Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1673 cluster # 1673       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1673#0 length = 1045 sequences # 2  

consensusID : consensus_1673#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1045
fasta sequence
                              [TTGCACAAACTCCTTTAAAACCACGCCACCCGCCGCCGACGACGAGACCCTTTCCCTCCGTTTCCACACACCTCTCTCTCTCTCTTCTTCTTCTCCGATGGCCTCCTCCGCGCGCGACCTCTCCGGCGACCCACCGGAGTCCACCCGGCTGCGGATCGGCGACGACATCGCCTGGTCGGACGTGGGCGGCGTCTACGACCGCGACGACTCGCTCAAGGAGAACACCAACCCCAAGTGCATCCTCAAGAACCACCTCCCCGGCGCCCACAACGGCGGGTCGCAGAGGTTCTCCGGCAACCTCAAGCCCACGGCGGCGCCCATCATCGGGATATCGGGGAAGCTCGGGCAGGGCGGCAAGAACCGCCACCACCCGCCGGCGATGTTCCCCAAGAAGGTGGCCGTCACGGGAGGCGGCGGCCGCAACCCCAAGGCGGCCGTCCCCGAGCACGAGCCGACGTCGCCCAAGGTCTCCTGCATCGGCAAGGTCCTCTCCGACCGTGAGCGCGCGCGCCGGGGTCGCCGGCCGGCGGGGCGGATGGTCCCCGCCGGTGGCTGCTGCCCCGGGCTCGGCGGTCTGTTCCGCCGGAGTCACTCGCGGAAGAAGAACGCCGTGGAGTGCGTCGACCAGTCCCCGCCTCCGCTGCCTCCATGGGCGTCGAGGCGGGGAGAGCCGAAGGAGGTCAAGGAGGCGACGCCGGCGGCGGCGGCGGCGATGGCGCCGGGGTTGGGAGGGATGATGCGGTTCGCGTCGGGGAGGCGGGCGGCGGATTGGGCGACCGAGATGGAGCCGGATGGACGCGTGGCGAGATCTGGGCCGTTGTAGTAGAGGACTATTTGGGTTTGGTACGAGTCTCTGTTGCTGTTAGTTGGTGCCAGTGCTTTCGGTGTAGTTGAGATGTGTACATACTGCAGTTAGGACACATTTTTTTGGGCTCCTTCTCCATTTAATTTTTGTTTAATTTTTTTGGCTTGTTTTTGTCTGTTGAGATTTGAATAGTTTGTTGGGTTGGAGTGTTGTATGAAAACTATCAGAAGATTTCGTATT]

