cluster # 16561

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Oryza sativa
cluster # 16561 cluster # 16561 Sequences # 36 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_16561#0 length = 1120 sequences # 26
consensus_16561#1 length = 813 sequences # 7

consensus_16561#2 length = 423 sequences # 2
consensus_16561#3 length = 363 sequences # 1

consensusID : consensus_16561#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 1120
fasta sequence

                              [CAAACCCAATTTAGTCAAATTTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC-GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC-TTGGTCCCTTACATTTTCTTTA-CACTGCCTGG-TGGGCTG-TTCT-CTC-TGTTG-AGGGGAGAAATTGG-AAAATGGATTGCGAT-CATTGC-TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT-CCCTGATTGGTT-AGAGCTG-CCTGGTG-CTGTG-ATCCTTCTCA-TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC-CTTCCGAGGC--GACTTAGTTGGCATCTTCATATGCCTCATCA-T-TGGATGCTAC-CTGCTTCAAGAGCACATCAGGGC-GTCAGGTGGATTCAGGAAC-GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT-CCTCTTGCTCTTCATCTACCCTGTCTGGG-CCCTGGTGCTGAAC-TTTCTGT-AGGC-GC-CACCGCTT-CAGCGCTTCTCTAC-AC-CATCCAGCTCC-GATCG-CTGTTC-GTTCTTGTGTACATGTCTTG-TACGGT-GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT-G-TTTGGACCTCCTGCCTCCT-GATGCA-CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC-AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTAATACTTCTGAACAATAATGCTATGCAGTTGTGTGAATAAA]

