These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 819 fasta sequence [GACCTGACTGGACTGAAGGAGTAGAAA-TTCCTCCTCCTCCTCCCGTCTCGGAAGCCACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC-TGATCAGCGAGATCCGGGGGATGAAGGTGC-GGGAGGTGCCGGGGTACCTGAAGCCGC-GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC-TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC-CTCGCCCACCTCGAGGAGCTCGAGA-GGCAGGGCG-CCGCCGG-CGCCGCCCACCACT-AGATCCGAGGTCAGGACTT-GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG-TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTTTTGATG-CAGTTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAGCTTGCAAGA] [+] EMBL CF279283 [GACCTGACTGGACTGAAGGAGTAGAAA CCT T T TCCCGTCTCGGAAGCC CC ATTTTTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTTTTTTTAGCCGC GGCTGAGCTGGGATAACGTGAAGAAGAGCAGC TTTTTTTCGTCGACCGCTACATCTACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGA ] [+] EMBL CF334824 [ CTGAAGGAGTAGAAACTTCCTCCTCCTCCTCCCGTCTCGGAAGCCACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGGTGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAA ] [+] EMBL CF291869 [ gagtagaaaCTCCTCCCGTCTCGGAAGCCACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGAGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGAGGGCAGGGCGNCCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTTGGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGA ] [+] EMBL CF291656 [ AGCCACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGG GAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAG ] [+] EMBL AK120215 [ AGCCACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCG AGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTTTTGATG CAGTTTGTATGTCATTAATCACGTGGTGA ] [+] EMBL AU029283 [ ACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCANCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCGGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTTACATTCCTATGCATCTTATCATAAGCAACTTCAA ] [+] EMBL AU165909 [ ACCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTCCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCACTTTTGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGGCCGGC CCCACCACTAAGATCCGAaggat ] [+] EMBL OS0421A [ CCAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCT ATCAACCT CCCAAGGAGCGCCG CAN CTTG CCA CTTGAGGAGgt ] [+] EMBL AU065669 [ CAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGANCCGCTCTTCCACGTCATCTACGGCCTCATGG CTTCTCC TACCTCATCAACCT CCCAAGG ] [+] EMBL AU063106 [ CAAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGNAGCCGCTCTTCCACGTCATCTACGGCCTCATTGGCTTCTCCTTACCTCATCAACCTCC ] [+] EMBL AU082995 [ GACGTTGCGA GAAGGGGAAGAGGAGAG TCGAGTTCGGAGAGATCCATCCATGGCGNTGCGAGCCCTTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGGAGGTGCCGGGGTACCTGAAGCCGCGGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGGTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTAaaaaa ] [+] EMBL CB683806 [ CGAGGTTGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCC TGATCAGCGAGATCCGGGGGATGAAGGTGC GGGAGGTGCCGGGGTACCTGAAGCCGC GGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCC TACCTCATCAACCTCCCCAAGGAGCGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCAGGGCG CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTTTTGATG CAGTTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAGCTTGCAAGA] [+] EMBL AU031957 [ CGCCGCCAC CTCGCCCACCTCGAGGAGCTCGAGA GGCANGGC CCGCCGG CGCCGCCCACCACT AGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGNTGATTCGANCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGC AAAAACTTTCCAGTTTATTG TTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTTTTGATGACAGNTTGTATGTCATTAATCACGTGGTGA TTTGT GCC TTTCTTAAaa ] consensusID : consensus_16767#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 762 fasta sequence [TGCGCCCTTAAGAGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGGTTTGATGCAGCTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAATAAAAAATAAATTTTACAATAATAATTATAATTTT] [+] EMBL CB685267 [TGCGCCCTTAAGAGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGGTTTGATGCAGCTTGTATGTCATTA ] [+] EMBL BE040010 [ GCTACATGGAGGAGGGCATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTTTTGATGCAGTTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAATAAAAAATAAATTTTACAATAATAATTATAATTTT] [+] EMBL AU183979 [ ACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTCGTTTAATGTATTTCCCTGCCTTTCTCATCTTAaaaaaa ] consensusID : consensus_16767#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 628 fasta sequence [AGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCG-AGATCCGGGGGATGAAGGTGCGGG-AGGTGCCGGGGTACCTG-AAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGG-CAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTC-GGTTAATGTATTTCCCTGCCTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BE039703 [AGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCG AGATCCGGGGGATGAAGGTGCGGG AGGTGCCGGGGTACCTG AAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGG CAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAATGACAGCTTTGTCGGTC GGTTAATGTATTTCCCTGCCTTTCTCAAAAAAAAAAAA ] [+] EMBL AU030316 [ CGCTGCGANCCCTGATCAGCGAAGATCCGGGGNATGAAGGTGCGGGAAGGTGCCGGGGTACNTGAAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTAC GCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCCAGGGC CCGCCGGCGCCGCCCACCACTAGATCCG AGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAAaaa ] [-] EMBL CF291655 [ GAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCTAAaaaaa ] [+] EMBL AU198075 [ TACCTGGAGTTGTGATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATNTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTNTAATGACAGCTTTGTCGGTCTGTTTAATGTATTTCCCTGCCTTTNTCCAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_16767#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 624 fasta sequence [AAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC-GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA-GCCGCTCTTCCACGTCATCTACGGCCTCATGG-CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC-CT-CGAGG-AGC-TCGAGAGGCAGGGCGC-C-G-CCGGCGCCGCCCA-CCACTAGATCCGAGGTCAGGACTT-GGGGTTTGTCTGTGGTTGATTCGATC-TAACAGAATTTCTGTTCTTCC-ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT-GGTTT-ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT-GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAAAAAAAAAAAN] [+] EMBL CA758767 [AAACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C G CCGGCGCCGCCCA CCACTAGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAAAAAAAAA ] [+] EMBL OSR2251A [ AACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CTTCTNCTACCTCATCAACCTNCCCA ] [+] EMBL OSR0309A [ccgCCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGNCAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG NCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGNCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C GACCGG G CGCCCA CCACTAGATCCGAGGTCAGGACTT GGG ] [+] EMBL OSR2845A [ TAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGGNCTTTCTCCTACCTCATCAACCTCCCCAAGGAGCGNCGNCAACTNGNCCAC CT CGAGG AGCTTCGAGAGGCAGGGCGC ] [+] EMBL OSS15557A [ CCGCGAGCCCTGACGTTGCGAGGAAGGGTAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGTCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C G CCGGGGC TCCA CCACTAGATCCGAGGTCAGGACTTNGGGGTTTGTTTGTGGTTGATTCGATCTTAACAGAATTTCTGTTCTTCCAACCGATGAGCTANCTGGAGTTGTGATGATGTTCGTTTNAT GGTTTAATTTTGTAC ] [+] EMBL AU160975 [ CGCGAGCCCTNACGNTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C G C ] [+] EMBL AU075428 [ TGACGTNGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTNCGGGAGGTNCCGGGGTACCTGAAGCCGCGGCTNAGCTNGGAGAACGTGAAGAAGAGCAGCGACCAGNCCGTC GACCGNTACATCGACAAGTACATNGAGACCAGNTCGNCGGA GCCGNTCTTCCACGTCATCT ] [+] EMBL C74223 [ GACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACNTCGCCCAC