cluster # 1635

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Oryza sativa
cluster # 1635 cluster # 1635 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1635#0 length = 541 sequences # 2

consensusID : consensus_1635#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 541
fasta sequence

                              [AATATCTAGCTTTGCAGAGATTTCCAGGATCATTTTGTCACCATGATTGTGGATAGGATTGGTAGAAA-CTGTCAATGGCATCAATGCTCTTCACAAGCTGTGTTTTCTTATTCCCACTAATTTTCTCCCGAACGGATATACTAACAAGAGTCTCCCTATTTGGAGCCCGGCTTTGCATATCTGCTAGCTTTACAATTGTATACATATATGCTCCAGAGATTTACCCAACCTCTGTCAGAACAACCGGAATTGGCGTGGCGAGCTCTGTAGGTAGGATTGGAGGCATCCTCTGTCCTCTCGTCGCTGTTGCTCTAGTACACAGCTGCCAGCAGACGACAGCGATCCTTCTCTTTGAGCTTGTAATCTTCCTCTCCGGGTTGGCTGTCTCA-TTTTTCCCTTTTGAGACAAAAGGCTGTAGACTTAACGACACCGAAGTCGTTATGAATT-GATGAGGTGATTGTATTGTCATACCA-TTTTTTCTGTGCTGAGTACGAAGTTCCCCTGTTAATTGAACATTTCCAGCAATGTGCTAAAAAAAAAA]

[+] EMBL BI806528             [AATATCTAGCTTTGCAGAGATTTCCAGGATCATTTTGTCACCATGATTGTGGATAGGATTGGTAGAAA CTGTCAATGGCATCAATGCTCTTCACAAGCTGTGTTTTCTTATTCCCACTAATTTTCTCCCGAACGGATATACTAACAAGAGTCTCCCTATTTGGAGCCCGGCTTTGCATATCTGCTAGCTTTACAATTGTATACATATATGCTCCAGAGATTTACCCAACCTCTGTCAGAACAACCGGAATTGGCGTGGCGAGCTCTGTAGGTAGGATTGGAGGCATCCTCTGTCCTCTCGTCGCTGTTGCTCTAGTACACAGCTGCCAGCAGACGACAGCGATCCTTCTCTTTGAGCTTGTAATCTTCCTCTCCGGGTTGGCTGTCTCA TTTTTCCCTTTTGAGACAAAAGGCTGTAGACTTAACGACACCGAAGTCGTTATGAATT GATGAGGTGATTGTATTGTCATACCA TTTTTTCTGTGCTGAGTACGAAGTTCCCCTGTTAATTGAACATTTCCAGCAATGTGCTAAAAAAAAAA]
[+] EMBL CA766144             [                                                         ATTGGTAGAAAGCTGTCAATGGCATCAATGCTCTTCACAAGCTGTGTTTTCTTATTCCCACTAATTTTCTCCCGAACGGATATACTAACAAGAGTCTCCCTATTTGGAGCCCGGCTTTGCATATCTGCTAGCTTTACAATTGTATACATATATGCTCCAGAGATTTACCCAACCTCTGTCAGAACAACCGGAATTGGCGTGGCGAGCTCTGTAGGTAGGATTGGAGGCATCCTCTGTCCTCTCGTCGCTGTTGCTCTAGTACACAGCTGCCAGCAGACGACAGCGATCCTTCTCTTTGAGCTTGNAATCTTCCTCTCCGGGTTGGCTGNCTCATTTTTTCCCTTTTGAGACAAAAGGCTGTAGACTTAACGACACCGAAGTCGNTATGAATTGGATGAGGGGATTGNATTGGCATACCATTTTTTTCTGng                                                         ]




>consensus_1635#0
AATATCTAGCTTTGCAGAGATTTCCAGGATCATTTTGTCACCATGATTGTGGATAGGATT
GGTAGAAACTGTCAATGGCATCAATGCTCTTCACAAGCTGTGTTTTCTTATTCCCACTAA
TTTTCTCCCGAACGGATATACTAACAAGAGTCTCCCTATTTGGAGCCCGGCTTTGCATAT
CTGCTAGCTTTACAATTGTATACATATATGCTCCAGAGATTTACCCAACCTCTGTCAGAA
CAACCGGAATTGGCGTGGCGAGCTCTGTAGGTAGGATTGGAGGCATCCTCTGTCCTCTCG
TCGCTGTTGCTCTAGTACACAGCTGCCAGCAGACGACAGCGATCCTTCTCTTTGAGCTTG
TAATCTTCCTCTCCGGGTTGGCTGTCTCATTTTTCCCTTTTGAGACAAAAGGCTGTAGAC
TTAACGACACCGAAGTCGTTATGAATTGATGAGGTGATTGTATTGTCATACCATTTTTTC
TGTGCTGAGTACGAAGTTCCCCTGTTAATTGAACATTTCCAGCAATGTGCTAAAAAAAAA
A

clustalw multiple alignements is not computed in this case