[+] EMBL AK060000             [CAAACCCAATTTAGTCAAATTTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGA                                                                              ]
[+] EMBL CB629529             [                 AATTTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGATTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTC                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK066036             [                    TTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACTTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTACTACTTCTGAACAATAATGCTATGCAGTTGTGTGAAT   ]
[+] EMBL AU162308             [                                    CGAGAG TTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGANGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C98612               [                                     GAGA CTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C98693               [                                     nAGAGCTTGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGANAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCNAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAACTTGGAAGACCAACATGCTGACCG TCTC T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AF283006             [                                            TGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT GTTTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAaaaa                                       ]
[+] EMBL AU032349             [                                            TGCTTTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGANANAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTNGCGGCGCGGAAACTCGCCAACNACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCAACTTCCTCAAGTGGCTCGCCTTCTTCGCNGCCGTGTANCTNCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACGGCTCTCTTTGGTCCCTTANATTTTCTTTANAATTGCCTGG TGGGCTG TTCT CTCTTTTTN AGGGGAGAAATTGG AAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK060906             [                                                TTGATTTGATCCGCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTC                                                            ]
[+] EMBL CB664128             [                                                                            AAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTGCGAGCGATCTGCAGC GTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCAACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTAGGCATCTTCATATGCCTCATCA T TGGATGCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS2923A             [                                                                                                    GANGNGNCTAGCTAGGGTTGCNAGCNATCTNCAGCAGTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGACGGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS1249A             [                                                                                                                                                                                               GGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCAAT CATTGCTTGTCATCCTTCGTCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB652411             [                                                                                                                                                                                                                                GCCGACCTGCAGGAGCTGGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTTCGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGC GAT                                                                                                                                                                                                                                                                               ]
[-] EMBL CB664129             [                                                                                                                                                                                                                                                                                                                                        CTTTTTCGCCGCCGTGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTC TTGGTCCCTTACATTTTCTTTA CACTGCCTGG TGGGCTG TTCT CTC TGTTG AGGGGAGAAATTGG AAAATGGATTGCGAT CATTGC TGTCATCCTTCGTCTCTTCTTTCCTCGCCATTT CCCTGATTGGTT AGAGCTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTG                                                     ]
[+] EMBL C98613               [                                                                                                                                                                                                                                                                                                                                                                                                                                  TTA CACTGCCTGGTTGGGCCGNTTCTCCCC TGTTGNAGGGGAGAAATTGGAAAAATGGATTGCGATCCATGGC TGTCACCNTTCGTCTCTTCTTTCCTCGCCATTTCCCCTGATTGGTTNAGAGCTGCCCTGGTG CTGTG ATCCTTCTCA TTGCTNTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTTNCAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAaaaa                                       ]
[+] EMBL AU030660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tggaanCGAT CATTNC TGTNANCCTCNGTCTCNTCTTNCCTCNCCATTTCCCCTGATTGGTT AGAGCTGCCCTGGTGNCTGTGAATCCTTCTCANTTGCTGTTGCCCCGAACCTGTATNCGAGCAC CTTCCGAGGCCNAACTTAGTTNGCATNTCCATATGCCTCATCA T TGGATGCTAN CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCNTCAGGAAGNGCAACGGAGTGTCCAACAGCATTGGCATCCCTCTTGCTCTTCANCTACCCTGTCAGGGCCCCTGGTGCTGAACTTTTCTGTAAGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAaaaa                                       ]
[+] EMBL BM419972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTG CCTGGTG CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCACT TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGAACCTCCTGCCTCCT GATGCA CGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTC AGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTACTACTTCTGAACAATAAaaa                    ]
[+] EMBL BI800021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGGT  CTGTG ATCCTTCTCA TTGCTGTTGCCCCGAACCTGTTTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGAACCTCCTGCCTCCT GATGCA CGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTC AGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAaaaa                                       ]
[+] EMBL BI806314             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACCTGTTTGCGA CAC TTTCCGA GC  GACTTAGTTG  ATCTTCATATCCCTCATCA T TGGATGCTAC CNGCTTCAAGACCACATCA GGC  TCA GTGGATTCAG  AC GCCTTCAGGAA GGCAACGGAGTGTCCAACAGCATTGCCAT CCTCTTGCTCTTCATCTACCCTGTCTGGC CCCTGGTGCTGAAC TTTCTGT AGGC CC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCCAGATCG CTGTTC GTTCTTGNGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATC TTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCNGCCTCCT GATGCA CGTTTTCTT GCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTC TTCTGAGTGTACAAGCGTCAATAAATTCATCTC  TTCCCTTCT TAAATTTAAAGA CTTTAATCCAA TTCTCTAATGTGA TATCCCCACTACTACTTCTGAACAATAAT CTATCCA TTGTGTGAAAAAA]
[+] EMBL BM420657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGCGAGCAC CTTCCGAGGC  GACTTAGTTGGCATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGAACCTCCTGCCTCCT GATGCA CGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTC AGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTAAaaaaa                                  ]
[+] EMBL BI806315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCACACTTCCGAGGC  GACTTAGTTGGCATCTTCATANGCCTCATCA TGTGGATGCTACACTGCTTCAAGAGCACATCAGGGCAGTCAGGTGGATTCAGGAACAGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCNGT AGGCAGCACACCGCTT CAGCGCTTCTCTACAACACATCCAGCTCC GATC  CTGTTCAGTTCTTGTGTACATGTCTTG TACGGTNGATTTGGTATCTGGTGATCTGGTAGTATC TTTTGAGGAGATGGATAATGTATGG TTTGGACCTCCTGCCTCCT GATGCACCGTTTTC                                                                                                                                                                                        ]
[+] EMBL CA999631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCTTCATATGCCTCATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAAaaaaa                                                                                 ]
[+] EMBL AU070702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCA T TGGATGCTAC CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCTGGATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAAaaaaaaaa                                                                              ]
[+] EMBL AU182304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGCTTCAAGAGCACATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAaaaa                                       ]
[+] EMBL AU222886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCAGGGC GTCAGGTGGATTCAGGAAC GCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCAT CCTCTTGCTCTTCATCTACCCTGTCTGGG CCCTGGTGCTGAAC TTTCTGT AGGC GC CACCGCTT CAGCGCTTCTCTAC AC CATCCAGCTCC GATCG CTGTTC GTTCTTGTGTACATGTCTTG TACGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGCA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATCAAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTAAaaaa                                   ]
[+] EMBL AU032350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCAACAGCATTGGCAT CCTC TGCTCTTCATCTA CCTGTCTGGG CCCTGGTGCTGAAC  TTCTGT AGGC GC CACCGCTTACAGCGCTTCTCTAC AC NATCCAGCTCC GATCGACTGNTC GTTCTTGTGTACATGTCTTGTTNCGGT GATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTAT G TTTGGACCTCCTGCCTCCT GATGNA CGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATC AGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTACTACTTCTGAANNNTAATGCTATGCAGTTGTGTGAA    ]




>consensus_16561#0
CAAACCCAATTTAGTCAAATTTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCC
GCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTG
CGAGCGATCTGCAGCGTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGAC
GGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCT
GGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTT
CGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGA
TAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTAC
ACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCAT
TGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGG
TGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGGCGA
CTTAGTTGGCATCTTCATATGCCTCATCATTGGATGCTACCTGCTTCAAGAGCACATCAG
GGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGG
CATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCC
ACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATG
TCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAAT
GTATGTTTGGACCTCCTGCCTCCTGATGCACGTTTTCTTGGCATTTTCGTTTGTTGTAGC
TTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTG
TTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCACTA
ATACTTCTGAACAATAATGCTATGCAGTTGTGTGAATAAA

consensusID : consensus_16561#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 813
fasta sequence