CT CGAGGAAGC TCGAna ] [+] EMBL OSC025 [ GTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAG CCTGATCAGCGAGATCCGGGGGATGAAGGTNCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTNAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGACGGA CCGCTCTTCCACGTCATCTACGGCCTCATNG CTGTCTCCTACCTCATCAACCTTCCCAAGGAGCGTCGTCACCTCGTCCAC CTNGGAGG AGC T ] [+] EMBL C28097 [ AGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTNATCAGCGAGATCCGNGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGNCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGNC GACCGCTACATCGNCAAGTACATCGAGACCAGNTNGNCGGA GCCGCTCTTCCACGTCATCT ] [+] EMBL AU030967 [ GGGGAAGAGNAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGANCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGNGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTCCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCCAGG NC C G CCGGCGCCGCCCA CCACTAGATCCG AGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAA ] [+] EMBL AK058292 [ GGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C G CCGGCGCCGCCCA CCACTAGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAGCTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGA ] [+] EMBL C98034 [ CCGCGGCTGAGCTGGGAGAACNTGAAGAAGANCAGCGACCAGNCCGTC GACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGA GCCGCTCTTCCACGTCATCTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGG GC C G CCGGCGCCGCCCA CCACTAGATCCG AGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAAAAA ] [+] EMBL BI805343 [ caGCCTTCTGACCGTTACATCGACAAGTACATCGAGACCAGTTCGCCGGATGCCGCTCTTCCACGTCAATTACGGCCTCATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACTTCGCCCACTCT CGAGG AGC TCGAGAGGCAGGGCGCACTG CCGGCGCCGCCCA CCACTAGATCCG AGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGATGGGTTT ATTTTGTACGGAAAGTCAGC AAAAACTTTCCAGTTTATTGGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAAAAAA ] [+] EMBL AU029443 [ ATGG CCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAAGG GC C G CCGGCGCCGCCCA CCACTAGATCCG AGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATAAAAAAAAAAAAAAAN] [-] EMBL CF279282 [ CCCCAAGGAGCGCCGCCACCTCGCCCAC CT CGAGG AGC TCGAGAGGCAGGGCGC C G CCGGCGCCGCCCACCCACTAGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATAAAAAAA ] [-] EMBL D42511 [ CA CCACTAGATCCGAGGTCAGGACTT GGGGTTTGTCTGTGGTTGATTCGATC TAACAGAATTTCTGTTCTTCC ACCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGAT GGTTT ATTTTGTACGGAAAGTCAGC AAAAACTTTCCAGTTTATT GTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAG ACAGC ] consensusID : consensus_16767#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence [GCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGTGAGGGTTCCCCCGTCTCCTTGCCTCCCCTGATCTGATCTGGGATTTTCCCCGATTGTTTCGTTCGGTGCCGTTGGGATGGTTAGATTGGAAATGTTAGCTATGGAGATATGAGGAAATGTTTCTATTCTTAAAATCTATCACGAGTGGTTGGGGATTTTTTTTTAATGCATTTCAATCACGGTGCAGGAGAGGGATCTGGATTATTATAGGGAAAAAAGTGATACTAGCTTTTCANNAGTAAGTTTAATTAGTTTTTCATAGAATTAAATTTGTTTCATAGGAAAAAACNNNTGATTNNNAATTTTTTGTTTTTTAANNNNNNACTTTGANNNNNANTTTTTTTGGATCGTATGTTGCTCCATTNNNNNN] [+] EMBL CF196553 [GCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGTGAGGGTTCCCCCGTCTCCTTGCCTCCCCTGATCTGATCTGGGATTTTCCCCGATTGTTTCGTTCGGTGCCGTTGGGATGGTTAGATTGGAAATGTTAGCTATGGAGATATGAGGAAATGTTTCTATTCTTAAAATCTATCACGAGTGGTTGGGGATTTTTTTTTAATGCATTTCAATCACGGTGCAGGAGAGGGATCTGGATTATTATAGGGAAAAAAGTGATACTAGCTTTTCANNAGTAAGTTTAATTAGTTTTTCATAGAATTAAATTTGTTTCATAGGAAAAAACNNNTGATTNNNAATTTTTTGTTTTTTAANNNNNNACTTTGANNNNNANTTTTTTTGGATCGTATGTTGCTCCATTNNNNNN] consensusID : consensus_16767#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence [TGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTTTTCCACGTCATTTACGGCCTCATGGCCTTTTCCTACCTCATCAACCTCCCCAAGGAGGGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTTTGTTTTTCCCCCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGGTGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAAAAAAAAAAAAAA] [-] EMBL