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Oryza sativa
cluster # 16826 cluster # 16826       Sequences # 43       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_16826#0 length = 587 sequences # 5  
consensus_16826#1 length = 565 sequences # 23  
consensus_16826#2 length = 531 sequences # 11  
consensus_16826#3 length = 510 sequences # 1  
consensus_16826#4 length = 491 sequences # 1  
consensus_16826#5 length = 432 sequences # 1  
consensus_16826#6 length = 173 sequences # 1  

consensusID : consensus_16826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 587
fasta sequence
                              [CTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAAAAAAAAAAATGTGATTTGCTAATTTGCTGTATGGATAATGGGCTGTGTTTTTGAAAAAAAAGGGTGGGCTTTTGATTTCCAAAAA]

[+] EMBL AU160966             [CTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAAAAAAAAAAAAAA                                                                            ]
[+] EMBL AU101331             [                                                                  GATGATCATCCCGGTGCGGTGCTTCACTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGNCCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAATTTTCTTATTGTGATTTGCTAATTTGCTGTATGGATAATGGGCTGTGTTTTTGAAAAAAAAGGGTGGGCTTTTGATTTCCAAAAA]
[-] EMBL CF330864             [                                                                                                                                                                                         GGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGCCCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTACCCGTTCCCGTGATGTCAGACGATGGAAGTGATATAACTAGTGGGCAGAGTCCCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAAAAAAAAAAAAAAaaaaaaa                                                                     ]
[+] EMBL AU031661             [                                                                                                                                                                                                                                                                                                ccgCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAAAAA                                                                                  ]
[+] EMBL OSR03671A            [                                                                                                                                                                                                                                                                                                ccgnCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAAAAA                                                                                  ]


>consensus_16826#0 CTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGC ATCGGAGATGATCATCCCGGTGCGGTGCTTCACTGCGGGAAGGTGATTGGGAACAAGTGG GATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTG GGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAG TTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGC TCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATG ATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATAT AACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAA GGGGGGTATGTTCCTGCAGTAAAAAAAAAAATGTGATTTGCTAATTTGCTGTATGGATAA TGGGCTGTGTTTTTGAAAAAAAAGGGTGGGCTTTTGATTTCCAAAAA



consensusID : consensus_16826#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 565
fasta sequence
                              [CCACTGGGCCGAGGACCTGACTGGACTGAAGGAGTAGAAA--C-TTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ACG-ATGGAAG-----TGATATAACTAGTGGGCAGAGTACCTCTGGTT-GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA-TGTTCCTGCAGTAAAAAAAAA]

[+] EMBL CF338402             [CCACTGGGCCGAGGACCTGACTGGACTGAAGGAGTAGAAACCC TTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA TGTTCCTGCAGTAA       ]
[+] EMBL CF281216             [                   cCTGGACTGAAGGAGTAGAAA  C TTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATCGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGAACG ATGGAAG     TGATATAACTAGTGGGCAGAGTAaaaaaa                                                                     ]
[-] EMBL CF281217             [                    CTGGACTGAAGGAGTAGAAA  C TTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCG                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF322394             [                               GAGTAGAAA  CTTTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTTCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAAaaaaaa                                                                                    ]
[+] EMBL CF339489             [                               GAGTAGAAA        GAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTCACTCAACTACAACACGCTGGAGAAGACCGATACAGCAGGTTAAGTTGAC                                                                                                                                                                                                                                    ]
[+] EMBL CF340484             [                                          C TTTCGAAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCA                                              ]
[+] EMBL CF282464             [                                                 AATCGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTAGATTT                                                ]
[+] EMBL CF338999             [                                                 AAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA TGTTCCTGCAGTAA       ]
[+] EMBL CF338295             [                                                 AAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTTGGTGTGTGAACTTGTTTTCAA                                             ]
[+] EMBL CF338721             [                                                 AAACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA TGTTCCTGCAGTAA       ]
[+] EMBL CF315360             [                                                   ACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCT GATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACGAATGGAAG     TGATATAACTAGTGGGCAGAGT CCTCTGGTT GTGTGTGAACTTGTTTTCAAaaaa                                         ]
[-] EMBL CF322393             [                                                   ACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAAaaaaaaa                                                                                   ]
[+] EMBL CF328623             [                                                   ACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAATACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATCGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA TGTTCCTGCAGTAAAA     ]
[+] EMBL CF313441             [                                                   ACGCTCAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGTA TGTTCCTGCAGTAAAAAAAA ]
[+] EMBL CF330865             [                                                        CAAAAACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACCGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGGT                       ]
[+] EMBL CF279664             [                                                             ACCCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGTCTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTTC TTATTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCA                                              ]
[-] EMBL CF318454             [                                                                                                CTCCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTAaaaaaaa                              ]
[-] EMBL CF328622             [                                                                                                            CGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAATACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATCGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAA GGGGGGTA TGTTCCTGCAGTAAAAA    ]
[-] EMBL CF279663             [                                                                                                            CGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAA GGGGGGTA TGTTCCTGCA  AAAAAA   ]
[-] EMBL CF315361             [                                                                                                            CGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCT GATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAaaaaa                                        ]
[-] EMBL CF313442             [                                                                                                            CGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTAATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAA GGGGGGTA TGTTCCTGCAGTAAAAAAAAA]
[+] EMBL CF318455             [                                                                                                             GGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTAaaaaaa                               ]
[+] EMBL CF196041             [                                                                                                                                                                                                                                                                                                                       ACACGCTGGAGAAGACCGAGACTGCAGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG ACG ATGGAAGTGATATGATATAACTATTGGGCAGAGTACCTCTGGTT GTGTGTGAACTTGTTTTCAAGACTTTTATATCAA   GGGGTATTGTTCCTGCAGTAAAAAAAA ]


