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Oryza sativa
cluster # 1642 cluster # 1642       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1642#0 length = 797 sequences # 2  

consensusID : consensus_1642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 797
fasta sequence
                              [CGACGAAGGTTACAACAACTCAACCGTATACCATTTTTGGGTGGAGGTACGATGCAAATAGTGCCAAACAGCATCCCATTCATCACAACCACATAAAATCTACCGAGGATAAAGCTGAAGTGGACAATTTATCCATCCACACAATGAGGGATGAGGAGATGGCTGCCGGGTCAGTATTTTTTATTGAGCAAGACTTGCACGTTGGAGCCAAGTTAAAGCACGATTTCCAGAAGAGACCCACAGTTCCCTTGTTATCATCTGAGATTGCCGAGTCTATTCCTTTCTCAATGGATAAATACCATGAAATACTTAACCGTTTTTCCATAAAACCTGAGTCTGCTGAAGCAACAATCATACAGGAGACCCTCTCTATCTGTTTGGAAAGACCAAGAGTAAAGATCGAAAACAGAACTTGTGCCCAATCCATGGAGTCCTTGGTAAATTTCGTGGTGCAAGAGTTGGGAACAAATGATATCAAGGTAACAATGATGAACAATTTAAACAAGATCCATTCAGGAATTAAAGAATATGTAGTTACAAAACTAAAGAAGATGTCAACCGGCCTTGATGGTAACTCCATGGTGACATGCCATAGGATGAACTACCCATACGTTGTCTATTACTGCCACCACCAACGCGCCATCAGCCTCTTCTCTGTCACCCTCATCGACAACAAGGGTGTAGCCGTGGACACGTCTGCCATCTGCCACTATGAAACCTACGCATGGCAACCAAATGTTCCCGGCCCTTCGGGACCTCAACATCCAACCCGGTGATTTCCCGGTTTGGCATTTCTC]

[+] EMBL BE040409             [CGACGAAGGTTACAACAACTCAACCGTATACCATTTTTGGGTGGAGGTACGATGCAAATAGTGCCAAACAGCATCCCATTCATCACAACCACATAAAATCTACCGAGGATAAAGCTGAAGTGGACAATTTATCCATCCACACAATGAGGGATGAGGAGATGGCTGCCGGGTCAGTATTTTTTATTGAGCAAGACTTGCACGTTGGAGCCAAGTTAAAGCACGATTTCCAGAAGAGACCCACAGTTCCCTTGTTATCATCTGAGATTGCCGAGTCTATTCCTTTCTCAATGGATAAATACCATGAAATACTTAACCGTTTTTCCATAAAACCTGAGTCTGCTGAAGCAACAATCATACAGGAGACCCTCTCTATCTGTTTGGAAAGACCAAGAGTAAAGATCGAAAACAGAACTTGTGCCCAATCCATGGAGTCCTTGGTAAATTTCGTGGTGCAAGAGTTGGGAACAAATGATATCAAGGTAACAATGATGAACAATTTAAACAAGATCCATTCAGGAATTAAAGAATATGTAGTTACAAAACTAAAGAAGATGTCAACCGGCCTTGATGGTAACTCCATGGTGACATGCCATAGGATGAACTACCCATACGTTGTCTATTACTGCCACCACCAACGCGCCATCAGCCTCTTCTCTGTCACCCTCATCGACAACAAGGGTGTAGCCGTGGACACGTCTGCCATCTGCCACTATGAAACCTACGCATGGCAACCAAATGTTCCCGGCCCTTCGGGACCTCAACATCCAACCCGGTGATTTCCCGGTTTGGCATTTCTC]
[+] EMBL BE040408             [gGACGAAGGTTACAACAACTCAACCGTATACCATTTTTGGGTGGAGGTACGATGCAAATAGTGCCAAACAGCATCCCATTCATCACAACCACATAAAATCTACCGAGGATAAAGCTGAAGTGGACAATTTATCCATCCACACAATGAGGGATGAGGAGATGGCTGCCGGGTCAGTATTTTTTATTGAGCAAGACTTGCACGTTGGAGCCAAGTTAAAGCACGATTTCCAGAAGAGACCCACAGTTCCCTTGTTATCATCTGAGATTGCCGAGTCTATTCCTTTCTCAATGGATAAATACCATGAAATACTTAACCGTTTTTCCATAAAACCTGAGTCTGCTGAAGCAACAATCATACAGGAGACCCTCTCTATCTGTTTGGAAAGACCAAGAGTAAAGATCGAAAACAGAACTTGTGCCCAATCCATGGAGTCCTTGGTAAATTTCGTGGTGCAAGAGTTGGGAACAAATGATATCAAGGTAACAATGATGAACAATTTAAACAAGATCCATTCAGGAATTAAAGAATATGTAGTTACAAAACTAAAGAAGATGTCAACCGGCCTTGATGGTAACTCCATGGTGACATGCCATAGGATGAACTACCCATACGTTGTCTATTACTGCCACCACCAACGCGCCATCAGCCTCTTCTCTGTCACCCTCATCGACAACAAGGGTGTAGCCGTGGACACGTCTGGCATCTGCCACTATGACACCTACGCATGGGCACCCAATGTT CCGGCCCTTCCGTACCTC ACATTC ACCCGGTGATTTCCCGtctg          ]


>consensus_1642#0 CGACGAAGGTTACAACAACTCAACCGTATACCATTTTTGGGTGGAGGTACGATGCAAATA GTGCCAAACAGCATCCCATTCATCACAACCACATAAAATCTACCGAGGATAAAGCTGAAG TGGACAATTTATCCATCCACACAATGAGGGATGAGGAGATGGCTGCCGGGTCAGTATTTT TTATTGAGCAAGACTTGCACGTTGGAGCCAAGTTAAAGCACGATTTCCAGAAGAGACCCA CAGTTCCCTTGTTATCATCTGAGATTGCCGAGTCTATTCCTTTCTCAATGGATAAATACC ATGAAATACTTAACCGTTTTTCCATAAAACCTGAGTCTGCTGAAGCAACAATCATACAGG AGACCCTCTCTATCTGTTTGGAAAGACCAAGAGTAAAGATCGAAAACAGAACTTGTGCCC AATCCATGGAGTCCTTGGTAAATTTCGTGGTGCAAGAGTTGGGAACAAATGATATCAAGG TAACAATGATGAACAATTTAAACAAGATCCATTCAGGAATTAAAGAATATGTAGTTACAA AACTAAAGAAGATGTCAACCGGCCTTGATGGTAACTCCATGGTGACATGCCATAGGATGA ACTACCCATACGTTGTCTATTACTGCCACCACCAACGCGCCATCAGCCTCTTCTCTGTCA CCCTCATCGACAACAAGGGTGTAGCCGTGGACACGTCTGCCATCTGCCACTATGAAACCT ACGCATGGCAACCAAATGTTCCCGGCCCTTCGGGACCTCAACATCCAACCCGGTGATTTC CCGGTTTGGCATTTCTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)