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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16443#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2033 fasta sequence
[GAGAGGAGGAAGAAGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC-GGTGCTACGACTTCTGGCTGGA-CTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGCTGCTATTCGTCGTAGGGA-GGAGGCGGCAAAGG-AGAAGGCTGAGGGAGCTCCTGCTGTTTCAGCTCGCCGCCGGTGACCCAGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCAAACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCTCCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCTCCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTCCGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTCCGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGCGGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCCGGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGCGCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCCGCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCATTGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCAGATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGTGGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGCGAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAGATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGAGCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGATGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAAAATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGTTCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGATGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTCCATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGAGAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCACAGAAGGGCCATTTAAGGGTCATCTCTGTGCTGAGCCATCTGTCGATCGGCTGAGGACTTTGATGAGACATGTATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGAGAGGTTTTCACCAGCAATCGTTGCAACGATTGTTGCTGATAAGATACAACAGGCGCTTGCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGATGTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGGAGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTAT]
[+] EMBL AK121536 [GAGAGGAGGAAGAAGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGA CTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGCTGCTATTCGTCGTAGGGA GGAGGCGGCAAAGG AGAAGGCTGAGGGAGCTCCTGCTGTTTCAGCTCGCCGCCGGTGACCCAGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCAAACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCTCCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCTCCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTCCGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTCCGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGCGGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCCGGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGCGCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCCGCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCATTGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCAGATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGTGGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGCGAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAGATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGAGCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGATGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAAAATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGTTCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGATGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTCCATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGAGAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCACAGAAGGGCCATTTAAGGGTCATCTCTGTGCTGAGCCATCTGTCGATCGGCTGAGGACTTTGATGAGACATGTATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGAGAGGTTTTCACCAGCAATCGTTGCAACGATTGTTGCTGATAAGATACAACAGGCGCTTGCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGATGTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGGAGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTAT]
[+] EMBL OSS15728A [ AGAAGAGGCGGGCANCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTNCGATNGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTNGCTGGA CTTCAGCGAGTGTATGAGCCGCTNNCGNCANCCCACCGACTTCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAA NTAAGAGCTGCTATTCGTCGTAGGGAGGGAGG ]
