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Oryza sativa
cluster # 16476 cluster # 16476       Sequences # 34       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16476#0 length = 919 sequences # 14  
consensus_16476#1 length = 862 sequences # 12  
consensus_16476#2 length = 772 sequences # 4  
consensus_16476#3 length = 603 sequences # 2  
consensus_16476#4 length = 488 sequences # 1  
consensus_16476#5 length = 172 sequences # 1  

consensusID : consensus_16476#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 919
fasta sequence
                              [AGGGGAGGAGCCAGCCGCCGCCGCCTCGGCCGCGCACTCCCAACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCA-AGCGAGAGAGGCTTCCGCCGT-CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC-GGCGGTC-AAGAGCCCGGCATCTCTAAGCTTCTTCAG-CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT-ACATCCTT-GATGCCGCCGAGACCGCTGGAGTAGAGCTTCC-CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCA-GGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC-AAAAAACTCTCAATGTCGTCGGCAAGGTCCA-TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA-TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA-ATGGTAATACTAGCTAGT-CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF330624             [AGGGGAGGAGCCAGCCGCCGCCGCCTCGGCCGCGCACTCCCAACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGNCATGGCTACCTANCAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTT GATGCCGCCGAGACCGCTGGAGTAGAGCTTCC CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTC                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK121063             [                                   ACTCCCAACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTT GATGCCGCCGAGACCGCTGGAGTAGAGCTTCC CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCA GGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGCAAAAAAACTCTCAATGTCGTCGGCAAGGTCCA TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATAT                                                 ]
[+] EMBL CF327111             [                                   ACTCCCAACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTT GATGCCGCCGAGACCGCTGGAGTAGAGCTTCC CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCA GGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGCAAAAAAACTCTCAATGTCGTCGGCAAGGTCC                                                                                                                                                                                                                                                     ]
[+] EMBL OSC3331              [                                               TCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAG CA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTTCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACANCAGAAGGGCAAGAGCACGAGTTCGAGGNTCCGGATGACACCT ACATCCTT GATGCCGCCGAGACCGNTTGAGTAGAGTTTCC TAATTAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU163119             [                                                        CTTCCCACTACTCTCGCGAGGAGGAAAGCGAAG CA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGNGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GNCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAGNCAAAGGCATGCAGTTTCCAAGNCTTNAGGCtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C26892               [                                                                TACTCTCGCGAGGAGGAAAGCGAAG CA AGCGAGAGAGGCTTCCGCCGT CGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGNCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTT GATGCCGNCGAGACCGCTGGAGTAGAG TTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C27364               [                                                                 ACTCTCGCGAGGAGGAAAGCGA  CNANAGCGAGAGAGGCTTCCG CGTNCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGC GGCGGTC AAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGG CTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACANCT ACATCCTT GATGCCGCCGAGACCGCTng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU082970             [                                                                                                                                                                                                     CAATGCTAGAACTCAGGCNTCCAAGGTGCC GCCGGTCAAAGAGCCCGGCATCTCTAAGCTTCTTCAG CCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTT GATGCCGCCGAGACCGCTGGAGTAGAGCTTCC CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCA GGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCA TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCA  AAAAA                               ]
[+] EMBL BI795217             [                                                                                                                                                                                                                                                                                                                                                                                     AGTTCGAGGCTCCGGATGACACCTGACATGCTTGGATGCCGCCGAGACCGCTGGAGTAGAGCTTCCACTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCATGGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGA AAAAAACTCTCAATGTCGTCGGCAAGGTCCA TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATAC ATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCA  GTACTAAAAAAAAAA                     ]
[+] EMBL CB096798             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCC CTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCA GGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCA TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTT                                        ]
[+] EMBL BI798848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCC AGAGGC AAAAAACTCTCAATGTCGTCGGC AGGTCCACTCGTGTGTACCAGTTGTCTCAACTCTCAATTAAACTCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCC  ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGC ATATTATTATCTTCA  AAAA                                ]
[+] EMBL BI799054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCC AGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCA TCGTGTGTACCAGTTGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCACATGGTAATACTAGCTAGTCCAATAATAACCAGCTGCTATGGCGTAATAC ATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCA  AAAA                                ]
[+] EMBL AU092413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCA NCGTGTGTNCCAGTTGTCTCAACTCTCAATTAAA NCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGANCCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL OSAA31796            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  C AAAAAACTCTCAANGTCGTCGGCAAGGTCCA TCGNGTGTACCAGTNGTCTCAACTCTCAATTAAA TCGGACTTTGATGGTGGTTTTGAATGTNGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA ATGGTAATACTAGCTAGT CAATAATAACCAGCTGCTATGGCGTAANACAATTCGTGGTTTTGGATATAATTTGCAATATTATT                                             ]


