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Oryza sativa
cluster # 16479 cluster # 16479       Sequences # 34       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16479#0 length = 1020 sequences # 3  
consensus_16479#1 length = 1001 sequences # 26  
consensus_16479#2 length = 650 sequences # 3  
consensus_16479#3 length = 443 sequences # 1  
consensus_16479#4 length = 267 sequences # 1  

consensusID : consensus_16479#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1020
fasta sequence
                              [TTTTTTTGGTTTTTTTTTTTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAAATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGATCTAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAACCTGGGAAGAAGCAACGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAACTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAGGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCAGTAACTGTAATTTTAGGAAAAAAGTAAAACCATTTTAGACTTTGTTCTTTGTGATATTTGATAATGTGAACTCATATACTGGCTCTTACTCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGCCGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATCTGGTAACATATACAATATCACATCTGTTATAACTGTTAATTCTGAAAGACATAAAAAACAGTATGGCATATCCTTGCTGTCCTGTAATATGGTCAAACAAATGTGATATACCGTACCTTATAGTACATCCGAGTTAACAGTGAGTTAGCACTACATTCTTAGTTGCTCTGCATAATTTAGTTATTTTGGATTTGCATTTACTAACTAGA]

[+] EMBL CF308101             [TTTTTTTGGTTTTTTTTTTTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAAATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGATCTAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAACCTGGGAAGAAGCAACGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAACTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAGGATTTTCTAGCTTCTTGCCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB647062             [                                                                                                                                                                                                                                                  AGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCAGTAACTGTAATTTTAGGAAAAAAGTAAAACCATTTTAGACTTTGTTCTTTGTGATATTTGATAATGTGAACTCATATACTGGCTCTTACTCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGCCGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATCTGGTAACATATACAATATCACATCTGTTATAACTGTTAATTCTGAAAGACATAAAAAACAGTATGGCATATCCTTGCTGTCCTGTAATATGGTCAAACAAATGTGATATACCGTACCTTATAGTACATCCGAGTTAACAGTGAGTTAGCACTACATTCTTAGTTGCTCTGCATAATTTAGTTATTTTGGATTTGCATTTACTAACTAGA]
[-] EMBL CA999503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGTGTGCAGGGGGTGCTTGGTGTCGTGCCGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATG                                                                                                                                                                                                                                    ]


>consensus_16479#0 TTTTTTTGGTTTTTTTTTTTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATA TCTTAAATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAA GATTACATCAATGAAGAAACACATAGGATCTAATAATTTAGCCAGGAAACACCTCTTGAA CTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAACCTGGGAAGAAGCAACGCCATC AGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTT GTTCACAATGGAGTTGAGGTATGCAACTGCTCCCTCGCGGAGCAGAGCACCAGTACCATC AGTTCCAGTGTTTGAAAGTGCATCATGAGGATTTTCTAGCTTCTTGCCAGTGATCAAACT GCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAAC ATCTGGATGGTTCTTCCAGTAACTGTAATTTTAGGAAAAAAGTAAAACCATTTTAGACTT TGTTCTTTGTGATATTTGATAATGTGAACTCATATACTGGCTCTTACTCGCAGGATCCAC AGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCG TGCCGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATG GTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTG ATCCATATGATGGAGTTGGGGAGCCACCATCTGGTAACATATACAATATCACATCTGTTA TAACTGTTAATTCTGAAAGACATAAAAAACAGTATGGCATATCCTTGCTGTCCTGTAATA TGGTCAAACAAATGTGATATACCGTACCTTATAGTACATCCGAGTTAACAGTGAGTTAGC ACTACATTCTTAGTTGCTCTGCATAATTTAGTTATTTTGGATTTGCATTTACTAACTAGA



consensusID : consensus_16479#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 1001
fasta sequence
                              [TTTTTTTTGTCAGTGTAAAACCAAGAAACAGACAGCGCTACAGCAGTCACAAATATCTCATAGTTATGGTGTGATCTTGTGACTACGCTATAGCTTGCTTTTATAGGTCACCAAAGCAAATTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT-CAGTTCCAGTGTTTGAAAGTGCAT-CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA-CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC-AGTAATCGCA-GGATCCACAG-AAATCATGCTTTGTCGG-AACTTCAGGGACATCAGGTGTGCT-GGGGGTG-CTTGG-TGT-CGTG-CCGT-AAGATG-GTGTTGGTGT-AGTG-CCGTAAG-ATGGTGTTGGTGTAGTG-CCATAAGATGGTGTTGGTGTAGAG-CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA-CCAGGACACCACTGATC-AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGAGGTGCTT]

