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Oryza sativa
cluster # 16686 cluster # 16686       Sequences # 39       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16686#0 length = 820 sequences # 4  
consensus_16686#1 length = 816 sequences # 31  
consensus_16686#2 length = 342 sequences # 3  
consensus_16686#3 length = 229 sequences # 1  

consensusID : consensus_16686#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 820
fasta sequence
                              [ATCTCTTGTGTTTGTTGATCGATCGAGGTCGAGGATGCCGAAGAACAAGGGGAAGGGAGGGAAGAACCGGAAGCGGGGGAAGAACGAGGCGGACGACGAGAAGCGGGAGCTGGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGGCGCGGATGCTGGGCAACGGGCGGTGCGAGGCGCAGTGCATCGACGGGACGAAGCGGCTGTGCCACATCCGCGGGAAGATGCACAAGAAGGTGTGGATCGCGGCGGGGGACATCGTCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCTAAAAAAAAAATACTCTGGTTCATGTCTGATCAGTCTCTGTTGTTACACAGTTTTCATTACTTAGGGCTGTAGCCTGTATGCACTGGAACTAATATATTAACAGTATTTAGT]

[+] EMBL AK069347             [ATCTCTTGTGTTTGTTGATCGATCGAGGTCGAGGATGCCGAAGAACAAGGGGAAGGGAGGGAAGAACCGGAAGCGGGGGAAGAACGAGGCGGACGACGAGAAGCGGGAGCTGGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGGCGCGGATGCTGGGCAACGGGCGGTGCGAGGCGCAGTGCATCGACGGGACGAAGCGGCTGTGCCACATCCGCGGGAAGATGCACAAGAAGGTGTGGATCGCGGCGGGGGACATCGTCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCTAGTTTTGTTCTACTCTGGTTCATGTCTGATCAGTCTCTGTTGTTACACAGTTTTCATTACTTAGGGCTGTAGCCTGTATGCACTGGAACTAATATATTAACAGTATTTAGT]
[+] EMBL OSA563657            [                                           AACAAGGGGAAGGGAGGGAAGAACCGGAAGCGGGGGAAGAACGAGGCGGACGACGAGAAGCGGGAGCTGGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGGCGCGGATGCTGGGCAACGGGCGGTGCGAAGCGCAGTGCATCGACGGGACGAAGCGGCTGTGCCACATCCGCGGGAAGATGCACAAGAAGGTGTGGATCGCGGCGGGGGACATCGTCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCTAAAAAAAAAA                                                                                                     ]
[+] EMBL AU174440             [                                                                                                                                                                                                                                                                  CATCGTCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCG                                                                                                                            ]
[+] EMBL AU174441             [                                                                                                                                                                                                                                                                                      GCGACTACCAGGACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCTAAAAAAAAAA                                                                                                     ]


>consensus_16686#0 ATCTCTTGTGTTTGTTGATCGATCGAGGTCGAGGATGCCGAAGAACAAGGGGAAGGGAGG GAAGAACCGGAAGCGGGGGAAGAACGAGGCGGACGACGAGAAGCGGGAGCTGGTGTTCAA GGAGGACGGGCAGGAGTACGCGCAGGTGGCGCGGATGCTGGGCAACGGGCGGTGCGAGGC GCAGTGCATCGACGGGACGAAGCGGCTGTGCCACATCCGCGGGAAGATGCACAAGAAGGT GTGGATCGCGGCGGGGGACATCGTCCTCGTCGGCCTCCGCGACTACCAGGACGACAAGGC CGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGAGAT CCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCCGCCGCCCACGA CGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCATCTACCCACTGC TGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTGCTTCTTGTTAC TTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGATGTGTGAGGTC GTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATTATTCTGCCCAA TAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCTAAAAAAAAAAT ACTCTGGTTCATGTCTGATCAGTCTCTGTTGTTACACAGTTTTCATTACTTAGGGCTGTA GCCTGTATGCACTGGAACTAATATATTAACAGTATTTAGT