[+] EMBL OS1321736 [ AGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGA CTTCAGCGAGTNTATNANCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTNCCTCCACCACTCCAAGGAGTTCCAGCNCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGCTGCTATTCGTCGTAGGGA GGAGGCGGCAAAGGAAGAAGGCTTAGGGAG ]
[+] EMBL C73274 [ GAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCAATGGCGTCCGGNTGGGGCATCANCGGGAACAAGGGGC GGTGCTACGANTTCTGGCTGGA CTTCAGCAAGTTTATGACCCGCTGCCGCCAGCCCACCGANTGCGGCCTCCTCCGGAAGGACTACCTCGATTNCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGANTCTACAAGGAGGAGCAACGTAAGTAAAGANCTGCTATTCGTCGTAGGGA GGA ]
[+] EMBL AA751298 [ GAGGCGGGCA SGAGGAGGGAGGAGATCGGCGGCGA SGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGCAGGTGCTACGACTTCTGGCTGGAGCTTCAGCGAGTGCATGAGCCGCTGCCGCCAGCCCACCGACTkc ]
consensusID : consensus_16443#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1866 fasta sequence
[AGGATGGCATTCTACTGTTCGTGCTGGGTCTCGCCACCTGCCGATCTGCCTCGCCGCCGACGAGAGGAGTGAGCTCGCCGCCGGTGACCCAGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCAAACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCTCCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCTCCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTCCGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTCCGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGCGGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCCGGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGCGCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCCGCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCATTGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCAGATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGTGGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGCGAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAGATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGAGCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGATGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAAAATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGTTCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGATGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTCCATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGAGAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCACAGAAGGGCCATTTAAGGGTCATCTCTGTGCTGAGCCATCTGTCGATCGGCTGAGGACTTTGATGAGACATGTATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGAGAGGTTTTCACCAGCAATCGTTGCAACGATTGTTGCTGATAAGATACAACAGGCGCTTGCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGATGTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGGAGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTATTTTTGCCTTTATGCCATCATGAGTTGAAATGTAAAATGTTCTCAAAGCATGTTATGGCTTCACATTGTGATTTGTGAGTGTCTTAATTAATTTAATGCTCTCA]
[+] EMBL AK070245 [AGGATGGCATTCTACTGTTCGTGCTGGGTCTCGCCACCTGCCGATCTGCCTCGCCGCCGACGAGAGGAGTGAGCTCGCCGCCGGTGACCCAGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCAAACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCTCCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCTCCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTCCGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTCCGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGCGGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCCGGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGCGCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCCGCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCATTGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCAGATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGTGGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGCGAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAGATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGAGCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGATGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAAAATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGTTCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGATGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTCCATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGAGAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCACAGAAGGGCCATTTAAGGGTCATCTCTGTGCTGAGCCATCTGTCGATCGGCTGAGGACTTTGATGAGACATGTATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGAGAGGTTTTCACCAGCAATCGTTGCAACGATTGTTGCTGATAAGATACAACAGGCGCTTGCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGATGTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGGAGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTATTTTTGCCTTTATGCCATCATGAGTTGAAATGTAAAATGTTCTCAAAGCATGTTATGGCTTCACATTGTGATTTGTGAGTGTCTTAATTAATTTAATGCTCTCA]