[+] EMBL CF303082             [TTTTTTTTGTCAGTGTAAAACCAAGAAACAGACAGCGCTACAGCAGTCACAAATATCTCATAGTTATGGTGTGATCTTGTGACTACGCTATAGCTTGCTTTTATAGGTCACCAAAGCAAAATCTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AU093142             [                                                                                                                        TTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU174375             [                                                                                                                      ttTTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AU097390             [                                                                                                                                         GTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGA CAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGG                                                                                                                                                                                                                                         ]
[-] EMBL BI805851             [                                                                                                                                                 TTTATAAAAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAAGGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTNGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTG TGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATACAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTG AAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGAT CACAG AAATCATGC TTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT C NG  CGG AAGAa                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AK058752             [                                                                                                                                                        AAATCAAATATCTTAGATGGTGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB000613             [                                                                                                                                                                                                          ATGGA TTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAAC                                                                                                                                          ]
[-] EMBL AU031352             [                                                                                                                                                                                                                                                                                     TTGAACTAGTNTTGATAATCATTTGCCTTCTTGANGATCTCAGCCTGGGAAGAAGCA CGCCATCAGAGGTCATGGCCACGACNATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCATCCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGA                            ]
[-] EMBL BF430883             [                                                                                                                                                                                                                                                                                                                    TGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTAAGAGAAAGGAGCCCCA CCAGGACAGCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATG                         ]
[-] EMBL CA998345             [                                                                                                                                                                                                                                                                                                                                        GAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAG                                                                                                                ]
[-] EMBL CB000641             [                                                                                                                                                                                                                                                                                                                                                GCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTGGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGG                        ]
[-] EMBL CF325881             [                                                                                                                                                                                                                                                                                                                                                                                               TGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGA       ]
[-] EMBL C29027               [                                                                                                                                                                                                                                                                                                                                                                                                                 TGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF303191             [                                                                                                                                                                                                                                                                                                                                                                                                                           GGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGcc               ]
[-] EMBL CF308100             [                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAGGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGAGGTGCTT]
[-] EMBL CF307567             [                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCAT CAGTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTGTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCACCCAGGACACCACTGATCNAGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGAGGTGCTT]
[-] EMBL CF325791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTCCAGTGTTTGAAAGTGCAT CATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTA CCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCC AGTAATCGCA GGATCCACAG AAATCATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGA       ]
[-] EMBL OSS4587A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                atTGATAACATCCGGATGGTCCTCCCNATTAATCGCAGGGANCCACAGAAAATCATGCTTTGTCGGAAACTTCAGGGACATCAGNTGTGCT GGGGGTG CTTGG TGT CGTGCCCGT AAGATG NTGTTGGTGT AGTG CCGTAAG ATGGTGNTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATNTGANCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGNAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTNAGAGAAAGGAGCCCCA CCAGGACACCACTGATN AGNAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAA               ]
[-] EMBL C74809               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATGCTTTGTCGG AACTTCAGGGACATCAGGTGTGCT GGGGGTG CTTGG TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGG TCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTG                                                                                   ]
[-] EMBL OSS3644A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACTTCAGGGACATCAGNTGTGCT GGGGGTG CTTGN TGT CGTG CCGT AAGATG GTGTTGGTGT AGTG CCGTAAG ATGGTGTTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATNTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGG           ]
[-] EMBL OSS2803A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGCTGGGGGGTGCCTTGGTTGTCCGTGCCCGTAAAGATG GTGTTGGTGTAAGTGCCCGTAAG ATGGTGTTGGTGTAGTGCCCATAAGATGGTGTTGGTGTAGAGCCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGG           ]
[-] EMBL OS1321774            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cttgc CCGT AAGATGNTTGTTGTTGT AGTN CCGTAAGAATGTTGTTGTTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGANCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTG            ]
[-] EMBL CF324773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGGTGTAGTG CCATAAGATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGA       ]
[-] EMBL CF324755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGTAGTG CCATAACATGGTGTTGGTGTAGAG CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGA       ]
[-] EMBL OSS1652A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAC CCGTAA CTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTG                 ]
[-] EMBL CB000716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCA CCAGGACACCACTGATC AGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACcctc          ]


