTCAACTTTCTTAGTGAGAAACAA 516
                         *            *         **      ***   *  *                 

consensus_16343#6      GTGAAAGTAANGCTAGGATTACTTTTNTGGNGTACTNGGTTGCNGGGAGTAT-------G 444
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      CTGAAAGTAATGCTATGATTACTTTTTTGTGTAAAAAAAAAAAAAAAAAA---------- 586
consensus_16343#5      CTGAAAGTAAAAA-------------------AAAAAAAAAAAAAAAACAC--------- 526
consensus_16343#7      GTAATGGCTATACTTACTTTTGTGTGCTTGCTTCTGGGGAGTATGGAGCAGT-------A 475
consensus_16343#2      CTGAAAGTAATGCTATGATTA--------------------------------------- 1006
consensus_16343#1      GTAATGGCTATACTTAAAAAA-------AAAAAAAAAAAAAAAAAAAA------------ 1107
consensus_16343#0      CTGAAAGTAATGCTATGATTACTTTTTT-GTGTACTTG-TTGCTGGGAGTAT-------G 1157
consensus_16343#3      ATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAGACATTCTCCTTTGAG 576
                                                                                   

consensus_16343#6      AAGTNCGGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGGCTAAAAA-------- 496
consensus_16343#8      ------------------------------------------------------------
consensus_16343#4      ------------------------------------------------------------
consensus_16343#5      ------------------------------------------------------------
consensus_16343#7      TACTCCAAAAAAAAAA-------------------------------------------- 491
consensus_16343#2      ------------------------------------------------------------
consensus_16343#1      ------------------------------------------------------------
consensus_16343#0      AAGTACTGTACTCATACTCAGTCCTAGAATATAACTACTTTTAGCTAAAAGTTGCTATAT 1217
consensus_16343#3      CAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTTGCAAAAAT------- 629
                                                                                   

consensus_16343#6      ---------------
consensus_16343#8      ---------------
consensus_16343#4      ---------------
consensus_16343#5      ---------------
consensus_16343#7      ---------------
consensus_16343#2      ---------------
consensus_16343#1      ---------------
consensus_16343#0      TTTAGAAAAAAAAAT 1232
consensus_16343#3      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)