consensusID : consensus_16443#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 619 fasta sequence
[GGAGACGAGAGGAGGAAGAAGAGGCGGGCA-GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC-GGTGCTACGACTTCTGGCTGGACTTCAGC-GAGTGTATGAGCCGCTGCC-GCC-AGCC-CACC-GA-CTGC-G-GCCTCCTCCGGGAGGAC-TACCTCGAGTGCCTCC-ACCACTCCAAGGAGTTCCA--GCG-CAGGAACA-GAATC-TA-CAAGGAGGAGCAACGTAAGTTAAGAGCTGC-TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC-TGAGGGAGC-TCCTGC-T-GTTTCAGCTCAGCA-TTAGCCAC-TCCGATAAAATTCA-TGTGTG-C-TTTTTG-TTTGC-TGTCAAAAC-TTTGTTCTAC-TG-TGA-TGCTAAGAGCAAGGCAA-TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTT-CGTGCCTGTTTTGGATAATTTTGC-GATAATGATGGTTGGTTCGATCATCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK121358 [GGAGACGAGAGGAGGAAGAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCAT ]
[+] EMBL AU030679 [ cgGGAGGAAGAAGANNNGGGCA GCGAGGAGGGAGGAGATCGGCGGCGANCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTNCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTT CGTGCCTGTTTTGGATAATTTTGC GATAATGATGGTTGGTTCGATCATCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL OS1321887 [ AGGAAGAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAG TTC TATTCGTCCTA GGAGGAGGCCGCAAAGNAGAAGCT TTAGGGAAN TTCTTCTT GTTTAAG TCAACA TTAACCAN TCCat ]
[+] EMBL C27652 [ AAGAAGAGGCGGGCANGAG GGAGGGAGGAGATCGGCGGCGA CGGCGAGAGGGGANGAGAAGGTAGGTTGCGATGGCGTCCNNGTAGGGCATCAACGGGAACAAGGGGCAGGTGCTACGACTTCTGGCTGGACTTCAGCGGAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTNC G GCCTCCTCCGGGA GACTTACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTAC T NTTTCAACTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TT TGA TGCTAAGAGCAAGGCAT TAATTNCCCACCTTCAT ]
[+] EMBL AU063601 [ AAGAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGA CGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTNGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGA GAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAG CAC TTCGATAAAATTCA TGTGTT CTTTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TN TGA TGCTAAGAGCAA ]
[+] EMBL C74593 [ AGAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGTTCAGCA TTAGCCAC TNCGATAAAATTCA TGTGTG CTTTTTTG TTTGC TGTCAAAA TTTGGTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATT CCCACC ]
[+] EMBL AU065979 [ AGAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGA GAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGANAAGGC TNAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATNCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TGNTGA TCCTAAGACCAAGGCAA TAATTCCCAACCTTCATGTTGGACTACg ]
[+] EMBL AU064173 [ GAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GNC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACAGGAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGCTTATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGCTTCCTTC TNGTTTCAACTCAGCA TTAGCCACTTCCG TNAAAATCA AGTGTG C TTTTTtnttt ]
[+] EMBL AU065063 [ GAAGAGGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGCTTNAGGGAGC TNCTGC T GTTTCAGCTCAGCA TTAGCCAC TTCGATAAAATTCA TGTGTG C TTTTTG TTTTC TTTCAAAAC TTTGTTCTAC TT TGA T CTAAGAGCAA GCAA TAATTNCCCACCTT ]
[+] EMBL AU094197 [ AGGCGGGCA GCGA GAAGGAGGAGATCGNCGGCGAGCGGCGAGAGGGAAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAA GGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTT CGTGCCTGTTTTGGATAATTTTGC GATAATGATGGTTGGTTCGATCATCAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU029454 [ GGCGGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCATTTAGCCAC TCCGATAAAATTCA TGTGTGCC TTTTTGNTTTGC TGTAAAAACTTTTGTTCTAC TG TGATTGCTAA AGCAAGGNAATTAATTTCCC NCTTTATGTTGG ]