>consensus_16476#0 AGGGGAGGAGCCAGCCGCCGCCGCCTCGGCCGCGCACTCCCAACTCCTCTCCTCTCCTTC CCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTC CCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTC ATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCC GGCATCTCTAAGCTTCTTCAGCCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAA GAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCA AGAGCACGAGTTCGAGGCTCCGGATGACACCTACATCCTTGATGCCGCCGAGACCGCTGG AGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGA GGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGA AGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGCAAAAAACTCT CAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGA CTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAG AGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATA CAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA



consensusID : consensus_16476#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 862
fasta sequence
                              [GTGCTCCATCATGTTGTAAATCTGTGCACTGAATATATATGCCTTGTGTGATATCCTAAACTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTC-TAAGCTT-CTTCAGCCAAGGCATGCA-GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA-AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT-ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC-TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC-GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG-CTATGTGCTGACATGTGT-CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC-AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATT]

[-] EMBL CB624027             [GTGCTCCATCATGTTGTAAATCTGTGCACTGAATATATATGCCTTGTGTGATATCCTAAACTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTC TAAGCTT CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATT]
[-] EMBL CB619168             [             TTGTAAATCTGTGCACTGAATATATATGCCTTGTGTGATATCCTAAACTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTC TAAGCTT CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTAGTGGTTT                    ]
[-] EMBL CB619133             [                                            nGTGTGATATCCTAAACTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTT TAAGCTT CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGACCCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTAGTGGTTT                    ]
[-] EMBL CB622654             [                                                                        TAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTC TAAGCTT CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATAT ]
[+] EMBL OSAA31660            [                                                                                                                                      nGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAANAGCCCGGCATCTC TAAGCTT CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAAACCGCTGGAGTA AAC TTCCCTACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI799743             [                                                                                                                                                                                                 AACTCAGCCCTCCAAGGTGCCGCCGGTCAAGAGCCCGGCATCTC TAAGCTT CTTCAGCCAAGGCATCCA GTTTCCAAGCCTGAA GCCTCCTCCAAGAAGCTTGACGTCTC GCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCC AGAGGC  AAAAACTCTCAATGTCGTCGGC AGGTCCATCGTGTGTACCCGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAAaaaa                                                                                                                                  ]
[+] EMBL BI797264             [                                                                                                                                                                                                                           TCAAGAGCCC GCATCTCGTAAGCTTGCTTCA CCAAGGCATCCATGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCCATGGCTACCTACAAGGTTATAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCGTTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCTGACCCGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCCTATGT CTGACATGTGTCCTCCTACCCTAAGTCCGAGTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGCC    AAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCCCTTCAATCGGACTCTGATGGTGGTTTTGAA                                                                                                                                      ]
[-] EMBL BE607460             [                                                                                                                                                                                                                                                      CTTCAGCCAAGGCATGCA GTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGT                                                                                                                                            ]
[-] EMBL CF330625             [                                                                                                                                                                                                                                                                                                                                TACAAGGTTA AGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCTNACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGCAAAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAGTCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAAaaaaa      ]
[+] EMBL AI978462             [                                                                                                                                                                                                                                                                                                                                                                                            CACCT ACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGC TTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAANNNGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCANTGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATNNNNNCTTTCGNNAGTATGCNNNNCAAGGT                                                                                                       ]
[-] EMBL AI978461             [                                                                                                                                                                                                                                                                                                                                                                                                                               gtnnnGC TTCCCTNCTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCA                                                                                ]
[+] EMBL AU166874             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTC GACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGG CTATGTGCTGACATGTGT CTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATATAAaaaaaaaa   ]