consensusID : consensus_16686#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 31
consensus length = 816
fasta sequence
                              [GGCGGACGCGTGGGCGGACGCGTGGGCGGANNGTGGGCGGACGCGTGGGCGGACGCATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT-GG-T-GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT-CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA-GGT-GT--GGATCG-CCGCCGGGGACATCATCC-TCGTCGGCCTCCGCGAC-TACC-AGGACGACAAGGCCGACGTCATCC-TC-AAGTACATGAACGACG-AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC--G-ACACCCTC-AGGCTCAACGA-GGGCG-TCG-ACGTCGAC-GGG-CCCGAGGAC-GGCGGCGACCACG-AC-GAC-TACATCCAG-TTCGAGGACGA-GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC-TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT-TGTCAT-GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTATACATGATGGTTATGCGTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU065445             [GGCGGACGCGTGGGCGGACGCGTGGGCGGANNGTGGGCGGACGCGTGGGCGGANNGTGGGCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACNGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTTCCACATCCGCNGCAAGATGCACAAGAA GGT TT  GGATCT NCGCCGGGGANATCATCC TCGTCGGCCTTCGNGAA TACC AGGACGAAAAGGCCGANGT                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK099441             [                                                     CGCATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGTTCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTATACATGAT                                 ]
[+] EMBL CF291964             [                                                     CGCATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGTGGG  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTG                                                                                                                                                ]
[+] EMBL CF291412             [                                                     CGCATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGC CAAGAAGGGT GTGGGGATCGNCCGCCGGGGACATCATCCNTCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGAGGGGCGTTCG ACGTCGAC GGGCCCCGAGGACGGGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAA                                                                                                                                                                                   ]
[+] EMBL CF281499             [                                                    cCGCATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK120036             [                                                       CATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAATGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGCCAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTATACATGAT                                 ]
[+] EMBL AK119687             [                                                       CATCCCGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGT                                                                  ]
[+] EMBL AU031522             [                                                                ACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAG T GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCCTTC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCCG G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAA GGCGGCGACCACGNAC GACTTACATCCAGTTTCGAGGACGAGGGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGNAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCATGGGNTTGAGGTGGTTAAATAATTGTT                                                                 ]
[+] EMBL AU063065             [                                                                   CCACCGNTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGNCGNCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CTNGGTT GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATTCTCGGCANCGGCCGCTGCGAGGCCAT CTGCNTNGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU063063             [                                                                   CCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA NT GGNT GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OS0574A              [                                                                     ACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OS1321699            [                                                                     ACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CT GGNT GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTNCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGNCGGGGACATCATCC TNGTCGGCCTTCGCGACTTACC AGGACGACAAGG                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS2256A             [                                                                     ACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA NT GG T GTTCAAGGAGGACGGGCAGGAGTACGCNCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TTGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGC                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA754070             [                                                                     ACCGCTCCCAATCTCGATCGGAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTAaaaaaaa                                  ]
[+] EMBL D42611               [                                                                     ACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGNCCGACGACGACAAGCGC  GCT GGNT GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGAT CTCGGCAACGGCC CTGCGA GNCAT CTGCGTCGACGGCACCAAGCNCCTCTGCCACATCCNCTGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL D42894               [                                                                      CCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  NGATCG CCGTCGNGGACATCATCC TCGTCGGTCTCCGNGAC TACC AGGTCGACANGGCCNATGTCATCC TC AAGTAC                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU161764             [                                                                            CCAATCTCGATCGAAACGCGAGGGTTTCGCATCNCCGCCGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGANGGGTAAGAACGAGGCCGACGACGACAAGCGCGAG T GG T GTTCAAGGAGGACGGGCAGGAGTACNCCCAGGTGACGCGGATNCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTNCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC NACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGG                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C27365               [                                                                                          AACGCGAGGGTTTCGCATCTCCGCCNACNCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATNCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGC  NCT GGATAGTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGAT CTCGGCAACNGCCCATGCGAGG CATGCTNCGTCGACn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU063033             [                                                                                              CGAGGGTTTCGCATCTCCGCTGACGCCTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGTCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGA CT GGNT GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTNCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCG CTTCTNAAGGCCTACGGGGAGCTTCCC  G ACAACCTT AAGGTTAACGA GGGCG TNG ACGTCGACGGGG CCCCAGGAC GG                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF291963             [                                                                                                                                        TCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG ACNGAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAAAAAaa                                                                    ]
[+] EMBL OSA563658            [                                                                                                                                                                      AACAAGGGTAAGGGAGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTAaaaaaaa                                  ]