>consensus_16826#1 CCACTGGGCCGAGGACCTGACTGGACTGAAGGAGTAGAAACTTTCGAAACGCTCAAAAAC CCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGGGAGCGCATCGGA GATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCT GTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTT GGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACT CAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAG AACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCA TGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGACGATGGAAGTGATATAACTA GTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGG GGTATGTTCCTGCAGTAAAAAAAAA



consensusID : consensus_16826#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 531
fasta sequence
                              [GAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG-TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG-AAGACCGAGACAGCAGGTTAAG-TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT-ATT-G-CC-TTTGTTCACGAATG-TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT-ATGTAACTGTTACCGTGATGTCAGATGATGGAAG-----TGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAATTTTCTTATT]

[+] EMBL AK062318             [GAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAGATGATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAATTTTCTTATT]
[+] EMBL AK103639             [  AACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAGATGATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAG             ]
[+] EMBL OSC24452             [         AAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGNGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAGTTTGACCCAGCATGCTNCAG ANTCTTGTTCCTT                                                                                                                                                                                                            ]
[+] EMBL AU070146             [              CCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTTAATT G CCTTTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTAATGTAACTGTTACCGGAATGTCAGATGATGGAAG     TG                                                                                                ]
[+] EMBL OSC813               [              CCCTCTCCNACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGAAACAAGTGGGATCTGTACCTGGNTCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCNAATGCTCATNACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATTNGNCT TTTGTTCACGGATGTTTCCAAGGAATTTtttggta                                                                                                                                                               ]
[+] EMBL AU069030             [                  CTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAG                                                                                                                 ]
[+] EMBL AU160965             [                  CTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAA                                                                                                                                            ]
[+] EMBL AU069626             [                   TCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTC                                                                                                                   ]
[+] EMBL AU182122             [                   TCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACAGCAGGTTAAG TTGACCCAGCATGCTCCAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAGATGATGGAAG     TGTTATAACTAGTGGGCAG                                                                               ]
[+] EMBL BE607452             [                               CTCCTCCCACTCTTCTC   CGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACG TTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAG AAGACCGAGACTGCAGGTTAAG TTGACCCTGCATGCTCTAGAACTCTTGTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAGACGATGGAAGTGATATGATATAACTATTGGGC                                                                                 ]
[+] EMBL D42695               [                                                                                                                                                                                                                                                                                                                       ACCCAGCATGCTCCAGAACTCTNNTTCCTT ATT G CC TTTGTTCACGAATG TTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACT ATGTAACTGTTACCGTGATGTCAGACGATGGAAG     TGATATAACTAGTGGGCAGAGTACCTCTNNTTGTGTGTG ACTTGTTTTCAAGACTTTTATATCAAGGNGGGTATG                      ]


>consensus_16826#2 GAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGG CGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAA GGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGG GGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCA TGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGG TTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTT CCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGT CAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTT TTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAATTTTCTTATT



consensusID : consensus_16826#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence
                              [GAGTAGAAACCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCTGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAAAAAAAAAAAAAAAAAACACT]