>consensus_16479#1 TTTTTTTTGTCAGTGTAAAACCAAGAAACAGACAGCGCTACAGCAGTCACAAATATCTCA TAGTTATGGTGTGATCTTGTGACTACGCTATAGCTTGCTTTTATAGGTCACCAAAGCAAA TTTTTGCAGTGCCATCTGTGATGGATTTATAAAAATCAAATATCTTAGATGGTGGTATTA CATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAA ACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATT TGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGAC GATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAG GTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAG TGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGT CTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCA GTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCT GGGGGTGCTTGGTGTCGTGCCGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGG TGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGG TTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGA AGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAG CCCCACCAGGACACCACTGATCAGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTG CAGAGAAGACAGAATGGATGACTGAACTGGTTGAGGTGCTT



consensusID : consensus_16479#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 650
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAATCAAATATCTTAGATGGNGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCAGTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGCCCGTAAGATGGTGTTGGTGTANTGCCCGTAAGANGGTGTTGGTGTAAGTGCCATAAGATGGTGTTGGTGTANAGCCCGTAAGCTGGTGTT]

[-] EMBL AU094699             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAATCAAATATCTTAGATGGNGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTNTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCAGTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGCCCGTAAGATGGTGTTGGTGTANTGCCCGTAAGANGGTGTTGGTGTAAGTGCCATAAGATGGTGTTGGTGTANAGCCCGTAAGCTGGTGTT]
[+] EMBL CF307568             [   TTTTTTTTTTTTTTTTTTTGGATTTATAAAAATCAAATATCTTAAATGGGGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGCGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGGTCTTCCAGTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAAGTGTGCTGGGGGTGCTT                                                                                                    ]
[-] EMBL AU031353             [        TTTTTTTTTTTTTTTTTTTTTT     T    TTTCTTAGANNGNGGTATTACATNGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGACGATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGA CAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCAGTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGNGTCGTG CCGTAAna                                                                                  ]


>consensus_16479#2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAATCAAATATCTTAGATGGNGGTATTA CATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAA ACACATAGGAGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATT TGCCTTCTTGAAGATCTCAGCCTGGGAAGAAGCAGCGCCATCAGAGGTCATGGCCACGAC GATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTTCACAATGGAGTTGAG GTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGTTCCAGTGTTTGAAAG TGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCAAGCAGTACCGAGTGT CTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATCTGGATGGTTCTTCCA GTAATCGCAGGATCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCT GGGGGTGCTTGGTGTCGTGCCCGTAAGATGGTGTTGGTGTANTGCCCGTAAGANGGTGTT GGTGTAAGTGCCATAAGATGGTGTTGGTGTANAGCCCGTAAGCTGGTGTT



consensusID : consensus_16479#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [CCNAAGGACCCCAATACTTNAGATGATAACATCTGGAATGGTCCTCNAAGTAATCGCAGGATCCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTTGTGCCTGGGGGTGCTTGTTGTCGTGCCGTAAGATGNTGTTGNTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCACCAGGACACCACTGATCAGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGCCCACGCGTNCNCN]

[-] EMBL C73786               [CCNAAGGACCCCAATACTTNAGATGATAACATCTGGAATGGTCCTCNAAGTAATCGCAGGATCCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTTGTGCCTGGGGGTGCTTGTTGTCGTGCCGTAAGATGNTGTTGNTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCACCAGGACACCACTGATCAGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGCCCACGCGTNCNCN]


>consensus_16479#3 CCNAAGGACCCCAATACTTNAGATGATAACATCTGGAATGGTCCTCNAAGTAATCGCAGG ATCCCACAGAAATCATGCTTTGTCGGAACTTCAGGGACATCAGGTTGTGCCTGGGGGTGC TTGTTGTCGTGCCGTAAGATGNTGTTGNTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGC CATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAAC CACCATCTGATCCATATGATGGAGTTGGGGAGCCACCATACTGAGTAGTAGAAGAGTAGG TCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCATGAGCTCAGAGAAAGGAGCCCCACCA GGACACCACTGATCAGAAGAACCTTGCTACTCATCTTGGCTCTCAGTATCTGCAGAGAAG ACAGAATGGCCCACGCGTNCNCN



consensusID : consensus_16479#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 267
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTGATTTATAAAAATCAAATATCTTAGATGGNNGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGGGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCCAGCCTGTGGAAANAAGCCAAGCCGNCATTCCAGGAAGGGTCCAATTGGG]

[-] EMBL AU097199             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTGATTTATAAAAATCAAATATCTTAGATGGNNGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCAAGATTACATCAATGAAGAAACACATAGGGGCAAATAATTTAGCCAGGAAACACCTCTTGAACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCCAGCCTGTGGAAANAAGCCAAGCCGNCATTCCAGGAAGGGTCCAATTGGG]