[+] EMBL BI798622 [ tGGGCA TCGA GAGGGAGGAGATC GCGGCGA CGGCGAGAGGGGAGGAGAAGTTA GTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAA GGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGCATGAGCCGCTGCCAGCCAAGCC CACCAGA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACAC AACTCTTTTCCCCTCTCACTCCATGACTTTGTTCTGTAaaaaa ]
[+] EMBL OSS11169A [ GGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGCTT GTTTCAACTCAGCA TTAGCCAC TCCGATAAAATTCATTGTGTG C TTTTTG TTTGCTTGTCAAAAC TTTGTTCTACTTG TGATTGTAAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACT TTTTNCCCTCTCAATCCATGACTTTNTCCTG ATCAAGGCGTTG ATAAA ]
[+] EMBL AU095790 [ GGGCA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG T ]
[+] EMBL CA756208 [ CA GCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCNAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATNCAGGCGTTGCATAAACCATCATGGTGATGAAGTTTT CGTGCCTGTTTTGGATAAnaaaaa ]
[-] EMBL CB964980 [ GAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGCATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCCAGGCAA TAATTCCCCCCCTTCA ]
[+] EMBL C74376 [ GGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGC GGTGCTACGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC N GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTNC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGT AAAAC TTTGTTCTAC TG TGA TGCTAAGANCAA GCAA TAATTCCCCACCTTCATGTTGGACTACAC AACTCT ]
[+] EMBL AU182795 [ CGACTTCTGGCTGGACTTCAGC GAGTGTATGAGCCGCTGCC GCC AGCC CACC GA CTGC G GCCTCCTCCGGGAGGAC TACCTCGAGTGCCTCC ACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATC TA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTT CGTGCCaaaaaaaa ]
[+] EMBL AU162138 [ ACTTCTGGCTGGAC TCAGC GAGTGTATGAGCCG TGCC GCC AGCCTCACC GANTTGCNGNGCCT CTCCGGGAGGAC TACCTCGAGTGCCTCCTACCACTCCAAGGAGTTCCA GCG CAGGAACA GAATCTTA CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAaaa ]
[+] EMBL AU223431 [ GA NTGC G GCCTCCTCCGGGAGGNC TACCTCGAGTGCCTCC CCCNCTCCAAGGAGTTCCA GCG CAGGAACA GAATT TT CAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTNGTCGTAGGGAGGAGGCGGCAAAGGANAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCNC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTNTAC TG TGA TGCTAANAGCAAGGCAA TAATTCCCCCCCTTCATGTTGGNCTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATNTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCCGTGCCTGTTTTGGATAATTTTGCGGATAATGATGGTTGGTTCGGTCCTCCAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU096795 [ agtTTCCAGNGCGTCAGGAACA GAATC TANCAAGGAGGAGCAACGTAAGTTAAGAGCTGC TATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAAGGC TGAGGGAGC TCCTGC T GTTTCAGCTCAGCA TTAGCCAC TCCGATAAAATTCA TGTGTG C TTTTTG TTTGC TGTCAAAAC TTTGTTCTAC TG TGA TGCTAAGAGCAAGGCAA TAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAA ]
consensusID : consensus_16443#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 613 fasta sequence
[CCCACGCGTCCGAGAAGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGCGGTGCTACGACTTCTGGCTGGACTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGC-TGCTATTCGTCGTAGGGAGGAGGCGG--CAAAGG-AGAAGGC-TGAGGGAGCTCCTGCTG-TTTCAGCTC-AGCATTAGCCACTCCGAT-AAAATTCATGTGTGCTTTTTGTTTGCTGTCAAAACTTTGTTCTACTGTGATGCTAAGAGCAAGGCAATAATTCCCC-ACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCGTGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCACGTTTAAAAAAAAAA]
[+] EMBL OSS11791A [CCCACGCGTCCGAGAAGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGCGGTGCTACGACTTCTGGCTGGACTTCAGCGAGTNTATAAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGCTTGCTATTCGTCGTAGGGAGGAGGCGG CAAAGG AGAAGGCTTGAGGGAGCTCCTGCTGTTTTCAGTTCAAGCATTAGCCACTCCGTTAAAAATTCATGTGTGTTTTTT ]
[+] EMBL AU095791 [ AGGAGATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGNTGGGGCATCAACGGGAACAAGGGGCGGTGCTACGA TTCTGGCTGGACTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGC TGCTATTCGTCGTAGGGAGGAGGCGG CAAAGG AGAAGGC TGAGGGAGCTCCTGCTG TTTCAGCTC AGCATTAGCCACTCCGAT AAAATTCATGTGTGCTTTTTGTTTGCTGTCAAAACTTTGTTCTACTGTGATGCTAAGAGCAAGGCAATAATTCCCC ACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCGTGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCACGTTTAAAAAAAAAA]
[+] EMBL AU092590 [ ATCGGCGGCGAGCGGCGAGAGGGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGCGGTGTTACGANTTCTGGCTGGACTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGC TGCTATTCGTCGTAGGGAGGAGGCGG CAAAGG AGAAGGC TGAGGGAGCTCCTGCTG TTTCAGCTC AGCATTAGCCACTCCGAT AAAATTCATGTGTGCTTTTTGTTTGCTGTCAAAACTTTGTTCTACTGTGATGCTAAGAGCAAGGCAATAATTCCCC NCCTTCATGTTGGANTACACAAACTNTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCGTGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCAaaaaa ]
[+] EMBL AU101742 [ CCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGC TGCTATTCGTCGTAGGGAGGAGGCGG CAAAGG AGAAGGC TGAGGGAGCTCCTGCTG TTTCAGCTC AGCATTAGCCACTCCGAT AAAATTCATGTGTGCTTTTTGTTTGCTGTCAAAACTTTGTTCTACTGTGATGCTAAGAGCAAGGCAATAATTCCCC ACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCGTGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCACGTTTAAAAAAAAAA]
[+] EMBL AU095824 [ CGTCGTAGGGAGGAGGCNGTNCAAAGGTAGAAGGC TGAGGGAGCTCCTGCTG TTTCAGCTC AGCATTAGCCACTCCGAT AAAATTCATGTGTGCTTTTTGTTTGCTGTCAAAACTTTGTTCTACTGTGATGCTAAGAGCAAGGCAATAATTCCCCNACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTCCATGACTTTGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAAGTTTTCGTGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCACGTTTAAAAAAAAA ]
consensusID : consensus_16443#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 204 fasta sequence
[CTGTGCTGAGCCATCTGTCGATCGGCTGAGGNCNTTGATGAGACATGTATTCANNATCGAGAAGAAGCGAGGAGAAAAGTAAGANNGCAAGGGAGGATATGGTTGAGAGGTTTTCCCAGCAATCGTTAGCAACGATTGTTCTGATAAGATACACCTCAGTACTTAGTAGATCATACTGAATCNTACAACTCTACAGTAAACGTG]
[+] EMBL AA751096 [CTGTGCTGAGCCATCTGTCGATCGGCTGAGGNCNTTGATGAGACATGTATTCANNATCGAGAAGAAGCGAGGAGAAAAGTAAGANNGCAAGGGAGGATATGGTTGAGAGGTTTTCCCAGCAATCGTTAGCAACGATTGTTCTGATAAGATACACCTCAGTACTTAGTAGATCATACTGAATCNTACAACTCTACAGTAAACGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16443#1 ------------------------------------------------------------
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GAGAGGAGGAAGAAGAGGCGGGCAGCGAGGAGGGAGGAGATCGGCGGCGAGCGGCGAGAG 60
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 ------------------------------------------------------------
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GGGAGGAGAAGGTAGGTTGCGATGGCGTCCGGGTGGGGCATCAACGGGAACAAGGGGCGG 120
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 ------------------------------------------------------------
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TGCTACGACTTCTGGCTGGACTTCAGCGAGTGTATGAGCCGCTGCCGCCAGCCCACCGAC 180
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 ------------------------------------------------------------
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TGCGGCCTCCTCCGGGAGGACTACCTCGAGTGCCTCCACCACTCCAAGGAGTTCCAGCGC 240
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 -----------------------------AGGATGGCATTCTACTGTTCGT-GCTGGGTC 30
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 AGGAACAGAATCTACAAGGAGGAGCAACGTAAGTTAAGAGCTGCTATTCGTCGTAGGGAG 300
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 TCGCCACCTGCCGATCTGCCTCGCCGCCGACGAGAGGAGTGAGCTCGCCGCCGGTGACCC 90
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GAGGCGGCAAAGGAGAAGGCTGAGGGAGCTCCTGCTGTTTCAGCTCGCCGCCGGTGACCC 360
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 AGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCA 150
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 AGGCCAACCCAGCCGCCTCCTCCTCCTCCTCCCACTCGCCATGCCAGGCTCTCCGATCCA 420
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 AACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCT 210
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 AACGCCCCCTCCAGAACCCAAACCCCACCGCCGCCGCCGCCTCCTCTCGGTGCCGGCTCT 480
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 CCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCT 270
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 CCTCGCCGTCGCCGTCGCCGTCCTCCTCGCCACCTCCCCCAATCCTCTCCCCCGCCTCCT 540