[+] EMBL AA750727             [                                                                                                                                                                                                             AACGAGGCCGACGACGACAAGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACAT CGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTC                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU225910             [                                                                                                                                                                                                                           gccgctGCGCGAGCT GG T GTTCAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGAGGCCAT CTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  GTACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC TAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTACTTGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTAgcgg                                                                                                                                         ]
[+] EMBL BI795690             [                                                                                                                                                                                                                                                                                               GCAAC GCCGCTGCGAGCCCAT C GCGTCGACGGCACCAAGCGCCTCT CCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATC  CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTC TCTTTCTCCGCAGCTAC ATTTACTTGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCATGTGATATGAGATATTGTGTCAT GGTTTGAGGTGGTAAAATAATTGTTGGATTCCGTAAaaaa                                                  ]
[+] EMBL AU161765             [                                                                                                                                                                                                                                                                                                                  tAT CTGCGTCGACGGCACCAAGCGCCTCTGCNACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC NGGACGACAAGGCCGANGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAA GNCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCNG TTCGAGGACGA GGANATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCNGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGANGTGGTTAAATAAaaa                                                                   ]
[+] EMBL C28844               [                                                                                                                                                                                                                                                                                                                                       AGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG NCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGNCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGGCTCCTCAAGGCCTACGGCGAGCTCCCN  G ACACCNTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG C                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF291413             [                                                                                                                                                                                                                                                                                                                                         CGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG ACNGAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAC GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAAaaaaa                                                 ]
[-] EMBL CF281500             [                                                                                                                                                                                                                                                                                                                                                     ATCCGGGGCAAGATGCACAAGAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAN TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTATCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAAATTAGTGAGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAAT                                               ]
[+] EMBL AU223280             [                                                                                                                                                                                                                                                                                                                                                        CGCGGCAAGATGCACAANAA GGT GT  GGATCG CCGCCGGGGACATCATCC TCGTCGGCCTCCGCGAC TACC AGGACGACAAGGCCGACGTCATCC TC AAGTACATGAACGACG AGGCCCGCCTCCTCAAGGCCTACGGCGAGCTCCCC  G ACACCCTC AGGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAAaaa                                                                   ]
[+] EMBL AU092623             [                                                                                                                                                                                                                                                                                                                                                                                                                           GCGAC TTCCTAGGACGACAA GCCGACGTCATCC TCNAAGTACATGAACGACGAAGCCCCGCNTCCTCAAAAGCTACGGTGAACTCCCCCGG ACACCCTCAAGGCTCAACGA GGGCG TCGTACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGACGA GGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTATACATGATGGTTATGCGTAAAAAAAAAAAAAA         ]
[+] EMBL C98078               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCTCAACGA GGGCG TCG ACGTCGAC GGG CCCGAGGAC GGCGGCGACCACG AC GAC TACATCCAG TTCGAGGNCGA GGANATCGCCAAGANCTAAGCTCTTTTNTTCTTTCTCCGCAGCTACAATTTAC TGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCAT GGTTTGAGGTGGTTAAATAATTGTTGGATTCNNTAACTTTAATCTGGTATACATGATGGTTATGCGTAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_16686#1 GGCGGACGCGTGGGCGGACGCGTGGGCGGANNGTGGGCGGACGCGTGGGCGGACGCATCC CGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGC CTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGG AGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCTGGTGTT CAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGA GGCCATCTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA GGTGTGGATCGCCGCCGGGGACATCATCCTCGTCGGCCTCCGCGACTACCAGGACGACAA GGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGA GCTCCCCGACACCCTCAGGCTCAACGAGGGCGTCGACGTCGACGGGCCCGAGGACGGCGG CGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCTCTTTT CTTCTTTCTCCGCAGCTACAATTTACTGCTATGTTCTAATTAATAGCTATGTGTGGTACT ATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATT TGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAATCTGGTATACAT GATGGTTATGCGTAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16686#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 342
fasta sequence
                              [GCCTCCTCAAGGCCTACGGCGAGCTCCCCGACACCCTCAGGCTCAACGAGGGCGTCGACGTCGACGGGCCCGAGGACGGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTACTGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATTTGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAA----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU070748             [GCCTCCTCAAGGCCTACGGCGAGCTCCCCGACACCCTCAGGCTCAACGAGGGCGTCGACGTCGACGGGCCCGAGGACGGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTACTGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATTTGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAA    AAAAAAAAAAAAAAAAAAAAAA                ]
[+] EMBL AU093118             [                                                   GCGTCGACGTCGACGGGCCCGAGGACGNCGGCGACCACGACGACTACNTCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCNGCTACAATTTACTGNTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATTTGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAA    AAAA                                  ]
[+] EMBL AU031523             [                                                                     CCGAGGACGGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTANAATTTACTGCTATGTTCTAATTAATAGCTATGTGTGGTACTATGTGGGNTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATGAGATATTTGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCCGTAACTTTAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAA]