CF334823 [TGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTTTTCCACGTCATTTACGGCCTCATGGCCTTTTCCTACCTCATCAACCTCCCCAAGGAGGGCCGCCACCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTTTGTTTTTCCCCCGATGAGCTACCTGGAGTTGTGATGATGTTCGTTTGGTGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTATTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAAAAAAAAAAAAAA] consensusID : consensus_16767#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 375 fasta sequence [CAGCTTCTCCCTCACACTCCCAAGAGCCCCCCTCCCCCCTCGAGAGCTCGAGAGCAGGGCCCCCGCCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCCCGATGAGCTACCTGGAGTTGTGATGATGTTCTTTGATGGTTATTTGTACGGAATCACAAACTTTCCGTTTATGTACATCCTAGCATCTTCATAACACTCAACTGGAAGTGCATGCTGTGATAAAACTTTCATAATTGAGCACACTGCTCGATATATACTCTAATGACACCTTTCGTCTTTAATGTATTCCCCCTTCTCATCTATAGCATAACATTCATCTGCTTGTTTGA] [+] EMBL BI806323 [CAGCTTCTCCCTCACACTCCCAAGAGCCCCCCTCCCCCCTCGAGAGCTCGAGAGCAGGGCCCCCGCCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCCCGATGAGCTACCTGGAGTTGTGATGATGTTCTTTGATGGTTATTTGTACGGAATCACAAACTTTCCGTTTATGTACATCCTAGCATCTTCATAACACTCAACTGGAAGTGCATGCTGTGATAAAACTTTCATAATTGAGCACACTGCTCGATATATACTCTAATGACACCTTTCGTCTTTAATGTATTCCCCCTTCTCATCTATAGCATAACATTCATCTGCTTGTTTGA] consensusID : consensus_16767#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 241 fasta sequence [CAAAAGANTCNCCAGCGTTATTGTTACATTCCTATGCATCTTATCATAAGCAAGCTGCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTGTCAGTTAATTTCNGCACAGCTGCTTCGANATCTACNCTAATGACAGCTTTGTCGGTCGCGTAATGTATTTCCCTGCCGTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTNTTGATGCAGTTTGTATGNCATTAATCACGT] [+] EMBL OSS11125A [CAAAAGANTCNCCAGCGTTATTGTTACATTCCTATGCATCTTATCATAAGCAAGCTGCAAACTGGAAGTGCATGCATTGTGATTAAAAACTTTGTCAGTTAATTTCNGCACAGCTGCTTCGANATCTACNCTAATGACAGCTTTGTCGGTCGCGTAATGTATTTCCCTGCCGTTCTCATCTTATAGGCATAACATTTGCATCTGCTTTGTNTTGATGCAGTTTGTATGNCATTAATCACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_16767#1 ------------------------------------------------------------ consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 GACCTGACTGGACTGAAGGAGTAGAAATTCCTCCTCCTCCTCCCGTCTCGGAAGCCACCA 60 consensus_16767#2 ------------------------------------------------------------ consensus_16767#3 ------------------------------------------------------------ consensus_16767#5 ------------------------------------------------------------ consensus_16767#4 ------------------------------------------------------------ consensus_16767#1 -----------------------TGCGCCCTTAAGAGAAGAGGAGAGATCGAGATCGGAG 37 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 AACCCTAGCCGCGAGCCCTGACGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAG 120 consensus_16767#2 ------------------------------------------------------------ consensus_16767#3 ------------------------------------------------------------ consensus_16767#5 ------------------------------------------------------------ consensus_16767#4 ------------------------------------------------------------ consensus_16767#1 AGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGA 97 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 AGATCCATCCATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGA 180 consensus_16767#2 ------------------------------------------------------------ consensus_16767#3 --------------------------------------AAACCCTAGCCGCGAGCCCTGA 22 consensus_16767#5 ------------------------------------------------------------ consensus_16767#4 ------------------------------------------------------------ consensus_16767#1 GGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCA 157 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 GGTGCCGGGGTACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCA 240 consensus_16767#2 -------------------------------------AGAGATCCATCCATGGCGCTGCG 23 consensus_16767#3 CGTTGCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCG 82 consensus_16767#5 --------------------------------------------------TGGCGCTGCG 10 consensus_16767#4 ------------------------------------------------------------ consensus_16767#1 GGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCA 217 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 GGCCGTCGACCGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCA 300 consensus_16767#2 AGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCC 83 consensus_16767#3 AGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCC 142 consensus_16767#5 AGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCC 70 consensus_16767#4 ------------------------------------------------------------ consensus_16767#1 CGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCA 277 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 CGTCATCTACGGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCA 360 consensus_16767#2 GCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGA 143 consensus_16767#3 GCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGA 202 consensus_16767#5 GCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGA 130 consensus_16767#4 --------GCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGA 52 consensus_16767#1 CCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGAT 337 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------------------------------------------------------ consensus_16767#0 CCTCGCCCACCTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGAT 420 consensus_16767#2 CAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGC 203 consensus_16767#3 CAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGC 262 consensus_16767#5 CAAGTACATCGAGACCAGCTCGCCGGAGCCGCTTTTCCACGTCATTTACGGCCTCATGGC 190 consensus_16767#4 CAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGC 112 consensus_16767#1 CCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTT 397 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 ------------CAGCTTCTCCCTCACACTCCCAAGAGCCCCCCTCCCCCCTCGAGAGCT 48 consensus_16767#0 CCGAGGTCAGGACTTGGGGTTTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTT 480 consensus_16767#2 CTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCT 263 consensus_16767#3 CTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCT 322 consensus_16767#5 CTTTTCCTACCTCATCAACCTCCCCAAGGAGGGCCGCCACCTCGCCCACCTCGAGGAGCT 250 consensus_16767#4 CTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCT 172 consensus_16767#1 CCACCGATGAGCTACCTGG-----AGTTGTGA-TGATGTTCGTTTGATGGTTTATTTTGT 451 consensus_16767#7 ------------------------------------------------------------ consensus_16767#6 CGAGAGCAGGGCCCCCGCC-----CGCCCACC-ACTAGATCCGAGGTCAGGACTTGGGGT 102 consensus_16767#0 CCACCGATGAGCTACCTGG-----AGTTGTGA-TGATGTTCGTTTGATGGTTTATTTTGT 534 consensus_16767#2 CGAGAGGCAGGGCGCCGCCGGCGCCGCCCACC-ACTAGATCCGAGGTCAGGACTTGGGGT 322 consensus_16767#3 CGAGAGGCAGGGCGCCGCCGGCGCCGCCCACC-ACTAGATCCGAGGTCAGGACTTGGGGT 381 consensus_16767#5 CGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCCACTAGATCCGAGGTCAGGACTTGGGGT 310 consensus_16767#4 CGAGAGGCAGGGCGCCGCCGGCGCCGCCCACC-ACTAGATCCGAGGTCAGGTGAGGGTTC 231 consensus_16767#1 ACGGAAAGTCAGCAAAAAACTTTCCAGT-TTATTGTTACATT-CCTATGCAT--CTTATC 507 consensus_16767#7 ------------CAAAAGANTCNCCAGCGTTATTGTTACATT-CCTATGCAT--CTTATC 45 consensus_16767#6 TTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCC-CCGATGAGCTACCTGGA 161 consensus_16767#0 ACGGAAAGTCAGCAAAAAACTTTCCAGT-TTATTGTTACATT-CCTATGCAT--CTTATC 590 consensus_16767#2 TTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGA 382 consensus_16767#3 TTGTCTGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGA 441 consensus_16767#5 TTGTCTGTGGTTGATTCGATCTAACAGAATTTTTGTTTTTCCCCCGATGAGCTACCTGGA 370 consensus_16767#4 CCCCGTCTCCTTGCCTCCCCTGATCTGATCTGGGATTTTCCC-CGATTGTTTCGTTCGGT 