>consensus_16476#1 GTGCTCCATCATGTTGTAAATCTGTGCACTGAATATATATGCCTTGTGTGATATCCTAAA CTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTCCTTCTGGA TTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATGTGTGTCCT TGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGCATCTCTAA GCTTCTTCAGCCAAGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACG TCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGT TCGAGGCTCCGGATGACACCTACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCTTC CCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCG TCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGA CATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTT ACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGCAAAAAACTCTCAATGTCGTCG GCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTG GTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACC CAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGT TTTGGATATAATTTGCAATATT



consensusID : consensus_16476#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 772
fasta sequence
                              [AACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTCTTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAACCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCGCATGAACACCAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTG-TTTTTTTTTTCGATTTTTGTCAACTAGATCGTGAAATCGGGTGTTTAATCTATCAAGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTGAAGGGTGGGGAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGAGATACCGTTGGCTTATATATCATCTCCATTCCTCGCTTTTTGGTACTCCGGT]

[+] EMBL CB624026             [AACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTCTTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAACCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCGCATGAACACCAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTG TTTTTTTTTTCGATTTTTGTCAACTAGATCGTGAAATCGGGTGTTTAATCTATCAAGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTGAAGGGTGGGGAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGAGATACCGTTGGCTTATATATCATCTCCATTCCTCGCTTTTTGGTACTCCGGT]
[+] EMBL CB622653             [AACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTCTTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAACCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCGCATGAACACCAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTG TTTTTTTTTTCGATTTTTGTCAACTAGATCGTGAAATCGGGTGTTTAATCTATCAAGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTGAAGGGTGGGGAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGAGATACCGTTGGCTTATATATCATCTCCATTCC                    ]
[+] EMBL CB619167             [AACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTCTTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAACCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCGCATGAACACCAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTGTTTTTTTTTTTCGATTTTTGTCAACTAGATCGTGAAATCGGGTGTTTAATCTATCAAGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTGAAGGGTGGGGAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGAGATACCGTTGGCTTATAT                                  ]
[+] EMBL CB619132             [AACTCTTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTCTTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAACCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCTCATGAACACCATAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTGTTTTTTTTTTTCGATTTTTGTCAACTATATCGTGAAATCGGGTGGTTAATCTATCGCGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTGAAGGGTGGGGAGCGCTAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGAGATACCGCTGGCTT                                      ]


>consensus_16476#2 AACTCCTCTCCTCTCCTTCCCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGA GGCTTCCGCCGTCGCCTTCCCCTTCGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTT CCTGTGGGTGGGTTTGACCTCTTCGGTTCTCCCTGTTCGGTGAGGGTTTGCTTGGGGTTT TGAGGTGGAGGATCTCTCGTCTCGTCTCGTCTCTCGGGTGGATGGGATCTCGTGTTCCTC TTCCTTGGAGAAGAGGAGGAGGAGGAGGATCGTGTGGGGTTGGCGCGTTGCTGTTTGGAA CCATGGTTTTGCGCTAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTT CTCTATGAACATGTCTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTC TGTCTTCGCATGAACACCAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTG ATTCGTGTTTTTTTTTTCGATTTTTGTCAACTAGATCGTGAAATCGGGTGTTTAATCTAT CAAGTTGGTGAGAAATTTTAGAAAGAAACCGATTGTGTCGTGTCCATGGAGCTTCGAGTG AAGGGTGGGGAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGG CCTTCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTCCATTTATTGGTAGA GATACCGTTGGCTTATATATCATCTCCATTCCTCGCTTTTTGGTACTCCGGT



consensusID : consensus_16476#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 603
fasta sequence
                              [AATGAAGGGTGGGTTTTTTAAGTGTATTCGGCCGGGGATAGCAGTTTCCGAAGCAGGAAGGCTTCCGCAAAAAGACTAAGTTCTCGACGATGTC-ACCTACGAAGGTAAAGCTCTTCACACCA-AAGGAGCAAGAGCGCGAGTTCGAGGCTCGGGATGAC-TCATACATCCCTGATGCCGCGGAGACCGCTGAAGTAGAGCTTCCCTACACATGCGGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCA-GTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCA-AGAGGCAAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCCATGGTAATACTAGCTAGTCAATAATAACCCAAAAAAAAAA]

