These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16660#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1387 fasta sequence [GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC-ACCTCT-GACCCAAAGAAAACAC-TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT-CGAAGCAAATCT-GC-TGGAAGAGGGCTC-TTTCGATGCTG-CGG-TCAATGGTT-GTGATTGTGTTTTCCAT-ACGGCTTC-TCCC-TTTTACC-ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT-GGCT-GGATAAACGTTAA-GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT-GGAA-GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG-AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC-GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF330329 [GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGATTATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGTTGTGTGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAAAGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTCGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTA ] [+] EMBL AK068824 [ TCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCAtgttt ] [+] EMBL OSS1972A [ CCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGTTACACGGTNCGCGCCACCATCCGGGACAACTTNT NANCCAAAGAAAACAC TACAACTTCGTTCCCTNGATTGAGCCAACGAAAGANTTCATTTNTT CGAAGCAAATCT TCTTGGAAG ] [+] EMBL AU067974 [ ACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCG ] [+] EMBL AU181856 [ TCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGG ] [+] EMBL CB645627 [ TCTCGCCCTTTAAGGGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTG ] [+] EMBL AU069566 [ tntnTCGCNCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCANACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTNAGGCGGCG CCGGAACCGGNAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTAAGGCTGCTCCTCGCCCGNGGCTACACGGTCCGCGCCACCATCCGGNAC ACCTCT AACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGANTCCATTTGTT CGAAGCAAATCT GC TTGAAGAGGG TC TTTCGATGCTN CGG TCAATGGTT TAATTGT TTTTCCAT ACGGCTTC T CC TTTTACC ACAATGTTAAAGATCCTAAGGttag ] [+] EMBL CF280693 [ CGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTTGGTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGANAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACC ] [+] EMBL OSC103831 [ GCGCTCTCTACGGAGCCAAGGCGAGGAGGCGGCGGCGNCGGNGNCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTNAGGCGGCGNCCGGNACCNGGAAGCTGGTGTNCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGACCGCGGNTACACGGTTCGAGATACCATCCAGGAC AACTCT NACCCAAAGAAAACAC TACACCTGCGT TCCTAGATGGA ] [+] EMBL AU069349 [ TCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC A CTCT GACCCAAAGAAAACAC TACA CTGCGTG CCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAA AAGGCTCTTTTCGATGCT ] [+] EMBL AU163616 [ CTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCTGGACCCAAAGAAAACACTTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCCGAAGCAAATCTNGC TGGAAGAGGGCTC TTTCGATGCTGCCGGTTCAATGGTT GTGATTGTGTTTTCCATAACGGCTTCTTCCCTTTTTACCAACAATGTTta ] [+] EMBL AU162706 [ CTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG CGG TCAATGGTT GTGATTGTGTTTTCCAT ACGGCTTC TCCC TTTTACC ACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGANATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTA TTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAACAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAAT ] [+] EMBL AU093494 [ GGA CCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGAC ACCTCT GACCCAAAGAAAACAC TACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTT CGAAGCAAATCT GC TGGAAGAGGGCTC TTTCGATGCTG ] [+] EMBL OS1020A [ AATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTNAAGCTAATCAATGGATCATCCTCGACATATCCTAATTNCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGNACATATCCTTGCATATGGAGTTCCTTCAGCAAATGGGAG GATATTGCATGGTTGGAAGAGTTGCGGACTACTCAGAGCTCGTCC AATCATTCGTG GGTGTATCCC ATATTCCTNTGCCAG CAAGTGTGC GGTGCCAGGCnttnggc ] [+] EMBL C28940 [ AGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGGCTGGGATAAACGGTAAGGGATGTTTCCCTGGGACATATCCTTGCATATGAAGTTCCCTCAGCAAATGGGAAGGTTTTTCCATGGgttta ] [+] EMBL OSC2051A [ CATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAAGGGATGTTGCCCTGGNACATATCCTTGCATATGA ] [-] EMBL CF326219 [ ATCCTCGACATATCCTAATTTCAGCTTT GGCT GGATAAACGTTAA GGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAAAGTTGCGCCCTACTCAAAGCTCGTCCAAATCATTTGTGAGATGTATCCCAATATTCCTTTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATTTTCCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCCCCCGAGCATCAAGGAGACCCTCGAGAGCTTGAAAAAAAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACCCATGAACTTGCTTGTCATAGCTAGAAATATTAC