[+] EMBL AK060118             [TTGCACAAACTCCTTTAAAACCACGCCACCCGCCGCCGACGACGAGACCCTTTCCCTCCGTTTCCACACACCTCTCTCTCTCTCTTCTTCTTCTCCGATGGCCTCCTCCGCGCGCGACCTCTCCGGCGACCCACCGGAGTCCACCCGGCTGCGGATCGGCGACGACATCGCCTGGTCGGACGTGGGCGGCGTCTACGACCGCGACGACTCGCTCAAGGAGAACACCAACCCCAAGTGCATCCTCAAGAACCACCTCCCCGGCGCCCACAACGGCGGGTCGCAGAGGTTCTCCGGCAACCTCAAGCCCACGGCGGCGCCCATCATCGGGATATCGGGGAAGCTCGGGCAGGGCGGCAAGAACCGCCACCACCCGCCGGCGATGTTCCCCAAGAAGGTGGCCGTCACGGGAGGCGGCGGCCGCAACCCCAAGGCGGCCGTCCCCGAGCACGAGCCGACGTCGCCCAAGGTCTCCTGCATCGGCAAGGTCCTCTCCGACCGTGAGCGCGCGCGCCGGGGTCGCCGGCCGGCGGGGCGGATGGTCCCCGCCGGTGGCTGCTGCCCCGGGCTCGGCGGTCTGTTCCGCCGGAGTCACTCGCGGAAGAAGAACGCCGTGGAGTGCGTCGACCAGTCCCCGCCTCCGCTGCCTCCATGGGCGTCGAGGCGGGGAGAGCCGAAGGAGGTCAAGGAGGCGACGCCGGCGGCGGCGGCGGCGATGGCGCCGGGGTTGGGAGGGATGATGCGGTTCGCGTCGGGGAGGCGGGCGGCGGATTGGGCGACCGAGATGGAGCCGGATGGACGCGTGGCGAGATCTGGGCCGTTGTAGTAGAGGACTATTTGGGTTTGGTACGAGTCTCTGTTGCTGTTAGTTGGTGCCAGTGCTTTCGGTGTAGTTGAGATGTGTACATACTGCAGTTAGGACACATTTTTTTGGGCTCCTTCTCCATTTAATTTTTGTTTAATTTTTTTGGCTTGTTTTTGTCTGTTGAGATTTGAATAGTTTGTTGGGTTGGAGTGTTGTATGAAAACTATCAGAAGATTTCGTATT]
[+] EMBL AK102576             [                                                         CCGTTTCCACACACCTCTCTCTCTCTCTTCTTCTTCTCCGATGGCCTCCTCCGCGCGCGACCTCTCCGGCGACCCACCGGAGTCCACCCGGCTGCGGATCGGCGACGACATCGCCTGGTCGGACGTGGGCGGCGTCTACGACCGCGACGACTCGCTCAAGGAGAACACCAACCCCAAGTGCATCCTCAAGAACCACCTCCCCGGCGCCCACAACGGCGGGTCGCAGAGGTTCTCCGGCAACCTCAAGCCCACGGCGGCGCCCATCATCGGGATATCGGGGAAGCTCGGGCAGGGCGGCAAGAACCGCCACCACCCGTCGGCGATGTTCCCCAAGAAGGTGGCCGTCACGGGAGGCGGCGGCCGCAACCCCAAGGCGGCCGTCCCCGAGCACGAGCCGACGTCGCCCAAGGTCTCCTGCATCGGCAAGGTCCTCTCCGACCGTGAGCGCGCGCGCCGGGGTCGCCGGCCGGCGGGGCGGATGGTCCCCGCCGGTGGCTGCTGCCCCGGGCTCGGCGGTCTGTTCCGCCGGAGTCACTCGCGGAAGAAGAACGCCGTGGAGTGCGTCGACCAGTCCCCGCCTCCGCTGCCTCCATGGGCGTCGAGGCGGGGAGAGCCGAAGGAGGTCAAGGAGGCGACGCCGGCGGCGGCGGCGGCGATGGCGCCGGGGTTGGGAGGGATGATGCGGTTCGCGTCGGGGAGGCGGGCGGCGGATTGGGCGACCGAGATGGAGCCGGATGGACGCGTGGCGAGATCTGGGCCGTTGTAGTAGAGGACTATTTGGGTTTGGTACGAGTCTCTGTTGCTGTTAGTTGGTGCCAGTGCTTTCGGTGTAGTTGAGATGTGTACATACTGCAGTTAGGACACATTTTTTTGGGCTCCTTCTCCATTTAATTTTTGTTTAATTTTTTTGGCTTGTTTTTGTCTGTTGAGATTTGAATAGTTTGTTGGGTTGGA                                  ]


>consensus_1673#0 TTGCACAAACTCCTTTAAAACCACGCCACCCGCCGCCGACGACGAGACCCTTTCCCTCCG TTTCCACACACCTCTCTCTCTCTCTTCTTCTTCTCCGATGGCCTCCTCCGCGCGCGACCT CTCCGGCGACCCACCGGAGTCCACCCGGCTGCGGATCGGCGACGACATCGCCTGGTCGGA CGTGGGCGGCGTCTACGACCGCGACGACTCGCTCAAGGAGAACACCAACCCCAAGTGCAT CCTCAAGAACCACCTCCCCGGCGCCCACAACGGCGGGTCGCAGAGGTTCTCCGGCAACCT CAAGCCCACGGCGGCGCCCATCATCGGGATATCGGGGAAGCTCGGGCAGGGCGGCAAGAA CCGCCACCACCCGCCGGCGATGTTCCCCAAGAAGGTGGCCGTCACGGGAGGCGGCGGCCG CAACCCCAAGGCGGCCGTCCCCGAGCACGAGCCGACGTCGCCCAAGGTCTCCTGCATCGG CAAGGTCCTCTCCGACCGTGAGCGCGCGCGCCGGGGTCGCCGGCCGGCGGGGCGGATGGT CCCCGCCGGTGGCTGCTGCCCCGGGCTCGGCGGTCTGTTCCGCCGGAGTCACTCGCGGAA GAAGAACGCCGTGGAGTGCGTCGACCAGTCCCCGCCTCCGCTGCCTCCATGGGCGTCGAG GCGGGGAGAGCCGAAGGAGGTCAAGGAGGCGACGCCGGCGGCGGCGGCGGCGATGGCGCC GGGGTTGGGAGGGATGATGCGGTTCGCGTCGGGGAGGCGGGCGGCGGATTGGGCGACCGA GATGGAGCCGGATGGACGCGTGGCGAGATCTGGGCCGTTGTAGTAGAGGACTATTTGGGT TTGGTACGAGTCTCTGTTGCTGTTAGTTGGTGCCAGTGCTTTCGGTGTAGTTGAGATGTG TACATACTGCAGTTAGGACACATTTTTTTGGGCTCCTTCTCCATTTAATTTTTGTTTAAT TTTTTTGGCTTGTTTTTGTCTGTTGAGATTTGAATAGTTTGTTGGGTTGGAGTGTTGTAT GAAAACTATCAGAAGATTTCGTATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)