[-] EMBL BE040264             [AATGAAGGGTGGGTTTTTTAAGTGTATTCGGCCGGGGATAGCAGTTTCCGAAGCAGGAAGGCTTCCGCAAAAAGACTAAGTTCTCGACGATGTC ACCTACGAAGGTAAAGCTCTTCACACCA AAGGAGCAAGAGCGCGAGTTCGAGGCTCGGGATGAC TCATACATCCCTGATGCCGCGGAGACCGCTGAAGTAGAGCTTCCCTACACATGCGGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCA GTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCA AGAGGCAAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTC                                                                                                                                      ]
[+] EMBL BI810636             [                                                                        agctgacGTCCTCGGCAATGGCTACCTAC AAGGTTAAGCTCATCACACCAGAAGG GCAAGAGCACGAGTTCGAGGCTCCGGATGACAACCTACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCACGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCACAGAGGCAAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCCGTTGTCTCAACTCTCAATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCCATGGTAATACTAGCTAGTCAATAATAACCCAAAAAAAAAA]


>consensus_16476#3 AATGAAGGGTGGGTTTTTTAAGTGTATTCGGCCGGGGATAGCAGTTTCCGAAGCAGGAAG GCTTCCGCAAAAAGACTAAGTTCTCGACGATGTCACCTACGAAGGTAAAGCTCTTCACAC CAAAGGAGCAAGAGCGCGAGTTCGAGGCTCGGGATGACTCATACATCCCTGATGCCGCGG AGACCGCTGAAGTAGAGCTTCCCTACACATGCGGTGCTGGAGCATGCTCTACCTGTGCCG GTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGC AGGAAGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATA CTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTCTGCCAAGAGGC AAAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAA TTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGT TGGGGCTAAGAGATGGGAACCCCATGGTAATACTAGCTAGTCAATAATAACCCAAAAAAA AAA



consensusID : consensus_16476#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [AGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCNTACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTTTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTTTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTTTGCCAAGAGGCAAAAAAACTTTCAATGTTGTCGGCAAGGTCCATCGTGTGTACCAGTTGTTTCAACTTTCAATTAAATCGGACTTTGATGGTGGTTTTGAAAAAAAAAAAAA]

[-] EMBL CF327112             [AGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGATGACACCNTACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTTTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTTTCCTACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTTTTTGCCAAGAGGCAAAAAAACTTTCAATGTTGTCGGCAAGGTCCATCGTGTGTACCAGTTGTTTCAACTTTCAATTAAATCGGACTTTGATGGTGGTTTTGAAAAAAAAAAAAA]


>consensus_16476#4 AGGCATGCAGTTTCCAAGCCTGAAGGCCTCCTCCAAGAAGCTTGACGTCTCGGCAATGGC TACCTACAAGGTTAAGCTCATCACACCAGAAGGGCAAGAGCACGAGTTCGAGGCTCCGGA TGACACCNTACATCCTTGATGCCGCCGAGACCGCTGGAGTAGAGCTTCCCTACTCATGCC GTGCTGGAGCATGCTTTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGG ATGGATCATTCCTTGATGATGCGCAGCAGGAAGAAGGCTATGTGCTGACATGTGTTTCCT ACCCTAAGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTTACTAAGGTGCTT TTTCTTGAAAATTTTTTGCCAAGAGGCAAAAAAACTTTCAATGTTGTCGGCAAGGTCCAT CGTGTGTACCAGTTGTTTCAACTTTCAATTAAATCGGACTTTGATGGTGGTTTTGAAAAA AAAAAAAA



consensusID : consensus_16476#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 172
fasta sequence
                              [ATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU161991             [ATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGGTTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTATGGCGTAATACAATTCGTGGTTTTGGATAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_16476#5 ATTAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAGTATGCGTTTCAAGG TTGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCT ATGGCGTAATACAATTCGTGGTTTTGGATAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16476#0      AGGGGAGGAGCCAGCCGCCGCCGCCTCGGCCGCGCACTCCCAACTCCTCTCCTCTCCTTC 60
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      --------GTGCTCCATCATGTTGTAAATCTGTGCACTGAATATATATGCCTTGTGTGAT 52
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      ------------------------------------------------------------
consensus_16476#2      ------------------------------------------------------------
                                                                                   

consensus_16476#0      CCACTACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTC 120
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      ATCCTAAACTCTGTTCAAGTTAGAGCATGGCTTTTAATGGTGGAGGTACTTACTGTATTC 112
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      ------------------------------------------------------------
consensus_16476#2      ------------------------------------AACTCCTCTCCTCTCCTTCCCACT 24
                                                                                   