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 CCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTC 330
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 CCGCTCCCTCCTCGGGCCAAATCCCTCCCTCCTCCGCTCGAAAGAGAGAGGTCCCCCGTC 600
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 CGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTC 390
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 CGGCACCTCGCCCGACGCGCGACGCCCACCATGTGTTCTATGGATGGCCCCTTTCGCCTC 660
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 CGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGC 450
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 CGGCGGTGGCTACTGCTCCGAGGCGTGGTCCTACGTCGCCTCGCTTGAGGAACACGCCGC 720
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCC 510
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GGACGCTGCCGCCGCGAACTTCACGCTCGCTATCGCCCACCACGGCGACCTGGAGTCGCC 780
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGC 570
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GGAGTTCTGGCTCGGCTTGCCCGAGGAGTCCAAGAACATGGCCTACAGGCTCGCCACCGC 840
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCC 630
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GCGGTGCGAGCTCTCCCGCGCCGTGGTTGTGTGCCACAGCGAGCCTGGCGCGTGGTACCC 900
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCAT 690
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GCCGATGTACGAGTCCCTGCCTTGCCCGCCCACCGGCTACGACGAGCCGGCTTTCGTCAT 960
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 TGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCA 750
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TGGACGCACAATGTTTGAGACTGACCGCGTCTCGCCGGAGCACGTCAGGCGGTGCAACCA 1020
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGT 810
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GATGGACGCCGTCTGGGTGCCGACGGAATTCCATGTGTCGACGTTCGTGAAGAGCGGGGT 1080
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGC 870
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GGATCCCTCCAAGGTCGTCAAGGTTGTGCAGGCTGTGGATGTAGGATTCTTCGATCCGGC 1140
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAG 930
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GAAGCACGCCGCCATTCCTTTGCCGATCGGTGTGCCTGTGATGGTGCCTGATGATTCAAG 1200
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 ATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGA 990
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 ATTGGACCCTGTTAACTCCAAAGGGAAAGGCTTTGTGTTCCTCAGTGTGTTCAAATGGGA 1260
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 GCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGA 1050
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GCAGAGGAAGGGGTGGGATGTGCTGCTCAGAGCTTTCTTGCAGGAGTTCTCTGGAGCCGA 1320
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 TGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAA 1110
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TGATGTTGTGCTTTACCTACTGATCAATGCTTACCACTCTGACACAGACTTCGATAGGAA 1380
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 AATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGT 1170
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 AATCCGTAGCTTCGTCAAAGATTCCAGCATTGAGAAGCCTATGGATGGATGGGCAGAAGT 1440
consensus_16443#2 ------------------------------------------------------------
consensus_16443#3 ------------------------------------------------------------
consensus_16443#1 TCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGA 1230
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TCGGCTGATCGATGAGCATATCCCACAGTCTGCTCTTCCAAGGTTGTACAAGGCTGCAGA 1500
consensus_16443#2 ------------------------GGAGACGAGAGGAGGAAGAAGAGGCGGGCAGCGAGG 36
consensus_16443#3 ----------------------------CCCACGCGTCCGAGAAGAGGCGGGCAGCGAGG 32
consensus_16443#1 TGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTC 1290
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 TGCCTTTGTGCTACCATCCCGTGGTGAGGGGTGGGGCAGGCCGGTGGTCGAAGCCATGTC 1560
consensus_16443#2 AGGGAGGAGATCGGCGGCGAGCGGCGAGAGG-GGAGGAGAAGGTAGGTTGCGATGGCGTC 95
consensus_16443#3 AGGGAGGAGATCGGCGGCGAGCGGCGAGAGG-GGAGGAGAAGGTAGGTTGCGATGGCGTC 91
consensus_16443#1 CATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGA 1350