                              [GTTGTCATTTGTGCATTTGAGTATTTGACTGAACCCCCTCTG-TCTCTTCTACTGCAGGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGG-CGACTTA-GTTGGCATCTTCATATG-CCTCATCAT-TGGATGCT--ACCTGCTTCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAAC-TTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAAAAAAAAAAAAAAAAAACACTGTCATAGCCGTTACGTAACGTAT]

[-] EMBL CB631656             [GTTGTCATTTGTGCATTTGAGTATTTGACTGAACCCCCTCTG TCTCTTCTACTGCAGGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGG CGACTTA GTTGGCATCTTCATATG CCTCATCAT TGGATGCT  ACCTGCTTCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAAC TTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCGGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCC                                              ]
[-] EMBL CB631655             [       TTTGTGCATTTGAGTATTTGACTGAACCCCCTCTGTTCTCTTCTACTGCAGGTACCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGG CGACTTA GTTGGCATCTTCATATG CCTCATCAT TGGATGCT  ACCTGCTTCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAAC TTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTGGGTTGCCTTCTGTAAATTTAAAGAGCTTTTAT                                                ]
[+] EMBL AA751166             [                                                                                                                                                                     GGGGAGAAATTGGAAAATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAA CTGTTTNCGAGCACCTTCCGAGGCCGACTTA GTTGGCATCTTCATA G  CTCATCA   GGA GCTACACCTGCTTCAAGAGCACAca                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI807586             [                                                                                                                                                                                                                                                                                                                  TCCGAGG CGACTTA  TTGGCATCTTCATATGCCCTCATCAT TGGATGCT  ACCTGCTTCAAGAGCACATCAGGGCTTCAGGTGGATTCAGGAACGCCTTCAGGAAGGCAAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTTCTGTAGGCGCCCCCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATC CTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAAAAAAAAA                                    ]
[+] EMBL BI811370             [                                                                                                                                                                                                                                                                                                                        G CGACTTATGTGGCCATCTTCATAGC CCTCATCATGTGGATGCT  ACCTGCTTCAAGAGCACATCAGGGCTTCAGGTGGATTCAGGAACCCCTTCAGGAAGGGCAACGGAGTGTCCCACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAAC TTTCTGTAGGCGCCCCCGCTTCAGCGCTTCT TACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCA                                                                                                                                ]
[+] EMBL BI808703             [                                                                                                                                                                                                                                                                                                                                                                                             GGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCT GGCCCTGGTGCTGAAC TTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATATTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAAaaa                                                             ]
[+] EMBL CF310752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAAAAAAAAAAAAAAAAAACACTGTCATAGCCGTTACGTAACGTAT]




>consensus_16561#1
GTTGTCATTTGTGCATTTGAGTATTTGACTGAACCCCCTCTGTCTCTTCTACTGCAGGTA
CCTCCTGATATTGGATAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCC
TTACATTTTCTTTACACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAA
ATGGATTGCGATCATTGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTG
GTTAGAGCTGCCTGGTGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAG
CACCTTCCGAGGCGACTTAGTTGGCATCTTCATATGCCTCATCATTGGATGCTACCTGCT
TCAAGAGCACATCAGGGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGT
GTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAA
CTTTCTGTAGGCGCCACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTC
GTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTT
GAGGAGATGGATAATGTATGTTTGAACCTCCTGCCTCCTGATGCACGTTTTCTTAGCATA
TTCGTTTGTTGTAGCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCA
ATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAAAAAAAAAAAA
AAAAAACACTGTCATAGCCGTTACGTAACGTAT

consensusID : consensus_16561#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 423
fasta sequence

                              [ACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCCACCGCTTCANCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGGACCTCCTGCCTCCTGMTGCACGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAAAAAAAAAAAAAAAAAAACTCGAGAG]

[+] EMBL BP432952             [ACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCCACCGCTTCANCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGGACCTCCTGCCTCCTGMTGCACGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAAAAAAAAAAAAAAAAAAACTCGAGAG]
[+] EMBL CB839815             [                                                                                                                                                                                                                                                                CTTGGCATTTTCGTTTGTTGTAGCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCA                          ]