[+] EMBL CF291592             [GAGTAGAAACCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCTGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAAAAAAAAAAAAAAAAAACACT]


>consensus_16826#3 GAGTAGAAACCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCT TCTCCGGCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGT GCTTCACCTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGG CTGACTACACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCTGTTACTGCTGCCGGC GAATGCTCATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGA AGACCGAGACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCC TTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTA ACTGTTACCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGT TGTGTGTGAAAAAAAAAAAAAAAAAACACT



consensusID : consensus_16826#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 491
fasta sequence
                              [ATCCCTTCTCCCTCCACTCTTCTNCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAATGATCATCCCGGTGCGGTGCTTCACCTGCGNGAAGGTGATTGGGAACACGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGAGGGATGCTCTGGATGCATTAGAGTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACTGCAGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTNGTTCCTTATTGCCTATGTTCACGAATGTTCCAAGGANATTGTGTGATGATCCATGCTGCATCTCAACTATGTAACTGGTACCGTGATGTCAGACGATGGAAGTGATATGATATAACTATTGTGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTGTCAGACTCTATATCAAGAGTATGGCNTCTGCA]

[+] EMBL BE040260             [ATCCCTTCTCCCTCCACTCTTCTNCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAATGATCATCCCGGTGCGGTGCTTCACCTGCGNGAAGGTGATTGGGAACACGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGAGGGATGCTCTGGATGCATTAGAGTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACTGCAGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTNGTTCCTTATTGCCTATGTTCACGAATGTTCCAAGGANATTGTGTGATGATCCATGCTGCATCTCAACTATGTAACTGGTACCGTGATGTCAGACGATGGAAGTGATATGATATAACTATTGTGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTGTCAGACTCTATATCAAGAGTATGGCNTCTGCA]


>consensus_16826#4 ATCCCTTCTCCCTCCACTCTTCTNCGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAATG ATCATCCCGGTGCGGTGCTTCACCTGCGNGAAGGTGATTGGGAACACGTGGGATCTGTAC CTGGATCTCCTCCAGGCTGACTACACAGAGAGGGATGCTCTGGATGCATTAGAGTTGGTC CGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCATCGAGAAGTTACTCAAC TACAACACGCTGGAGAAGACCGAGACTGCAGGTTAAGTTGACCCTGCATGCTCTAGAACT CTTNGTTCCTTATTGCCTATGTTCACGAATGTTCCAAGGANATTGTGTGATGATCCATGC TGCATCTCAACTATGTAACTGGTACCGTGATGTCAGACGATGGAAGTGATATGATATAAC TATTGTGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTGTCAGACTCTATATCAAGAGTA TGGCNTCTGCA



consensusID : consensus_16826#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 432
fasta sequence
                              [CTTTTTTCCGGCGGCGGAGGGAGTGCATCGGAGATGATCATTCCGGTGCGGTGATTTACCTGGGGGAAGGTGATTGGGGACAAGTGGGATCTGTACGTGGATTTCCTCCAGGGTGAATACTCAGAGGGGGATGGTTTGGATGCATTGGGTTTGGTCCGTTACTGTCGCCGGCGAATGGTCATTACCCATGTTGACCTTATCGAGAAGTTAGTTAAATACGACACGGTGGAGAAGGCCGAGTCAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCCTATAGCCTTTGTTCAAGAATGTTCCAAGGAATTTGTGTCATGATCCATGATGCATTTCAACTATGTAACTGTTACCGGGAAGTCAATACGATGTAAAGTGAAATGAATAGTGGGCAGAGTACCTCTGGTTGTGTGGAAAAAAAAAAA]

[-] EMBL CF282463             [CTTTTTTCCGGCGGCGGAGGGAGTGCATCGGAGATGATCATTCCGGTGCGGTGATTTACCTGGGGGAAGGTGATTGGGGACAAGTGGGATCTGTACGTGGATTTCCTCCAGGGTGAATACTCAGAGGGGGATGGTTTGGATGCATTGGGTTTGGTCCGTTACTGTCGCCGGCGAATGGTCATTACCCATGTTGACCTTATCGAGAAGTTAGTTAAATACGACACGGTGGAGAAGGCCGAGTCAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCCTATAGCCTTTGTTCAAGAATGTTCCAAGGAATTTGTGTCATGATCCATGATGCATTTCAACTATGTAACTGTTACCGGGAAGTCAATACGATGTAAAGTGAAATGAATAGTGGGCAGAGTACCTCTGGTTGTGTGGAAAAAAAAAAA]