consensus_16476#0      CCCTTCGCCTTCCGATCGGTCGCGAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTC 180
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      CTTCTGGATTTGAACAATTCTAGGTTTCAAGATGGCGACGTGCACACTTGCAACTTCATG 172
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      ------------------------------------------------------------
consensus_16476#2      ACTCTCGCGAGGAGGAAAGCGAAGCCAAGCGAGAGAGGCTTCCGCCGTCGCCTTCCCCTT 84
                                                                                   

consensus_16476#0      ATGTGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCC 240
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      TGTGTCCTTGAGCAATGCTAGAACTCAGGCCTCCAAGGTGGCGGCGGTCAAGAGCCCGGC 232
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      -----------------------------------------------AATGAAGGGTGGG 13
consensus_16476#2      CGCCTTCCGATCGGTCGCGAGGTATATCCCCTTGTTCCTGTGGGTGGGTTTGACCTCTTC 144
                                                                                   

consensus_16476#0      GGCATCTCTAAGCTTCTTCAGCCAAGGCA---TGCAGTTTCCAAGCCTGAAGGCCTCCTC 297
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      ATCTCTAAGCTTCTTCAGCCAAGGCATGC---AGTTTCCAAGCCTGAAGGCCTCCTCCAA 289
consensus_16476#4      ---------------------AGGCATGC---AGTTTCCAAGCCTGAAGGCCTCCTCCAA 36
consensus_16476#3      TTTTTTAAGTGTATTCGGCCGGGGATAGC---AGTTTCCGAAGCAGGAAGGCTTCCGCAA 70
consensus_16476#2      GGTTCT--CCCTGTTCGGTGAGGGTTTGCTTGGGGTTTTGAGGTGGAGGATCTCTCGTCT 202
                                                                                   

consensus_16476#0      CAAGAAGCTTGACGTCTCGGCAATGGCTACCTACAAGGTTAAGCTCATCACACCAGAAGG 357
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      GAAGCTTGACGTCTCGGCAATGGCTACCTAC-AAGGTTAAGCTCATCACACCAGAAGGGC 348
consensus_16476#4      GAAGCTTGACGTCTCGGCAATGGCTACCTAC-AAGGTTAAGCTCATCACACCAGAAGGGC 95
consensus_16476#3      AAAGACTAAGTTCTCGACGATGTC-ACCTACGAAGGTAAAGCTCTTCACACCAAAGGAGC 129
consensus_16476#2      C--GTCTCGTCTCTCGGGTGGATGGGATCTC----GTGTTCCTCTTCCTTGGAGAAGAGG 256
                                                                                   

consensus_16476#0      GCAAGAGCACGAGTTCGAGGCTCCGGATGACACCTACATCCTTGATGCCGCCGAGA-CCG 416
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      AAGAGCACGAGTTCGAGGCTCCGGATGACACCT-ACATCCTTGATGCCGCCGAGAC-CGC 406
consensus_16476#4      AAGAGCACGAGTTCGAGGCTCCGGATGACACCNTACATCCTTGATGCCGCCGAGAC-CGC 154
consensus_16476#3      AAGAGCGCGAGTTCGAGGCTCGGGATGACTCAT-ACATCCCTGATGCCGCGGAGAC-CGC 187
consensus_16476#2      AGGAGGAGGAGGATCGTG-TGGGGTTGGCGCGTTGC-TGTTTGGAACCATGGTTTTGCGC 314
                                                                                   

consensus_16476#0      CTGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTCTA-CCTGTGCCGGTAAG 475
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      TGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTCTAC-CTGTGCCGGTAAGA 465
consensus_16476#4      TGGAGTAGAGCTTCCCTACTCATGCCGTGCTGGAGCATGCTTTAC-CTGTGCCGGTAAGA 213
consensus_16476#3      TGAAGTAGAGCTTCCCTACACATGCGGTGCTGGAGCATGCTCTAC-CTGTGCCGGTAAGA 246
consensus_16476#2      TAGGATGATTAGATTGGATGAAAACGATGCTTAGATTTGGGCCGTTCTCTATGAACATGT 374
                                                                                   

consensus_16476#0      ATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGAT-GCGCAGCAGGA 534
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      TCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATG-CGCAGCAGGAA 524
consensus_16476#4      TCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATG-CGCAGCAGGAA 272
consensus_16476#3      TCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCATTCCTTGATGATG-CGCAGCAGGAA 305
consensus_16476#2      CTGTTTTTTTTTCTATTTGGTGGCGAGATTTAGGTTTCCGGGATTCTGTCTTCGCATGAA 434
                                                                                   