>consensus_16561#2
ACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGGCATCCTCTTGCTCTTCATCT
ACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCCACCGCTTCANCGCTTCTCTA
CACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATGTCTTGTACGGTGATTTGGTA
TCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAATGTATGTTTGGACCTCCTGCC
TCCTGMTGCACGTTTTCTTGGCATTTTCGTTTGTTGTAGCTTTGCTATCAGCCCGTGTTT
CGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTCTGTTGCCTTCTGTAAATTTAAA
GAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAAAAAAAAAAAAAAAAAAACTCGA
GAG

consensusID : consensus_16561#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 363
fasta sequence

                              [TATGCATCTCATAGCCTCATCATGGGATGCTACCTGCTTCAAGACACATCAGGCTTCAGGTGGATTCAGGAACCTTCAGGAAGGGCAACGGAGTGTCCAACAGCANGGGCATCCTCTTGCTCTTCATTACCCGTCTGGCCCTGGTGCTGAACTTTCTGTAGGCNCCACCGCTTCAGCGCTTCTTACACCATCCAGCTCCGATCCTGTTCGTTCTGGGACATGTCTTGTACCGGTGATTTGGTATCTGGTGATCTGGTAGTATCTTTTGAGGAGATGGATAATGTATGTTGGAACCTCCGCCTCCGTGAGTGCACGTTTTCTTAGCATATTCTTTTTTACTTCTTCACCCCTTTTCCCCTTCTG]

[+] EMBL BI811433             [TATGCATCTCATAGCCTCATCATGGGATGCTACCTGCTTCAAGACACATCAGGCTTCAGGTGGATTCAGGAACCTTCAGGAAGGGCAACGGAGTGTCCAACAGCANGGGCATCCTCTTGCTCTTCATTACCCGTCTGGCCCTGGTGCTGAACTTTCTGTAGGCNCCACCGCTTCAGCGCTTCTTACACCATCCAGCTCCGATCCTGTTCGTTCTGGGACATGTCTTGTACCGGTGATTTGGTATCTGGTGATCTGGTAGTATCTTTTGAGGAGATGGATAATGTATGTTGGAACCTCCGCCTCCGTGAGTGCACGTTTTCTTAGCATATTCTTTTTTACTTCTTCACCCCTTTTCCCCTTCTG]




>consensus_16561#3
TATGCATCTCATAGCCTCATCATGGGATGCTACCTGCTTCAAGACACATCAGGCTTCAGG
TGGATTCAGGAACCTTCAGGAAGGGCAACGGAGTGTCCAACAGCANGGGCATCCTCTTGC
TCTTCATTACCCGTCTGGCCCTGGTGCTGAACTTTCTGTAGGCNCCACCGCTTCAGCGCT
TCTTACACCATCCAGCTCCGATCCTGTTCGTTCTGGGACATGTCTTGTACCGGTGATTTG
GTATCTGGTGATCTGGTAGTATCTTTTGAGGAGATGGATAATGTATGTTGGAACCTCCGC
CTCCGTGAGTGCACGTTTTCTTAGCATATTCTTTTTTACTTCTTCACCCCTTTTCCCCTT
CTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16561#1      ------------------------------------------------------------
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      CAAACCCAATTTAGTCAAATTTTACCCAATCGCCAGCGAGAGCTTGCTTTGATTTGATCC 60
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      ------------------------------------------------------------
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      GCGCGCGGAGAAGACGAAGCGAGAGAGAGAGGGAGAGGTGGAGGAGGCTAGCTAGGGTTG 120
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      ------------------------------------------------------------
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      CGAGCGATCTGCAGCGTGGGAGATGGGGAAGGGGTTCATGTCGTACCTGGCGATGAAGAC 180
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      ------------------------------------------------------------
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      GGACGCGGCGGGAGGGGAGGCGGCGCAGGCGGCGCTGATCGACGCCGACCTGCAGGAGCT 240
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      ---------------------------------------------GTTGTCATTTGTGCA 15
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      GGGCGTGGCGGCGCGGAAGCTCGCCAACCACGCGCTCGTCCTCGGCGGCGGCCTCGGGTT 300
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      TTTGAGTATTTGACTGAACCCCCTCTGTCTCTTCTACTGCAGGTACCTCCTGATATTGGA 75
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      CGGCACCACCTTCCTCAAGTGGCTCGCCTTCTTCGCCGCCGTGTACCTCCTGATATTGGA 360
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      TAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTAC 135
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      TAGGACAAACTGGAAGACCAACATGCTGACCGCTCTCTTGGTCCCTTACATTTTCTTTAC 420
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      ACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCAT 195
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      ACTGCCTGGTGGGCTGTTCTCTCTGTTGAGGGGAGAAATTGGAAAATGGATTGCGATCAT 480
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      TGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGG 255
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      TGCTGTCATCCTTCGTCTCTTCTTTCCTCGCCATTTCCCTGATTGGTTAGAGCTGCCTGG 540
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      TGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGGCGA 315
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      TGCTGTGATCCTTCTCATTGCTGTTGCCCCGAACCTGTTTGCGAGCACCTTCCGAGGCGA 600
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      CTTAGTTGGCATCTTCATATGCCTCATCATTGGATGCTACCTGCTTCAAGAGCACATCAG 375
consensus_16561#3      -----TATGCATCT-CATA-GCCTCATCATGGGATGCTACCTGCTTCAAGA-CACATCAG 52
consensus_16561#0      CTTAGTTGGCATCTTCATATGCCTCATCATTGGATGCTACCTGCTTCAAGAGCACATCAG 660
consensus_16561#2      ------------------------------------------------------------
                                                                                   