>consensus_16826#5 CTTTTTTCCGGCGGCGGAGGGAGTGCATCGGAGATGATCATTCCGGTGCGGTGATTTACC TGGGGGAAGGTGATTGGGGACAAGTGGGATCTGTACGTGGATTTCCTCCAGGGTGAATAC TCAGAGGGGGATGGTTTGGATGCATTGGGTTTGGTCCGTTACTGTCGCCGGCGAATGGTC ATTACCCATGTTGACCTTATCGAGAAGTTAGTTAAATACGACACGGTGGAGAAGGCCGAG TCAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCCTATAGCCTTTGTTCA AGAATGTTCCAAGGAATTTGTGTCATGATCCATGATGCATTTCAACTATGTAACTGTTAC CGGGAAGTCAATACGATGTAAAGTGAAATGAATAGTGGGCAGAGTACCTCTGGTTGTGTG GAAAAAAAAAAA



consensusID : consensus_16826#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 173
fasta sequence
                              [AGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGACGATGGAAGTGATATGATATAACTATTGGGCAAAAAAAAAAAAAAA]

[+] EMBL BQ529302             [AGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAGACGATGGAAGTGATATGATATAACTATTGGGCAAAAAAAAAAAAAAA]


>consensus_16826#6 AGGTTAAGTTGACCCTGCATGCTCTAGAACTCTTGTTCCTTATTGCCTTTGTTCACGAAT GTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGA TGTCAGACGATGGAAGTGATATGATATAACTATTGGGCAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_16826#3      -----------------------------GAGTAGAAACCCTTTCGAAACGCGCAAAAAC 31
consensus_16826#5      ------------------------------------------------------------
consensus_16826#1      CCACTGGGCCGAGGACCTGACTGGACTGAAGGAGTAGAAACTTTCGAAACGCTCAAAAAC 60
consensus_16826#2      ---------------------------------------------GAAACGCGCAAAAAC 15
consensus_16826#0      ------------------------------------------------------------
consensus_16826#4      ------------------------------------------------------------
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      CCTCTCCGACTCTCCCCTTCTCC---CACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGG 88
consensus_16826#5      ----------------------------CTTTTTTCCGGCGGCGGAGG------------ 20
consensus_16826#1      CCTCTCCGACTCTCCCCTTCTCCTCCCACTCTTCTCCGGCGGCGGCGG------------ 108
consensus_16826#2      CCTCTCCGACTCTCCCCTTCTCC---CACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGG 72
consensus_16826#0      ---CTCCGACTCTCCCCTTCTCC---CACTCTTCTCCGGCGGCGGCGGCGGCGGCGGCGG 54
consensus_16826#4      ------------ATCCCTTCTCCCTCCACTCTTCTNCGGCGGCGGCGGCGGCGGCGG--- 45
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      GAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAA 148
consensus_16826#5      GAGTGCATCGGAGATGATCATTCCGGTGCGGTGATTTACCTGGGGGAAGGTGATTGGGGA 80
consensus_16826#1      GAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAA 168
consensus_16826#2      GAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACCTGCGGGAAGGTGATTGGGAA 132
consensus_16826#0      GAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCAC-TGCGGGAAGGTGATTGGGAA 113
consensus_16826#4      GAGCGCATCGGA-ATGATCATCCCGGTGCGGTGCTTCACCTGCGNGAAGGTGATTGGGAA 104
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      CAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGA 208
consensus_16826#5      CAAGTGGGATCTGTACGTGGATTTCCTCCAGGGTGAATACTCAGAGGGGGATGGTTTGGA 140
consensus_16826#1      CAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGA 228
consensus_16826#2      CAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGA 192
consensus_16826#0      CAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGGGGGATGCTCTGGA 173
consensus_16826#4      CACGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTACACAGAGAGGGATGCTCTGGA 164
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      TGCATTGGGTTTGGTCTGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCAT 268
consensus_16826#5      TGCATTGGGTTTGGTCCGTTACTGTCGCCGGCGAATGGTCATTACCCATGTTGACCTTAT 200
consensus_16826#1      TGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCAT 288
consensus_16826#2      TGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCAT 252
consensus_16826#0      TGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCATGTTGACCTCAT 233
consensus_16826#4      TGCATTAGAGTTGGTCCGTTACTGCTGCCGGCGAATGCTCATGACCCACGTTGACCTCAT 224
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      CGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCC 328
consensus_16826#5      CGAGAAGTTAGTTAAATACGACACGGTGGAGAAGGCCGAGTCAGCAGGTTAAGTTGACCC 260
consensus_16826#1      CGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCC 348
consensus_16826#2      CGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCC 312
consensus_16826#0      CGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACAGCAGGTTAAGTTGACCC 293
consensus_16826#4      CGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAGACTGCAGGTTAAGTTGACCC 284
consensus_16826#6      ---------------------------------------------AGGTTAAGTTGACCC 15
                                                                    ***************