GGTAACTTTGCATGAACTACTACAAATGTGGTCTGTATTCTGTACTACGATTTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU181468 [ CTTGCATATGAAGTTCCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCNAAAAAAAAAAAAAAAA ] [+] EMBL AU182030 [ CCTTCAGCAAAT GGAA GATATTGCATGGTTGAAAGAGTTGCGCNCTACTCAGAGCTNGTCCAAATCATTNGTGAGATGTATCCCAATATTCCTNTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAAT TTCCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTGAAANANAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTNTGTACTACGATNTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTNTGCCCAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU181857 [ AGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAANATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCNCACGAGCATCAAGGAGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAAACAACAG AGCTCCATACNCATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATNTGAAATAAAGTGGAGGCAAATTGCAGTGTTGATTATTCTGCCNAAAAAAAAAAAAAAAAAAAA ] [+] EMBL CF328266 [ CAACAGAAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGC GGTAACTTTGCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_16660#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1359 fasta sequence [TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCCAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA-CCCAGCAATGGTCATTGGTCCCCTGCTGC-AGCCTTCAC-TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT-CAATGGATCATCCTC-GACATATCCTAAT-TTCAGCTTTGGCTGGATAAACGT-TAAGGATGTTG-CCCTGGCACATAT-CCTTGCATATG-AAGTTCCT-TCAGCA-AA--TGGAAGATATTGCATGGTTGA-AAGAGTTGCG-CA-CTA-CTCAGAGCTCGTCCAAAT-CA-TTCGTGAG-ATGTATCCC-AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG-CCAATCTACCAGGTATC-AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT-GAAAGAGAAAGGATTTGTTACTTTTGAT-TCAAGCAACCTGTAAAACAACAGAGCT-CCATACACATGAACTTGCTTGT-CA----TAGCTAGTACTCTAGCGGTAACTTTGC-ATGAACTACTAC-AGATGTGGTCTGTATTCTGTACTACGATCTGAAA--TAAAGTGGAGGCAAATTGCA--GTGTTGATTAAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGTATC] [+] EMBL AK059305 [TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCCGGAGCCAAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCCAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGC ] [-] EMBL CB645628 [ tGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGTCCCTAGCAGAGGAGGATGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGCTACGGTGAC CCCAGCAATGGTCATTGGTCCCCTGATGC ATCCTTCAA TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCGTAAT TTCACCTTTGGCTGGATAACCGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCACGTTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGCGAG ACGTATCCC AATATTCCTGTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATACAAAGCTTGGCCCTGGAAGAGATTCCCCTGCACACGAGCATCAAGGAGCCCATTGAGAGCTT GAAAGAGAACGGATTTGTTACTTTTGAT TCAAGCACCCTCTAAATCAACAGAGCT CCATACACATGAACTTG ] [-] EMBL CF280694 [ CAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTCTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGGTGATTTAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGTATC] [-] EMBL CF330328 [ GAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAA CCCAGCAATGGTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATACTAGTGCTGAAGCAATTCTGAAGTTAAT CAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATTTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGTACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAA ] [+] EMBL AU067975 [ AAAGATAATGGATTTGNAATAGTTACGGTGAACCCCAGCAATGNTCATTGGTCCCCTGCTGC AGCCTTCAC TGAATNCTAGTGCTGAAGCAATTCTGAAGCTAATCCAATGGATCATCCTC GACATATCCTAAT TTCAGCTTTGGCTGGATAANCGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAA ] [+] EMBL AU165252 [ TCATTGGTCCCCTGCTGCAAGCCTTCACTTGAATACTAGTGNTGAAGCAATTCTGAAGCTAAT CAATGGATCATCCTCGGACATATCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAA ] [+] EMBL AU056682 [ CTAAAGCTAAT CAATGGATCATCCTC GACATANCCTAAT TTCAGCTTTGGCTGGATAAACGT TAAGGATGTTG CCCTGGCACATAN CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGNAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAA ] [+] EMBL BQ909262 [ CCTC GACATATCCTAATNTTCAGCTTTGGCTGGATAAACGTNTAAGGATGTTG CCCTGGCACATATCCCTTGCATATG AAGTTCCTNTCAGCACAACGTGGAAGATATTGCATGGTTGATAAGAGTTGTG CACCTACCTCAGAGCTCGTCCAAAT CAGTTCGTGAG ATGTATCCC AACATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGTCCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTTCGAAAGAGNAAGGATTTGTTACTTTTGATGTCAAGCAACCTGTAAAACNACAGAGCTGCCATACACATGAACTTGCTTGTGCATAGCTAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGCTGTGGTCTGTACTCTGTACTACGATCTGAAACNCCNAGTGGAGGCCAATTGCAGTGTGTTGATTAAAAAAAAAA ] [+] EMBL C98735 [ GGATGTTGCCCCTGGCACATAT