consensus_16561#1      GGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGG 435
consensus_16561#3      G-CTTCAGGTGGATTCAGGAAC--CTTCAGGAAGGGCAACGGAGTGTCCAACAGCANGGG 109
consensus_16561#0      GGCGTCAGGTGGATTCAGGAACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGG 720
consensus_16561#2      --------------------ACGCCTTCAGGAAGGGCAACGGAGTGTCCAACAGCATTGG 40
                                           **  ********************************  **

consensus_16561#1      CATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCC 495
consensus_16561#3      CATCCTCTTGCTCTTCAT-TACCC-GTCTGG-CCCTGGTGCTGAACTTTCTGTAGGCNCC 166
consensus_16561#0      CATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCC 780
consensus_16561#2      CATCCTCTTGCTCTTCATCTACCCTGTCTGGGCCCTGGTGCTGAACTTTCTGTAGGCGCC 100
                       ****************** ***** ****** ************************* **

consensus_16561#1      ACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATG 555
consensus_16561#3      ACCGCTTCAGCGCTTCT-TACACCATCCAGCTCCGATC-CTGTTCGTTCTGGG--ACATG 222
consensus_16561#0      ACCGCTTCAGCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATG 840
consensus_16561#2      ACCGCTTCANCGCTTCTCTACACCATCCAGCTCCGATCGCTGTTCGTTCTTGTGTACATG 160
                       ********* ******* ******************** *********** *   *****

consensus_16561#1      TCTTGTAC-GGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAA 614
consensus_16561#3      TCTTGTACCGGTGATTTGGTATCTGGTGATCTGGTAGTATC-TTTTGAGGAGATGGATAA 281
consensus_16561#0      TCTTGTAC-GGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAA 899
consensus_16561#2      TCTTGTAC-GGTGATTTGGTATCTGGTGATCTGGTAGTATCGTTTTGAGGAGATGGATAA 219
                       ******** ******************************** ******************

consensus_16561#1      TGTATGTTTGAACCTCCTGCCTCCTGA-TGCACGTTTTCTTAGCATATTCGTTTGTTGTA 673
consensus_16561#3      TGTATGTTGGAACCTCCGCCTCCGTGAGTGCACGTTTTCTTAGCATATTCTTTT-TTACT 340
consensus_16561#0      TGTATGTTTGGACCTCCTGCCTCCTGA-TGCACGTTTTCTTGGCATTTTCGTTTGTTGTA 958
consensus_16561#2      TGTATGTTTGGACCTCCTGCCTCCTGM-TGCACGTTTTCTTGGCATTTTCGTTTGTTGTA 278
                       ******** * ******  *  * **  ************* **** *** *** **   

consensus_16561#1      GCTTTGCTGTCAGCCCGTGTTTCGCCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTC 733
consensus_16561#3      TCTTCAC------CCC---TTTTCCCCTTCTG---------------------------- 363
consensus_16561#0      GCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTC 1018
consensus_16561#2      GCTTTGCTATCAGCCCGTGTTTCGTCGTTCTGAGTGTACAAGCGTCAATAAATTCATCTC 338
                        ***  *      ***   ***   * *****                            

consensus_16561#1      TGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAAAAAAAAAAAAAAAAAACACTGTC 793
consensus_16561#3      ------------------------------------------------------------
consensus_16561#0      TGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAC 1078
consensus_16561#2      TGTTGCCTTCTGTAAATTTAAAGAGCTTTTATCCAAGTTCTCTTATGTGATTATCCCCAA 398
                                                                                   

consensus_16561#1      ATAGCCGTTACGTAACGTAT---------------------- 813
consensus_16561#3      ------------------------------------------
consensus_16561#0      TAATACTTCTGAACAATAATGCTATGCAGTTGTGTGAATAAA 1120
consensus_16561#2      AAAAAA----AAAAAAAAAAACTCGAGAG------------- 423