>consensus_16479#4 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTGATTTATAAAAATCAAATA TCTTAGATGGNNGGTATTACATTGCAAACCAAAAGAATACAATGGATTTATCAAACAGCA AGATTACATCAATGAAGAAACACATAGGGGCAAATAATTTAGCCAGGAAACACCTCTTGA ACTAGTAGTGATAATCATTTGCCTTCTTGAAGATCTCCAGCCTGTGGAAANAAGCCAAGC CGNCATTCCAGGAAGGGTCCAATTGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16479#0      ------------------------------------------------------------
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      TTTTTTTTGTCAGTGTAAAACCAAGAAACAGACAGCGCTACAGCAGTCACAAATATCTCA 60
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      --------------------------------------TTTTTTTGGTTTTT----TTTT 18
consensus_16479#4      --------------------------------------TTTTTTTTTTTTTT----TTTT 18
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      TAGTTATGGTGTGATCTTGTGACTACGCTATAGCTTGCTTTTATAGGTCACCAAAGCAAA 120
consensus_16479#3      ------------------------CCNAAGGACCCCAATACTTNAGATGATAACATCTGG 36
                                                                                   

consensus_16479#0      TTTTTGCAGTGCCATCTGTGATGGATTT-ATAAAAATCAAATATCTTAAA----TGGTGG 73
consensus_16479#4      TTTTTTTTTTTTTTTNTTTTTTTGATTT-ATAAAAATCAAATATCTTAGA----TGGNNG 73
consensus_16479#2      TTTTTTTTTTTTTTTTTTTTTTTTTTTT-ATAAAAATCAAATATCTTAGA----TGGNGG 55
consensus_16479#1      TTTTTGCAGTGCCATCTGTGATGGATTT-ATAAAAATCAAATATCTTAGA----TGGTGG 175
consensus_16479#3      AATGGTCCTCNAAGTAATCGCAGGATCCCACAGAAATCATGCTTTGTCGGAACTTCAGGG 96
                         *           *          *   * * ******    *  *       *    *

consensus_16479#0      -TATTACATTGCAAACCAAAA-GAATACAATGGATTTATCAAACAGCAAGATTACATCAA 131
consensus_16479#4      GTATTACATTGCAAACCAAAA-GAATACAATGGATTTATCAAACAGCAAGATTACATCAA 132
consensus_16479#2      -TATTACATTGCAAACCAAAA-GAATACAATGGATTTATCAAACAGCAAGATTACATCAA 113
consensus_16479#1      -TATTACATTGCAAACCAAAA-GAATACAATGGATTTATCAAACAGCAAGATTACATCAA 233
consensus_16479#3      ACATCAGGTTGTGCCTGGGGGTGCTTGTTGTCGTGCCGTAAGATGNTGTTGNTGTAGTGC 156
                         ** *  ***           *  *    * *     * * *         *  *    

consensus_16479#0      TGAAGAAACACATAGGATCTA----ATAATTTAGCCAGGAAACACCTCT-TGAACTAGTA 186
consensus_16479#4      TGAAGAAACACATAGGGGCAA----ATAATTTAGCCAGGAAACACCTCT-TGAACTAGTA 187
consensus_16479#2      TGAAGAAACACATAGGAGCAA----ATAATTTAGCCAGGAAACACCTCT-TGAACTAGTA 168
consensus_16479#1      TGAAGAAACACATAGGAGCAA----ATAATTTAGCCAGGAAACACCTCT-TGAACTAGTA 288
consensus_16479#3      CGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCTGGTG 216
                        * *  *     * **         ****  * *    *    *   *  * * ** ** 

consensus_16479#0      GTGATAATCATTTGCCTTCTTGAAGATC-TC-AACCTGGGAAGAAGCAACGCCATCAGAG 244
consensus_16479#4      GTGATAATCATTTGCCTTCTTGAAGATC-TCCAGCCTGTGGAAAN---AAGCCA--AGCC 241
consensus_16479#2      GTGATAATCATTTGCCTTCTTGAAGATC-TC-AGCCTGGGAAGAAGCAGCGCCATCAGAG 226
consensus_16479#1      GTGATAATCATTTGCCTTCTTGAAGATC-TC-AGCCTGGGAAGAAGCAGCGCCATCAGAG 346
consensus_16479#3      TTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGG--AGTTGGGGAGCC 274
                        **    *  * *   **  * *  * * **    *                    **  

