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Oryza sativa
cluster # 1681 cluster # 1681       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1681#0 length = 947 sequences # 2  

consensusID : consensus_1681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 947
fasta sequence
                              [CTTCCCCGACGCCGACTCCGCCGCCGCCGTCGCCGCGCCGCCTCGCCGCCATGCCCGCCGTCAAGTGGCTGATGCACTGGCACCCGAACCAGGGGGCGACGCTGAACAGCCAGATCCTGGCGGAGGCGTGCGCCTGCGCGGAGTCCCTGGGGGGATCCAAGGACGGGAGGTGGAAGACCTCCATCATCTTCTACCGCGCGATGGCGCGGGACGGCGCGTCCGCCGCCGCCGCGGGGGGCGGGGGCCCCCCGCAGCAGCACCCCGACGTGCCCCGGGAGCTCCTCGGCGTCGCGCTGCACGAGCGCCCGGGGCTCTACTTCTCCATCCTCCGCGCGCACCGGCTCGTCCTCCAGGCCGACTCCGCGTTTCCCCAGGTCATGGAGAAGCTCCAGTCCTACAAGGCCCGCGTCACCCTCAACTTCGAGGGATTTCAGTATCAACTGGGTGACTTTTGCCTGAGGATTGGAAAATGTGTTCCTAATAATTCGGAAACA-CTGAGGGGAATCATGATGGAGGTAGAGTATTATCCCCTATCTTCCATTGAAAAATCCAGGGCAGTAATGGAAGACTTCTTTGACATATGGCAGGAAACAGTTGCTA-AGAAGTCATTACCTGGTCATTTCATCCACGTAGAATCTAACTTTTCAGAGTATGGTCTTTCAGATCACTATTCTTTCCAGCACACTGCCGTTCAGTACGCAACTTGTTTGCAACAACTTATGGCTGCCGTGAGGCCCCAATGACATCCACAAGGTGTGTCTCATGCGGTGAAATGTTATTGGTCTTCAAGGA-CTGAGGTAGTGATAATTCTGAACAATTGAGTAGCTATGACCTGTATTATCACGAGTTCTTATTGTCAGTAGATCCTTAATTTTGTCGATGTGGACTAACTCACCAAACTAGGCATGGTAAGCAAATATTGCTACCCTAACAGCAATGGTGTGGCA]