>consensus_16686#2 GCCTCCTCAAGGCCTACGGCGAGCTCCCCGACACCCTCAGGCTCAACGAGGGCGTCGACG TCGACGGGCCCGAGGACGGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACA TCGACAAGATCTAAGCTCTTTTCTTCTTTCTCCGCAGCTACAATTTACTGCTATGTTCTA ATTAATAGCTATGTGTGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTT TCATCTTGTGATATGAGATATTTGTCATGGTTTGAGGTGGTTAAATAATTGTTGGATTCC GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_16686#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 229
fasta sequence
                              [GCTTTCGCATCTCCCCCGACGCCTNGNNGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAANNNAGGGAAGAACCGCAAGANGGGTAAGACCGAGGCCGACGACGACAAGCNCGACTGGNTGTCCAANGAGGACGGGCAGGAGTACGCCCAGGTGANGAGGATGCCCGGNAACGGNCGCTGCNAGGCCATCTCCNTCGANGGNANCAAGNN]

[+] EMBL D50570               [GCTTTCGCATCTCCCCCGACGCCTNGNNGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAANNNAGGGAAGAACCGCAAGANGGGTAAGACCGAGGCCGACGACGACAAGCNCGACTGGNTGTCCAANGAGGACGGGCAGGAGTACGCCCAGGTGANGAGGATGCCCGGNAACGGNCGCTGCNAGGCCATCTCCNTCGANGGNANCAAGNN]


>consensus_16686#3 GCTTTCGCATCTCCCCCGACGCCTNGNNGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCA TGCCGAAGAACAAGGGTAANNNAGGGAAGAACCGCAAGANGGGTAAGACCGAGGCCGACG ACGACAAGCNCGACTGGNTGTCCAANGAGGACGGGCAGGAGTACGCCCAGGTGANGAGGA TGCCCGGNAACGGNCGCTGCNAGGCCATCTCCNTCGANGGNANCAAGNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      GGCGGACGCGTGGGCGGACGCGTGGGCGGANNGTGGGCGGACGCGTGGGCGGACGCATCC 60
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      CGCAACTCCACCGCTCCCAATCTCGATCGAAACGCGAGGGTTTCGCATCTCCGCCGACGC 120
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      CTAGAGGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAAGGG 180
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      AGGGAAGAACCGCAAGAGGGGTAAGAACGAGGCCGACGACGACAAGCGCGAGCTGGTGTT 240
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      CAAGGAGGACGGGCAGGAGTACGCCCAGGTGACGCGGATGCTCGGCAACGGCCGCTGCGA 300
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      GGCCATCTGCGTCGACGGCACCAAGCGCCTCTGCCACATCCGCGGCAAGATGCACAAGAA 360
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ------------------------------------------------------------
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      GGTGTGGATCGCCGCCGGGGACATCATCCTCGTCGGCCTCCGCGACTACCAGGACGACAA 420
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      -----------------------------------------------------------A 1
consensus_16686#3      -----------------------------------------GCTTTCGCATCTCCCCCGA 19
consensus_16686#1      GGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCCTACGGCGA 480
consensus_16686#2      --------------------------------------GCCTCCTCAAGGCCTACGGCGA 22
                                                                                  *

consensus_16686#0      TCTCTTGTGTTTG------TTGATCGATCGAGGTCGAGG-ATGCCGAAGAACAAGGGGAA 54
consensus_16686#3      CGCCTNGNNGAAGAAGGGATCCGCCGCCGGTAGCCAAGCCATGCCGAAGAACAAGGGTAA 79
consensus_16686#1      GCTCCCCGACACCCT----CAGGCTCAACGAGGGCGTCG-ACGTCGACGGGCCCGAGGAC 535
consensus_16686#2      GCTCCCCGACACCCT----CAGGCTCAACGAGGGCGTCG-ACGTCGACGGGCCCGAGGAC 77
                          *                         *  * *     * * *** *  *  * * * 