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 CATGGAACTGCCGGTGATTGTGACGAATTGGTCAGGTCCAACAGAGTACTTGAATGAGGA 1620
consensus_16443#2 C--GGGTGGGGCATCAACGGGAACAAGGGGCGGTGCTACGACTTCTGGCTGGACTTCAGC 153
consensus_16443#3 C--GGGTGGGGCATCAACGGGAACAAGGGGCGGTGCTACGACTTCTGGCTGGACTTCAGC 149
consensus_16443#1 GAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCAC----AGAAGGGCCATTT- 1405
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GAATGGGTACCCATTGGACATTGACAGGCTGACTGAGGTCAC----AGAAGGGCCATTT- 1675
consensus_16443#2 GAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTC 213
consensus_16443#3 GAGTGTATGAGCCGCTGCCGCCAGCCCACCGACTGCGGCCTCCTCCGGGAGGACTACCTC 209
consensus_16443#1 AAGGGTCATCTCTGTGCTGAGCCAT-CTGTCGATCGGCTGAGGACTTTGATGAGACATGT 1464
consensus_16443#4 -----------CTGTGCTGAGCCAT-CTGTCGATCGGCTGAGGNCNTTGATGAGACATGT 48
consensus_16443#0 AAGGGTCATCTCTGTGCTGAGCCAT-CTGTCGATCGGCTGAGGACTTTGATGAGACATGT 1734
consensus_16443#2 GAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAA 273
consensus_16443#3 GAGTGCCTCCACCACTCCAAGGAGTTCCAGCGCAGGAACAGAATCTACAAGGAGGAGCAA 269
* * ** * * ** * * * ***
consensus_16443#1 ATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGA 1524
consensus_16443#4 ATTCANN-ATCGAGAAGAAGCGAGGAGAAAAG-TAAGANNGCAAGGGAGGATATGGTTGA 106
consensus_16443#0 ATTCAGTGATCGAGAAGAAGCGAGGAGAAAAGGTAAGAAGGCAAGGGAGGATATGGTTGA 1794
consensus_16443#2 CGTAAGTTAA-GAGCTGCTATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAA---GGCTGA 329
consensus_16443#3 CGTAAGTTAA-GAGCTGCTATTCGTCGTAGGGAGGAGGCGGCAAAGGAGAA---GGCTGA 325
* * * *** * * * * * ** **** **** * ** ***
consensus_16443#1 GAGGTTTTCACCAGCAATCGTT--GCAACGATTGTTGCTGATAAGATACAACAGGCGCTT 1582
consensus_16443#4 GAGGTTTTC-CCAGCAATCGTTA-GCAACGATTGTT-CTGATAAGATACACC-------- 155
consensus_16443#0 GAGGTTTTCACCAGCAATCGTT--GCAACGATTGTTGCTGATAAGATACAACAGGCGCTT 1852
consensus_16443#2 GGGAGCTCCTGCTGTTTCAGCTCAGCATTAGCCACT-CCGATAAAATTCA---------- 378
consensus_16443#3 GGGAGCTCCTGCTGTTTCAGCTCAGCATTAGCCACT-CCGATAAAATTCA---------- 374
* * * * * * * * *** * * ***** ** **
consensus_16443#1 GCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGAT 1642
consensus_16443#4 -TCAGTACTTAGTAGATCAT--ACTGAATCNTAC-----AACTCTACAGTAAACGTG--- 204
consensus_16443#0 GCCAGTACTTAGTAGATGGATAACTGAAATGTGATTACAAACTCTAACCAGAAAGTGGAT 1912
consensus_16443#2 -TGTGTGCTTT-TTGTTTGCTGTCAAAACTTTG--------TTCTACTGTGATGCTAAGA 428
consensus_16443#3 -TGTGTGCTTT-TTGTTTGCTGTCAAAACTTTG--------TTCTACTGTGATGCTAAGA 424
** *** * * * * ** * **** * *
consensus_16443#1 GTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGG 1702
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 GTATATCATGCACCGCTCATGTACGTATGACAATCTCATTACTCACTGCTTTTTCATAGG 1972
consensus_16443#2 GCAAGGCAATAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTC 488
consensus_16443#3 GCAAGGCAATAATTCCCCACCTTCATGTTGGACTACACAAACTCTTTTCCCCTCTCACTC 484
consensus_16443#1 AGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTA 1762
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 AGTTACGTACTTATGTATATCTGTTTCTTGCAATAATGAGATGAGTGGCGACTGTGTTTA 2032
consensus_16443#2 CATGACTT--TGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAA-GTTTTCG 545
consensus_16443#3 CATGACTT--TGATCTGTATCAAGGCGTTGCATAAACCATCATGGTGATGAA-GTTTTCG 541
consensus_16443#1 TTTTTGCCTTTATGCCATCATGAGTTGAAATGTAAAATGTTCTCAAAGCATGTTATGGCT 1822
consensus_16443#4 ------------------------------------------------------------
consensus_16443#0 T----------------------------------------------------------- 2033
consensus_16443#2 TGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCAAAAAAAAAAAAA 605
consensus_16443#3 TGCCTGTTTTGGATAATTTTGCGATAATGATGGTTGGTTCGATCATCATATTTTGCACGT 601
consensus_16443#1 TCACATTGTGATTTGTGAGTGTCTTAATTAATTTAATGCTCTCA 1866
consensus_16443#4 --------------------------------------------
consensus_16443#0 --------------------------------------------
consensus_16443#2 AAAAAAAAAAAAAA------------------------------ 619
consensus_16443#3 TTAAAAAAAAAA-------------------------------- 613
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||