consensus_16479#0      GTCATGGCCACGAC-GATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTT 303
consensus_16479#4      GNCATTCCAGGAAG-GGTCCAATTGGG--------------------------------- 267
consensus_16479#2      GTCATGGCCACGAC-GATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTT 285
consensus_16479#1      GTCATGGCCACGAC-GATGCAATCCTTAACCTGTTGGGTGGTAAAAGGGAATTTCTTGTT 405
consensus_16479#3      ACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTGCA 334
                         ***       *       * *                                     

consensus_16479#0      CACAATGGAGTTGAGGTATGCAACTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGT 363
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      CACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGT 345
consensus_16479#1      CACAATGGAGTTGAGGTATGCAGCTGCTCCCTCGCGGAGCAGAGCACCAGTACCATCAGT 465
consensus_16479#3      TGAGCTCAGAGAAAGGAGCCCCACCAGGACACCACTGATCAGAAGAACCTTGCTACTCAT 394
                                                                                   

consensus_16479#0      TCCAGTGTTTGAAAGTGCATCATGAGGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCA 423
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      TCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCA 405
consensus_16479#1      TCCAGTGTTTGAAAGTGCATCATGAAGATTTTCTAGCTTCTTGCCAGTGATCAAACTGCA 525
consensus_16479#3      CTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGCCCACGCGTNCNCN----------- 443
                                                                                   

consensus_16479#0      AGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATC 483
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      AGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATC 465
consensus_16479#1      AGCAGTACCGAGTGTCTTGCCAATGTCGCCAAGGGACCCAATAGCTGAGATGATAACATC 585
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      TGGATGGTTCTTCCAGTAACTGTAATTTTAGGAAAAAAGTAAAACCATTTTAGACTTTGT 543
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      TGGATGGTTCTTCCAGTAATCGCAGGATC--CACAGAAATCATGCTTTGTCGGAACTTCA 523
consensus_16479#1      TGGATGGTTCTTCCAGTAATCGCAGGATC--CACAGAAATCATGCTTTGTCGGAACTTCA 643
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      TCTTTGTGATATTTGATAATGTGAACTCATATACTGGCTCTTACTCGCAGGATCCACAGA 603
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      GGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGCCCGTAAGATGGTGTTGGTGTANT 583
consensus_16479#1      GGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTG-CCGTAAGATGGTGTTGGTGTAGT 702
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      AATCATGCTTTGTCGGAACTTCAGGGACATCAGGTGTGCTGGGGGTGCTTGGTGTCGTGC 663
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      GCCCGTAAGANGGTGTTGGTGTAAGTGCCATAAGATGGTGTTGGTGTANAGCCCGTAAGC 643
consensus_16479#1      G-CCGTAAGATGGTGTTGGTGTA-GTGCCATAAGATGGTGTTGGTGTAGAGCCGTAAGCT 760
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      CGTAAGATGGTGTTGGTGTAGTGCCGTAAGATGGTGTTGGTGTAGTGCCATAAGATGGTG 723
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      TGGTGTT----------------------------------------------------- 650
consensus_16479#1      GGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATCCATATGATGGAGTTGGGGAG 820
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      TTGGTGTAGAGCCGTAAGCTGGTGTTGGGGTTGGTGTTGGTTTGTAACCACCATCTGATC 783
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      CCACCATACTGAGTAGTAGAAGAGTAGGTCTTCTGTTCAGACAACTCTCCCAGGCTCCTG 880
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      CATATGATGGAGTTGGGGAGCCACCATCTGGTAACATATACAATATCACATCTGTTATAA 843
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      CATGAGCTCAGAGAAAGGAGCCCCACCAGGACACCACTGATCAGAAGAACCTTGCTACTC 940
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      CTGTTAATTCTGAAAGACATAAAAAACAGTATGGCATATCCTTGCTGTCCTGTAATATGG 903
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      ATCTTGGCTCTCAGTATCTGCAGAGAAGACAGAATGGATGACTGAACTGGTTGAGGTGCT 1000
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      TCAAACAAATGTGATATACCGTACCTTATAGTACATCCGAGTTAACAGTGAGTTAGCACT 963
consensus_16479#4      ------------------------------------------------------------
consensus_16479#2      ------------------------------------------------------------
consensus_16479#1      T----------------------------------------------------------- 1001
consensus_16479#3      ------------------------------------------------------------
                                                                                   

consensus_16479#0      ACATTCTTAGTTGCTCTGCATAATTTAGTTATTTTGGATTTGCATTTACTAACTAGA 1020
consensus_16479#4      ---------------------------------------------------------
consensus_16479#2      ---------------------------------------------------------
consensus_16479#1      ---------------------------------------------------------
consensus_16479#3      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)