CCTTGCATATGAAAGTTCCT TCAGCA AA TGGAAGATATTNCATGGTTGA AAGAGTTGCGCCA CTA CTCAGAGCTCGTCCAAATCCA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCNGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCN GTGTTGATTAAAAA ] [+] EMBL AU093493 [ TG CCCTGGCNCATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGNGCTCGTCCAAAT CA TTCGTGNG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGNGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGAAAAAAAAAAAAAAAAAAAAAAAAAaaaaaaaa ] [+] EMBL AU197714 [ CATAT CCTTGCATATG AAGTTCCT TCAGCA AA TGGAAGATATTGCATGGTTGA AAGAGTTGCG CA CTA CTCAGAGCTCGTCCAAAT CA TTCGTGAG ATGTATCCC AATATTCCTCTGCCAGACAAGTGTGCAGATGNCAAGCCATCAGTG CCNATCTTCCAGGTATC AAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGCAATGAACTACTACAANATGTGGTCTGTATTNTGTANTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAA ] [+] EMBL AU166661 [ CA TTNGTGAGAATGTATCCCAAATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTG CCAATCTACCAGGTATCAAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGGAGACCATCGAGAGCTT GAAAGAGAAAGGATTTGTTACTTTTGAT TCAAGCAACCTGTAAAACAACAGAGCT CCATACACATGAACTTGCTTGT CA TAGCTAGTACTCTAGCGGTAACTTTGC ATGAACTACTAC AGATGTGGTCTGTATTCTGTACTACGATCTGAAA TAAAGTGGAGGCAAATTGCA GTGTTGATTAAAAAAAAAA ] consensusID : consensus_16660#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 809 fasta sequence [CCGGAGCCAAGGCGAGGAGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG] [+] EMBL CB621471 [CCGGAGCCAAGGCGAGGAGGCGGCGGTGCGAGACGAGATCGTCGAGTCCGGCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCGCGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGCTGCGGTCAATGGTTGTGATTGTGTTTTCCATACGGCTTCTCCCTTTTACCACAATGTTAAAGATCCTAAGGCTGAGTTACTTGACCCTGCAGTCAAAGGAACCCTTAATGTTCTAGGCTCCTGCAAGAAAGCTTCCATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTGTTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAGTTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGGAGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG] consensusID : consensus_16660#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence [GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCCAAGGCGANGAAAGCGGCGGTGCGAGACNAGATCNTCGAGTCCGGCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCNCGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCCGGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAAAGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCTTTCNATGCTNCNGTCNATGGTTGTGATTGTGTTTTCCCTACNGCTTCTCCTTTTACCACNATGTTTNANATCCTTACGCTGAATTNCTTNACCCTGCCCNTCNNAN] [+] EMBL AA753021 [GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCCAAGGCGANGAAAGCGGCGGTGCGAGACNAGATCNTCGAGTCCGGCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGTCTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCNCGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCCGGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAAAGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCTTTCNATGCTNCNGTCNATGGTTGTGATTGTGTTTTCCCTACNGCTTCTCCTTTTACCACNATGTTTNANATCCTTACGCTGAATTNCTTNACCCTGCCCNTCNNAN] consensusID : consensus_16660#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence [GTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGTCAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTACAGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACATATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGCTACTCTTATTGTTTGGCAACTCACACAAGCACTGTGATATATTTCATATTGAAAAGGAATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTACATATGG] [+] EMBL CA997959 [GTGAACCCAGCAATGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGTCAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTACAGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACATATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGCTACTCTTATTGTTTGGCAACTCACACAAGCACTGTGATATATTTCATATTGAAAAGGAATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTACATATGG] consensusID : consensus_16660#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGNTGCGGTCAATGGTTGTANATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAGATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAGGNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN] [+] EMBL AU062682 [TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCCGGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAAAGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCTTTCGATGNTGCGGTCAATGGTTGTANATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAGATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAGGNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN] consensusID : consensus_16660#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 