consensus_16826#3      AGCATGCTCCAGAACTCTTG-TTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTT 387
consensus_16826#5      AGCATGCTCCAGAACTCTTG-TTCCCTATAGCCTTTGTTCAAGAATGTTCCAAGGAATTT 319
consensus_16826#1      AGCATGCTCCAGAACTCTTG-TTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTT 407
consensus_16826#2      AGCATGCTCCAGAACTCTTG-TTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTT 371
consensus_16826#0      AGCATGCTCCAGAACTCTTG-TTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTT 352
consensus_16826#4      TGCATGCTCTAGAACTCTTNGTTCCTTATTGCCTATGTTCACGAATGTTCCAAGGANATT 344
consensus_16826#6      TGCATGCTCTAGAACTCTTG-TTCCTTATTGCCTTTGTTCACGAATGTTCCAAGGAATTT 74
                        ******** *********  **** *** **** ****** **************  **

consensus_16826#3      GTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ATGATG- 445
consensus_16826#5      GTGTCATGATCCATGATGCATTTCAACTATGTAACTGTTACCGGGAAGTCAATACGATGT 379
consensus_16826#1      GTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ACGATG- 465
consensus_16826#2      GTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ATGATG- 429
consensus_16826#0      GTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ATGATG- 410
consensus_16826#4      GTGTGATGATCCATGCTGCATCTCAACTATGTAACTGGTACCGTGATGTCAG-ACGATGG 403
consensus_16826#6      GTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTACCGTGATGTCAG-ACGATGG 133
                       **** ********** ***** *************** ***** ** ****  * **** 

consensus_16826#3      ----GAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAAAAAAAAAAAAA 501
consensus_16826#5      ----AAAGTGAAATGAATAGTGGGCAGAGTACCTCTGGTTGTGTGGAAAAAAAAAAA--- 432
consensus_16826#1      ----GAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAA 521
consensus_16826#2      ----GAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAA 485
consensus_16826#0      ----GAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTTTCAA 466
consensus_16826#4      AAGTGATATGATATAACTATTGTGCAGAGTACCTCTGGTTGTGTGTGAACTTGTTGTCAG 463
consensus_16826#6      AAGTGATATGATATAACTATTGGGCAAAAAAAAAAAAAAA-------------------- 173
                            *  *** ** * ** ** *** *  *                             

consensus_16826#3      AAAAACACT--------------------------------------------------- 510
consensus_16826#5      ------------------------------------------------------------
consensus_16826#1      GACTTTTATATCAAGGGGGGGTATGTTCCTGCAGTAAAAAAAAA---------------- 565
consensus_16826#2      GACTTTTATATCAAGGGGGG-TATGTTCCTGCAGTAATTTTCTTATT------------- 531
consensus_16826#0      GACTTTTATATCAAGGGGGG-TATGTTCCTGCAGTAAAAAAAAAAATGTGATTTGCTAAT 525
consensus_16826#4      ACTCTATATCAAGAGTATGGCNTCTGCA-------------------------------- 491
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      ------------------------------------------------------------
consensus_16826#5      ------------------------------------------------------------
consensus_16826#1      ------------------------------------------------------------
consensus_16826#2      ------------------------------------------------------------
consensus_16826#0      TTGCTGTATGGATAATGGGCTGTGTTTTTGAAAAAAAAGGGTGGGCTTTTGATTTCCAAA 585
consensus_16826#4      ------------------------------------------------------------
consensus_16826#6      ------------------------------------------------------------
                                                                                   

consensus_16826#3      --
consensus_16826#5      --
consensus_16826#1      --
consensus_16826#2      --
consensus_16826#0      AA 587
consensus_16826#4      --
consensus_16826#6      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)