consensus_16476#0      AGAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCA 594
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      GAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCAC 584
consensus_16476#4      GAAGGCTATGTGCTGACATGTGTTTCCTACCCTAAGTCCGACTGCGTCATCCATACTCAC 332
consensus_16476#3      GAAGGCTATGTGCTGACATGTGTCTCCTACCCTAAGTCCGACTGCGTCATCCATACTCAC 365
consensus_16476#2      CAC--CAGAGGAATTCAATCCACATGCACGGTTACATCTAGCTTGTTGATTCGTGTTTTT 492
                                                                                   

consensus_16476#0      CAAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATT--TTCTGCCAAG-AGGCA 651
consensus_16476#5      ------------------------------------------------------------
consensus_16476#1      AAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTT--TCTGCCAAGA-GGCAA 641
consensus_16476#4      AAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTT--TTTGCCAAGA-GGCAA 389
consensus_16476#3      AAGGAAGGAGACCTTTACTAAGGTGCTTTTTCTTGAAAATTT--TCTGCCAAGA-GGCAA 422
consensus_16476#2      TTTTTCGATTTTTGTCAACTAGAT-CGTGAAATCGGGTGTTTAATCTATCAAGTTGGTGA 551
                                                                                   

consensus_16476#0      AAAAACTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAAT 711
consensus_16476#5      ----------------------------------------------------------AT 2
consensus_16476#1      AAAA-CTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAAT 700
consensus_16476#4      AAAAACTTTCAATGTTGTCGGCAAGGTCCATCGTGTGTACCAGTTGTTTCAACTTTCAAT 449
consensus_16476#3      AAAA-CTCTCAATGTCGTCGGCAAGGTCCATCGTGTGTACCAGTTGTCTCAACTCTCAAT 481
consensus_16476#2      GAAATTTTAGAAAGAAACCGATTGTGTC------GTGTCCATGGAGCTTCGAGTGAAGGG 605
                                                                                   

consensus_16476#0      TAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAG-TATGCGTTTCAAGGT 770
consensus_16476#5      TAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAG-TATGCGTTTCAAGGT 61
consensus_16476#1      TAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAG-TATGCGTTTCAAGGT 759
consensus_16476#4      TAAATCGGACTTTGATGGTGGTTTTGAAAAAAAAAAAAA--------------------- 488
consensus_16476#3      TAAATCGGACTTTGATGGTGGTTTTGAATGTTGTCTTTCGTTAG-TATGCGTTTCAAGGT 540
consensus_16476#2      TGGG--GAGCGCAAGCAATGCCTGCCTTTCTCATACTGCTCCAGATAGTAATTGCGGCCT 663
                       *     *  *        **  *                                     

consensus_16476#0      TGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTA 830
consensus_16476#5      TGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTA 121
consensus_16476#1      TGGGGCTAAGAGATGGGAACCCAATGGTAATACTAGCTAGTCAATAATAACCAGCTGCTA 819
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      TGGGGCTAAGAGATGGGAACCCCATGGTAATACTAGCTAGTCAATAATAACCCAAAAAAA 600
consensus_16476#2      TCTCATGGAGGAATGGATGGCCCCTTGTGACCCTATTTCCTTC-CATTTATTGGTAGAGA 722
                                                                                   

consensus_16476#0      TGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATTATTATCTTCAAAAAAAA 890
consensus_16476#5      TGGCGTAATACAATTCGTGGTTTTGGATAAAA--------------------AAAAAAAA 161
consensus_16476#1      TGGCGTAATACAATTCGTGGTTTTGGATATAATTTGCAATATT----------------- 862
consensus_16476#4      ------------------------------------------------------------
consensus_16476#3      AAA--------------------------------------------------------- 603
consensus_16476#2      TACCGTTGGCTTATATATCATCTCCATTCCTCGCTTTTTGGTACTCCGGT---------- 772
                                                                                   

consensus_16476#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 919
consensus_16476#5      AAAAAAAAAAA------------------ 172
consensus_16476#1      -----------------------------
consensus_16476#4      -----------------------------
consensus_16476#3      -----------------------------
consensus_16476#2      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)