166 fasta sequence [GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGTACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTGTTGATTATTCTGCCAAAAA] [+] EMBL AU165107 [GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGTACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATCTGAAATAAAGTGGAGGCAAATTGCAGTGTGTTGATTATTCTGCCAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16660#2 ----------------------------------------------------CCGGAGCC 8 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 -------GCAGGATTCGGCACTNGCTCCACNCCATCTCTCTCGCGCTCTCTCCGGGAGCC 53 consensus_16660#1 --TATTACTACTCCTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCC-GGAGCC 57 consensus_16660#0 GAGTAGAAAACTTTTCTTCACCCACTCCACGCCATCTCTCTCGCGCTCTCTCC-GGAGCC 59 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 AAGGCGAGGAG------------------GCGGCGGTGCGAGACGAGATCGTCGAGTCCG 50 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 AAGGCGANGAAA-----------------GCGGCGGTGCGAGACNAGATCNTCGAGTCCG 96 consensus_16660#1 AAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCG 117 consensus_16660#0 AAGGCGAGGAGGCGGCGGCGGCGGCGGCGGCGGCGGTGCGAGACGAGATCGTCGAGTCCG 119 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 GCGCCCCAACCCCGTCCTTCGGTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 110 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 GCGCCCCACCCCCGTCCTTCGGTTCACACNAAAAGGAAGGGAGGAANATTAGCTCCGAGT 156 consensus_16660#1 GCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 177 consensus_16660#0 GCACCCCACCCCCGTCCTTCGCTTCACACGAAAAGGAAGGGAGGAAGATGAGCTCCGAGT 179 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 -----------------------------GTGAACCCAGCAATGGTCATTGGTCCCCTGC 31 consensus_16660#2 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 170 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 CTGAGGCGGCGCCCGGGACCGGGAAACTGGTGTNCGTCNCCGGCGCGTCNGGGTNCATCN 216 consensus_16660#1 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 237 consensus_16660#0 CTGAGGCGGCGCCCGGGACCGGGAAGCTGGTGTGCGTCACCGGCGCGTCGGGGTACATCG 239 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 TGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGGTATGGGGT 91 consensus_16660#2 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCGTCC--- 227 consensus_16660#5 ---------------------TCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 36 consensus_16660#3 CGTCTTGGCTCGTCAGGNTGCTCCTCCCCCGCGGCTACACGGTCCGCGCCNCCGTCC--- 273 consensus_16660#1 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 294 consensus_16660#0 CGTCGTGGCTCGTCAGGCTGCTCCTCGCCCGCGGCTACACGGTCCGCGCCACCATCC--- 296 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 CAACACCTTAACTAACACATTTCCTTGAATTGAGCTACAGCGTACGTGCCTTCATCCTAC 151 consensus_16660#2 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 286 consensus_16660#5 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 95 consensus_16660#3 GGGACACCTCTGACCCAAAGAANACACTACNCCTGCGTGCCCTGGATGGAGCCNACNAA- 332 consensus_16660#1 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 353 consensus_16660#0 GGGACACCTCTGACCCAAAGAAAACACTACACCTGCGTGCCCTGGATGGAGCCAACGAA- 355 consensus_16660#6 ---GCTCCACCAACTAAAGAACGGCCATGCACATGAACTTGCATGTCATAGCTAGCTAGT 57 consensus_16660#4 AGTAGATTTTTCTTGTGATGCCTACAACAATTTTGCATTTGCCCTTTAGGAGAAACACA- 210 * * ** * * consensus_16660#2 AGACTCCATTTATTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 343 consensus_16660#5 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGNTGCGGTC 152 consensus_16660#3 AGACTCCCTTTATTCTNTTNNTATCTNCTGGAANANGGCTCT---TTCNATGCTNCNGTC 389 consensus_16660#1 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 410 consensus_16660#0 AGACTCCATTTGTTCGAAGCAAATCTGCTGGAAGAGGGCTCT---TTCGATGCTGCGGTC 412 consensus_16660#6 ACTCTAGCGGTAACTTTGCATGAACTACTACAGCTGTGGTCTGTACTCTGTACTACGATC 117 consensus_16660#4 -TATTAGGACAATTATCTAGGACTCGGATAGAAGATAGACATGCTCATGGTATTTCAAGC 269 * * * * * * * * * * consensus_16660#2 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 398 consensus_16660#5 AATGGTTGTA-NATTGTNTTTTCCATACGGGCTTTNNCCNNTTTACCACAATGTTTAAAG 211 consensus_16660#3 NATGGTTGT--GATTGTGTTTTCCCTACNG---CTTCTCCTTTTACCACNATGTTTNANA 444 consensus_16660#1 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 465 consensus_16660#0 AATGGTTGT--GATTGTGTTTTCCATACGG--CTTCTCCCTTTTACCACAATGTT-AAAG 467 consensus_16660#6 TGAAATAAAGTGGAGGCAAATTGCAGTGTG---TTGATTATTCTGCCAAAAA-------- 166 consensus_16660#4 TACTCTTATTGTTTGGCAACTCACACAAGCA--CTGTGATATATTTCATATTGAAAAGGA 327 * * * * * * * ** consensus_16660#2 ATCCT-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 