cluster # 1682

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Oryza sativa
cluster # 1682 cluster # 1682 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1682#0 length = 703 sequences # 2

consensusID : consensus_1682#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 703
fasta sequence

                              [GATTTATAAAGGGATAAAACAGGATTCACATTTTACTGGGGAGTTGGAAGTTTGCCACCCTGTTGCTTCTCACTCCTCGAACATGAATCAGACAGCTGTAAAAGATTCTGAACAAAAAATTACAACATTGATAAATAAGCAGCTTAAGGTTTACAGACTAAAGAAACTTAAGGTCATCCTCTTGCTGCTCCAGGACAATTGTTGCGAGTGCTCGTCGGTATGCCGCTGATCTTGCATTCCTTACAAGGACACAGATGTCTTTGCGCTTCAGACTTTCATGTGTCCTCCATTGCTGCCGCCTCAACACCGCGAGAAGCTTTGCTTCGCAGAAGGCAACTGCAACAGCATCTTGCCCACTACTTCCATGGACAAAACCAGTCGTGATGAAGCCTATCGGCCATCTGAATGCCTTTCGTGTAGAATCGCCGTTTGGCAGCTGGAGATTGCTGGTGCTAGGATCCAGCCAAGAGAAATAAGAACTTACATGGGATTGAGGGAGCTGGAGTTCCCATTTTTCTAGACATTCTTCTTCCTCCTCTTC-TGATC-TGGTCTTCCGGTTCCA-GGC-TGAAAGATCTGAT-GGGAGTGGGGCACAAACAACAGCACCCTCTTCAAAAGAACCTTCCTTAAATGCTCTAATCAGCACCCTTACAAGACATAATCTGTTTATAGAGCATCCCGTTTTCACATTATCACCAGAAACTAG]

[+] EMBL CB635537             [GATTTATAAAGGGATAAAACAGGATTCACATTTTACTGGGGAGTTGGAAGTTTGCCACCCTGTTGCTTCTCACTCCTCGAACATGAATCAGACAGCTGTAAAAGATTCTGAACAAAAAATTACAACATTGATAAATAAGCAGCTTAAGGTTTACAGACTAAAGAAACTTAAGGTCATCCTCTTGCTGCTCCAGGACAATTGTTGCGAGTGCTCGTCGGTATGCCGCTGATCTTGCATTCCTTACAAGGACACAGATGTCTTTGCGCTTCAGACTTTCATGTGTCCTCCATTGCTGCCGCCTCAACACCGCGAGAAGCTTTGCTTCGCAGAAGGCAACTGCAACAGCATCTTGCCCACTACTTCCATGGACAAAACCAGTCGTGATGAAGCCTATCGGCCATCTGAATGCCTTTCGTGTAGAATCGCCGTTTGGCAGCTGGAGATTGCTGGTGCTAGGATCCAGCCAAGAGAAATAAGAACTTACATGGGATTGAGGGAGCTGGAGTTCCCATTTTTCTAGACATTCTTCTTCCTCCTCTTC TGATC TGGTCTTCCGGTTCCA GGC TGAAAGATCTGAT GGGAGTGGGGCACAAACAACAGCACCCTCTTCAAAAGAACCTTCCTTAAATGCTCTAATCAGCACCCTTACAAGACATAATCTGTTTATAGAGCATCCCGTTTTCACATTATCACCAGAAACTAG]
[-] EMBL BM038681             [ttTTTTTGAAGGGATAAAAAAGGATTCACATTTTACTGGGGAG TGGAAG TTGCCACCCTG TGCTTCTCACTCCTCGAACATGAATCAGACAGCTGTAAAAGATTCTGAACAAAAAATTACAACA TGATAACTAAGCAGCTTAAGGTTTACAGACTAGAGAAACTTAAGGTCATCCTCTTGCTGCTCCAGGACAA TGTTGCGAGTGCTCGTCGGTATGCCGCTGATCTTGCATTCCTTACAAGGACACAGATGTC TTGCGCTTCAGACTTTCATGTGTCCTCCATTGCTGCCGCCTCAACACCGCGAGAAGCTTTGCTTCGCAGAAGGCAACTGCAACAGCATCTTGCCCACTACTTCCATGGACAAAACCCGTCGTGACGAAGCCTATCGGCCATCTGAATGCCTTTCGTGTAGAATCGCCGTTTGGCAGCTGGAGATTGCTGGTGCTAGGATCCAGCCAAGAGAAATAAGAACTTACATGGGATTGAGGGAGCTGGAGTTCCCATTTTTCTAGA ATTCTTCTTCCTCCTCTTCGTGATCGTGGTCTTACGGTTTCAGGGCGTGAAAGATCTGATGGGGAGTGGGGCACAAACA  AGGA CCTCTTCAAAANAA CTTCCTTAAATGGTCTAATNAGGACCCTTAC                                                      ]




>consensus_1682#0
GATTTATAAAGGGATAAAACAGGATTCACATTTTACTGGGGAGTTGGAAGTTTGCCACCC
TGTTGCTTCTCACTCCTCGAACATGAATCAGACAGCTGTAAAAGATTCTGAACAAAAAAT
TACAACATTGATAAATAAGCAGCTTAAGGTTTACAGACTAAAGAAACTTAAGGTCATCCT
CTTGCTGCTCCAGGACAATTGTTGCGAGTGCTCGTCGGTATGCCGCTGATCTTGCATTCC
TTACAAGGACACAGATGTCTTTGCGCTTCAGACTTTCATGTGTCCTCCATTGCTGCCGCC
TCAACACCGCGAGAAGCTTTGCTTCGCAGAAGGCAACTGCAACAGCATCTTGCCCACTAC
TTCCATGGACAAAACCAGTCGTGATGAAGCCTATCGGCCATCTGAATGCCTTTCGTGTAG
AATCGCCGTTTGGCAGCTGGAGATTGCTGGTGCTAGGATCCAGCCAAGAGAAATAAGAAC
TTACATGGGATTGAGGGAGCTGGAGTTCCCATTTTTCTAGACATTCTTCTTCCTCCTCTT
CTGATCTGGTCTTCCGGTTCCAGGCTGAAAGATCTGATGGGAGTGGGGCACAAACAACAG
CACCCTCTTCAAAAGAACCTTCCTTAAATGCTCTAATCAGCACCCTTACAAGACATAATC
TGTTTATAGAGCATCCCGTTTTCACATTATCACCAGAAACTAG

clustalw multiple alignements is not computed in this case