consensus_16686#0      GGGAGGGA-----AGAACCGGAAGCGGGGGAAGAACGAGGCGGACGACGAGAAGCGGGAG 109
consensus_16686#3      NNNAGGGA-----AGAACCGCAAGANGGGTAAGACCGAGGCCGACGACGACAAGCNCGAC 134
consensus_16686#1      GGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCT 595
consensus_16686#2      GGCGGCGACCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTAAGCT 137
                           * **     *  **   *    *    **  *****    **** * *     *  

consensus_16686#0      CTGGTGTTCAAGGAGGACGGGCAGGAGTACGCGCAGGTGGCGCGGATGCTGGGCAACGGG 169
consensus_16686#3      TGGNTGTCCAANGAGGACGGGCAGGAGTACGCCCAGGTGANGAGGATGCCCGGNAACGGN 194
consensus_16686#1      CTTTTCTTCTTTCTCCGCAGCTACAATTTACTGCTAT--GTTCTAATTAATAGCTATGTG 653
consensus_16686#2      CTTTTCTTCTTTCTCCGCAGCTACAATTTACTGCTAT--GTTCTAATTAATAGCTATGTG 195
                           * * *        * *  *  * *     *           **     *  * *  

consensus_16686#0      CGGTGCGAGGCGCAGTGCATCGACGGGACGAAGCGGCTGTGCCACATCCGCGGGAAGATG 229
consensus_16686#3      CGCTGCNAGGCCATCTCCNTCGANGGNANCAAGNN------------------------- 229
consensus_16686#1      TGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATG 713
consensus_16686#2      TGGTACTATGTGGGCTGGCTGTTATGGATTGTTTGGTTGCCGGTTTCATCTTGTGATATG 255
                        * * * * *     *   *     * *                                

consensus_16686#0      CACAAGAAGGTGTGGATCGCGGCGGGGGACATCGTCCTCGTCGGCCTCCGCGACTACCAG 289
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      AGATATTTGTCATGGTTTGAGGTGGTTAA----ATAATTGTTGGATTCCGTAACTTTAAT 769
consensus_16686#2      AGATATTTGTCATGGTTTGAGGTGGTTAA----ATAATTGTTGGATTCCGTAA------- 304
                                                                                   

consensus_16686#0      GACGACAAGGCCGACGTCATCCTCAAGTACATGAACGACGAGGCCCGCCTCCTCAAGGCC 349
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      CTGGTATACATGATGGTTATGCGTAAAAAAAAAAAAAAAAAAAAAAA------------- 816
consensus_16686#2      ---------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------- 342
                                                                                   

consensus_16686#0      TACGGCGAGATCCCCGACCACGTCCGCCTCAACGAGGGCGTCGTCGACGAGGACGACGCC 409
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      GCCGCCCACGACGACTACATCCAGTTCGAGGACGAGGACATCGACAAGATCTGATCTCAT 469
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      CTACCCACTGCTGCTGCTGCTTCATCAGTCCAATGGTACAAAGAAACAATCCAAGAATTG 529
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      CTTCTTGTTACTTGCTACTATTGTGATGTGTGGTGTGATATTATAATCACGGTGGTGTGA 589
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      TGTGTGAGGTCGTCTGCCTGAGAGAGACCTGTATATATGGAAGAGATTCGGGGGGCAATT 649
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      ATTCTGCCCAATAATCAAATATTGAATCGAATTGCTCGCTTTACGCGATGGGGTTCATCT 709
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      AAAAAAAAAATACTCTGGTTCATGTCTGATCAGTCTCTGTTGTTACACAGTTTTCATTAC 769
consensus_16686#3      ------------------------------------------------------------
consensus_16686#1      ------------------------------------------------------------
consensus_16686#2      ------------------------------------------------------------
                                                                                   

consensus_16686#0      TTAGGGCTGTAGCCTGTATGCACTGGAACTAATATATTAACAGTATTTAGT 820
consensus_16686#3      ---------------------------------------------------
consensus_16686#1      ---------------------------------------------------
consensus_16686#2      ---------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)