[+] EMBL AK063205             [CTTCCCCGACGCCGACTCCGCCGCCGCCGTCGCCGCGCCGCCTCGCCGCCATGCCCGCCGTCAAGTGGCTGATGCACTGGCACCCGAACCAGGGGGCGACGCTGAACAGCCAGATCCTGGCGGAGGCGTGCGCCTGCGCGGAGTCCCTGGGGGGATCCAAGGACGGGAGGTGGAAGACCTCCATCATCTTCTACCGCGCGATGGCGCGGGACGGCGCGTCCGCCGCCGCCGCGGGGGGCGGGGGCCCCCCGCAGCAGCACCCCGACGTGCCCCGGGAGCTCCTCGGCGTCGCGCTGCACGAGCGCCCGGGGCTCTACTTCTCCATCCTCCGCGCGCACCGGCTCGTCCTCCAGGCCGACTCCGCGTTTCCCCAGGTCATGGAGAAGCTCCAGTCCTACAAGGCCCGCGTCACCCTCAACTTCGAGGGATTTCAGTATCAACTGGGTGACTTTTGCCTGAGGATTGGAAAATGTGTTCCTAATAATTCGGAAACA CTGAGGGGAATCATGATGGAGGTAGAGTATTATCCCCTATCTTCCATTGAAAAATCCAGGGCAGTAATGGAAGACTTCTTTGACATATGGCAGGAAACAGTTGCTA AGAAGTCATTACCTGGTCATTTCATCCACGTAGAATCTAACTTTTCAGAGTATGGTCTTTCAGATCACTATTCTTTCCAGCACACTGCCGTTCAGTACGCAACTTGTTTGCAACAACTTATGGCTGCCGTGAGGCCCCAATGACATCCACAAGGTGTGTCTCATGCGGTGAAATGTTATTGGTCTTCAAGGA CTGAGGTAGTGATAATTCTGAACAATTGAGTAGCTATGACCTGTATTATCACGAGTTCTTATTGTCAGTAGATCCTTAATTTTGTCGATGTGGACTAACTCACCAAACTAGGCATGGTAAGCAAATATTGCTACCCTAACAGCAATGGTGTGGCA]
[+] EMBL BM038727             [                                                                                                                                                                                                                                                                                                                                      CTCCGCGCGCACCGGCTCGTCCTCCA GCCGACTCCGCGTTTCCCCAGGTCATGGAGAAGCTCCAGTCCTACAA GCCCGCGTCACCCTCAACTTCGAGGGATTTCAGTATCAACT GGTGACTTTTGCCTGAGGATTGGAAAATGTGTTCCTAATAATTCGGAAACACCTGAGGGGAATCATGATGGAGGTAGAGTATTATCCCCTATCTTCCATTGAAAAATCCAGGGCAGTAATGGAAGACTTCTTTGACATATGGCAGGAAACNGTTGCTAGAGAAGTCATTACCTGGTCATTTCATCCACGTAGAATCTAACTTTTCAGAGTATGGTCTTTCAGATCACTATTCTTTCCAGCACACTGCCGTTCAGTACGCAACTTGTTTGCAACAACTTATGGCTGCCGTGAGGCCCC ATGACATCCACAAGGTGTGTCTCATGCGGTGAAATGTTATTGGTCTTCAAGGACCTGAGGTAGTGATAATTCTGAACAAaaa                                                                                                                               ]


>consensus_1681#0 CTTCCCCGACGCCGACTCCGCCGCCGCCGTCGCCGCGCCGCCTCGCCGCCATGCCCGCCG TCAAGTGGCTGATGCACTGGCACCCGAACCAGGGGGCGACGCTGAACAGCCAGATCCTGG CGGAGGCGTGCGCCTGCGCGGAGTCCCTGGGGGGATCCAAGGACGGGAGGTGGAAGACCT CCATCATCTTCTACCGCGCGATGGCGCGGGACGGCGCGTCCGCCGCCGCCGCGGGGGGCG GGGGCCCCCCGCAGCAGCACCCCGACGTGCCCCGGGAGCTCCTCGGCGTCGCGCTGCACG AGCGCCCGGGGCTCTACTTCTCCATCCTCCGCGCGCACCGGCTCGTCCTCCAGGCCGACT CCGCGTTTCCCCAGGTCATGGAGAAGCTCCAGTCCTACAAGGCCCGCGTCACCCTCAACT TCGAGGGATTTCAGTATCAACTGGGTGACTTTTGCCTGAGGATTGGAAAATGTGTTCCTA ATAATTCGGAAACACTGAGGGGAATCATGATGGAGGTAGAGTATTATCCCCTATCTTCCA TTGAAAAATCCAGGGCAGTAATGGAAGACTTCTTTGACATATGGCAGGAAACAGTTGCTA AGAAGTCATTACCTGGTCATTTCATCCACGTAGAATCTAACTTTTCAGAGTATGGTCTTT CAGATCACTATTCTTTCCAGCACACTGCCGTTCAGTACGCAACTTGTTTGCAACAACTTA TGGCTGCCGTGAGGCCCCAATGACATCCACAAGGTGTGTCTCATGCGGTGAAATGTTATT GGTCTTCAAGGACTGAGGTAGTGATAATTCTGAACAATTGAGTAGCTATGACCTGTATTA TCACGAGTTCTTATTGTCAGTAGATCCTTAATTTTGTCGATGTGGACTAACTCACCAAAC TAGGCATGGTAAGCAAATATTGCTACCCTAACAGCAATGGTGTGGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)