452 consensus_16660#5 ATCNTTAAGGCTTGAGTTACTTTGACCCGNGCAGTCAAAGGGNCNNGGTAANTGTTCTAG 271 consensus_16660#3 TCCTT--ACGCT-GAATTNCTT-NACCCTGCCCNTCNNAN-------------------- 480 consensus_16660#1 ATCCC-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 519 consensus_16660#0 ATCCT-AAGGCT-GAGTTACTT-GACCC-TGCAGTCAAAGGAACCC--TTAATGTTCTAG 521 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ATTCTCCTGTCAATTGCTCATCTAACTAATTGACTTATGAATCCTGAAGCCACAAGCTAC 387 consensus_16660#2 GCTCCT--GCAAGAAAGCTTC-CATTCGAAGAGTTATCGTGACATCATCCATGGCTGCTG 509 consensus_16660#5 GNTTNGTGGCAAGNAAGCTTTTCAATTANGAAGNN------------------------- 306 consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 GCTCCT--GCAAGAAAGCTTC-CATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTG 576 consensus_16660#0 GCTCCT--GCAAGAAAGCTTC-CATTAGAAGAGTTATCGTGACATCATCCATGGCTGCTG 578 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ATATGG------------------------------------------------------ 393 consensus_16660#2 TTGCCTACAACGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 569 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 TTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 636 consensus_16660#0 TTGCCTACAATGGGAAACCAAGAACTCCTGATGTAGTTGTTGATGAGACATGGTTTTCAG 638 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 629 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 696 consensus_16660#0 TTCCAGAGATTTGTGAAAAGCATCAGCAATGGTATGTTCTGTCCAAGACCCTAGCAGAGG 698 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 689 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 756 consensus_16660#0 AGGCTGCTTGGAAGTTTTCAAAAGATAATGGATTTGAAATAGTTACGGTGAACCCAGCAA 758 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 749 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 816 consensus_16660#0 TGGTCATTGGTCCCCTGCTGCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGC 818 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 809 consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 876 consensus_16660#0 TAATCAATGGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG 878 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 ATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCA 936 consensus_16660#0 ATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGGAAGATATTGCA 938 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 TGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCA 996 consensus_16660#0 TGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCA 998 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 ATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTAT 1056 consensus_16660#0 ATATTCCTCTGCCAGACAAGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTAT 1058 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 CAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGG 1116 consensus_16660#0 CAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAGG 1118 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 AGACCATCGAGAGCTTGAAAGAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAA 1176 consensus_16660#0 AGACCATCGAGAGCTTGAAANAGAAAGGATTTGTTACTTTTGATTCAAGCAACCTGTAAA 1178 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 ACAACAGAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGTAACTTT 1236 consensus_16660#0 ACAACAGAGCTCCATACACATGAACTTGCTTGTCATAGCTAGTACTCTAGCGGTAACTTT 1238 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 GCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGC 1296 consensus_16660#0 GCATGAACTACTACAGATGTGGTCTGTATTCTGTACTACGATCTGAAATAAAGTGGAGGC 1298 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ------------------------------------------------------------ consensus_16660#5 ------------------------------------------------------------ consensus_16660#3 ------------------------------------------------------------ consensus_16660#1 AAATTGCAGTGTTGATTAAAAAAAAAAAAAAAAAAAAAATATCATGCCGTTACGTAGCGT 1356 consensus_16660#0 AAATTGCAGTGTTGATTATTCTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1358 consensus_16660#6 ------------------------------------------------------------ consensus_16660#4 ------------------------------------------------------------ consensus_16660#2 ----------------------------- consensus_16660#5 ----------------------------- consensus_16660#3 ----------------------------- consensus_16660#1 ATC-------------------------- 1359 consensus_16660#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1387 consensus_16660#6 ----------------------------- consensus_16660#4 ----------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||