290 * * * ** * ** consensus_16767#1 ATAAGCAA-CTT-CAA-ACTGGAAGTGCATGCATTGTG-------ATTAAAAACTTTTTC 557 consensus_16767#7 ATAAGCAAGCTG-CAA-ACTGGAAGTGCATGCATTGTG-------ATTAAAAACTTTGTC 96 consensus_16767#6 GTTGTGATGATG-TTC-TTTGATGGTTATTTGTACGGA-------ATCACAAACTTT-CC 211 consensus_16767#0 ATAAGCAA-CTT-CAA-ACTGGAAGTGCATGCATTGTG-------ATTAAAAACTTTTTC 640 consensus_16767#2 GTTGTGATGATG-TTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCC 441 consensus_16767#3 GTTGTGATGATG-TTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCC 500 consensus_16767#5 GTTGTGATGATG-TTCGTTTGGTGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCC 429 consensus_16767#4 GCCGTTGGGATGGTTAGATTGGAAATGTTAGCTATGGAGATATGAGGAAATGTTTCTATT 350 * ** * * * consensus_16767#1 AGTTAATTTGAGCACA---------GCTGCTT--CGATA-------TATACTCT------ 593 consensus_16767#7 AGTTAATTTCNGCACA---------GCTGCTT--CGANA-------TCTACNCT------ 132 consensus_16767#6 GTTTATGTACATCCTA---------GCATCTT--CATAACA----CTCAACTGG------ 250 consensus_16767#0 AGTTAATTTGAGCACA---------GCTGCTT--CGATA-------TATACTCT------ 676 consensus_16767#2 AGTTTATTGTTACATTC----CTATGCATCTTATCATAAGCAACTTCAAACTGG------ 491 consensus_16767#3 AGTTTATTGTTACATTC----CTATGCATCTTATCATAAGCAACTTCAAACTGG------ 550 consensus_16767#5 AGTTTATTGTTACATTC----CTATGCATCTTATCATAAGCAACTTCAAACTGG------ 479 consensus_16767#4 CTTAAAATCTATCACGAGTGGTTGGGGATTTTTTTTTAATGCATTTCAATCACGGTGCAG 410 * * * * ** * * consensus_16767#1 ---AATGACA-GCTTTGTCG----G---TCGTTTAATGTATTT---CCCTGCCTTTC--- 636 consensus_16767#7 ---AATGACA-GCTTTGTCG----G---TCGCGTAATGTATTT---CCCTGCCGTTC--- 175 consensus_16767#6 ---AAGTGCATGCTGTGATA----AAACTTTCATAATTGAGCA---CACTGCTCGAT--- 297 consensus_16767#0 ---AATGACA-GCTTTGTCG----G---TCGTTTAATGTATTT---CCCTGCCTTTC--- 719 consensus_16767#2 ---AAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGA 548 consensus_16767#3 ---AAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCG- 606 consensus_16767#5 ---AAGTGCATGCATTGTGATTAAAAACTTTTTCAGTTAAAAAAAAAAAAAA-------- 528 consensus_16767#4 GAGAGGGATCTGGATTATTATAGGGAAAAAAGTGATACTAGCTTTTCANNAGTAAGTTTA 470 * * * * * consensus_16767#1 -TCA---TCTTATAGGCATAACATT--TG------------CATCTGCTTTGGTTTGATG 678 consensus_16767#7 -TCA---TCTTATAGGCATAACATT--TG------------CATCTGCTTTGTNTTGATG 217 consensus_16767#6 -ATA---TACTCTAATGACACCTTT--CG------------TCTTTAATGTATTCCCCCT 339 consensus_16767#0 -TCA---TCTTATAGGCATAACATT--TG------------CATCTGCTTTGTTTTGATG 761 consensus_16767#2 TATA---TACTCTAATGACAGCTTTGTCGGT----------CGGTTAATGTATTTCCCTG 595 consensus_16767#3 -ATA---AAAAAAAAAAAAAAN-------------------------------------- 624 consensus_16767#5 ------------------------------------------------------------ consensus_16767#4 ATTAGTTTTTCATAGAATTAAATTTGTTTCATAGGAAAAAACNNNTGATTNNNAATTTTT 530 consensus_16767#1 CAGCTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAATAAAAAATAAA 738 consensus_16767#7 CAGTTTGTATGNCATTAATCACGT------------------------------------ 241 consensus_16767#6 TCTCATCTATAGCATAACATTCATCTGCTTGTTTGA------------------------ 375 consensus_16767#0 CAGTTTGTATGTCATTAATCACGTGGTGATTTTGTGGCCTTTTCTTAAGCTTGCAAGA-- 819 consensus_16767#2 CCTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- 628 consensus_16767#3 ------------------------------------------------------------ consensus_16767#5 ------------------------------------------------------------ consensus_16767#4 TGTTTTTTAANNNNNNACTTTGANNNNNANTTTTTTTGGATCGTATGTTGCTCCATTNNN 590 consensus_16767#1 TTTTACAATAATAATTATAATTTT 762 consensus_16767#7 ------------------------ consensus_16767#6 ------------------------ consensus_16767#0 ------------------------ consensus_16767#2 ------------------------ consensus_16767#3 ------------------------ consensus_16767#5 ------------------------ consensus_16767#4 NNN--------------------- 593 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||