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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 38 consensus length = 738 fasta sequence
[CCTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC-GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA-TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC-GGAGAGGCTGGGGG-AGGAAGGGCT-GATGCAG-GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC-GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC-T-T-CGAC-GGCGACGGCGCCCTCA-GCGAGATGGAGTTCTGCG-TCCT-CATGGTCAGGCTCAGCCCCGAC-CTC-ATGGACG-AGCCTCGC-C-GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA---TTCTTC----TTTTTTCTTTCTTTCTTCTTTCTTC-TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC-TACACTCTGCTTGTTTCTTCGTTCCAAG-TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTCTTCGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATANNTTNNNNAAAAAAAAAAAAA]
[+] EMBL AK111852 [CCTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCT ]
[+] EMBL CF334420 [CCTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGA GGC AC TNTNCGACGGGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTNTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC ]
[+] EMBL AK111897 [CCTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTA ]
[+] EMBL AK112082 [ CTCTTCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCT ]
[-] EMBL BI305260 [ctTCTCCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL BI305240 [ctTCTCCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL BI305291 [ctTCTCCTCCTCCTCTCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL BI306652 [ TCAAAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCT ]
[+] EMBL AU094252 [ AAGATCGCAAGAAGCAACCAAGACCNCACCAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGNCGGAGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTCTTCGTTTAAAAA ]
[-] EMBL BU673289 [ AAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATCGGATCAGTCAACCTCACTCATTCTCATGGCGCCGGGCCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGNC GGAGAGNCTGGGGG AGGAAGGGCT GATGCTG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTCT ]
[+] EMBL AU064094 [ AAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGC GGANAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATNACCTTCGACAGCCTCCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATNNTCGCCGAGGGCGAC T T CNAC GGCGACGGCGGCCTCA GGNAGATGGAGTT TTCN TCCT CATGGTCAAGCTCAG CCCGAC CTC ATGGACG AGCCTTGC C GGTGGNTTGACGACGGCGTTG CCAGGCC ]
[+] EMBL AU064552 [ AAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAG AGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTTCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGT ]
[+] EMBL AU064089 [ AAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGC GGANAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATTCTCGCCGAGGGCGAC T T CGAC GGCGACGG GGCCTTA ACGAGATTGAGTT TTCGTTCCN AAT GTCAAG TTAG CCCGA CTT ATGG CG A ]
[+] EMBL AU065048 [ AAGATCGCAAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGAG AGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTT T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTNCG TCCT CATGGTCAGGCTCAG CCCGAC CTC AT ]
[-] EMBL BI305250 [ AGATCGCAAGAAGCACACAAGAACTCAGCAAATCGATC GATCAGTCATCCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGCCGACGACCTCCGGGGTATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[+] EMBL AA751955 [ GCANG AGCAAACAAGANCACNACAAATCNATC GATCAGTCAACCTCACTCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC NGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG ANCCTCGC C GGTGGCTCGACGACGCCGTCGCCCANGCCTCACAGTTCCTCTTTCA ]
[+] EMBL OS0795A [ AAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGC GGANAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTNCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTTCGGGGGATGCTCGCCGAGGGCGACTT T CGAC GGCGACGNCGNCCTCA GCGAGATGGAGTTCTGCG TCCT ]
[+] EMBL AU063403 [ AAGAAGCAAACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGC GGACAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACG GCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCGTTCCT CATGGTCAGGCTCAGCCCCGAC CTCAATGGACG AGCCTNGC C GGTGGCTTGACGACGCCGTTGCCCAGGCCTTAAAGTTCCTCTT ]
[+] EMBL OS1321919 [ ACAAGAACACAACAAATCGATC GATCAGTCAACCTCACTCATTCTCATGGCGGC GGANAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGNCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGNCTCCGCCGCAACG GCCTGCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATNNTCGCCGAGGGn ]
[-] EMBL CB967098 [ CTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[+] EMBL CB964437 [ TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAA ]
[+] EMBL CB965118 [ TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGGGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CTTGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATACCAATCGCATTTGTACTCTCATGTACATACACTCTGATTGTAAATACGAAACAAGATGGAAACTGGAAT ]
[+] EMBL CB965509 [ TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAA ]
[+] EMBL CB965412 [ TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAA ]
[+] EMBL BU673003 [ TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGG AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAA ]
[+] EMBL CB964862 [ TGGCGGC GGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGCTGGAGAGGCTGGGGGAAGGAAGGGCTAGATGC ]
[-] EMBL CB966867 [ GGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGG GGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL BU673814 [ GGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGG GGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTCNTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL BU673759 [ GGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGNC GGAGAGGCTGGG GGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL CB967110 [ GGCGGGGCAGAGACAGCAGCAGCAGATGA TGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGG GGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL CB965391 [ gccttCGGTTCATAGACATCATCACCAGATGATTGCAGGATGGGTTCGAGGACTACCTGCCGGTGATGTC GGAGAGTCTGGGGG AGTAAGGTCT GATGCAG GAGCTCGCAAGCGGTTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACACCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGCCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTC GCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTA TGATCAGCAAGCTT ]
[+] EMBL AU094267 [ gnCAGCAGCAGCAGATGA TGCAGAAGGGGTTCGAGGACTACCTGCCGGTGATGGC GGAGAGGCTGGGGN AGGAAGGGCT GATGCAG GAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCC GCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTCTTCGTTTAAAAA ]
[-] EMBL CB964950 [ GGCT GATTCAGTGAGCTCGCAATCGGGTTCCTCCTGCTCTTGTACCCTGCCTCCGGGCTCATCACCTTCGTCAGCCTCCTCCGCAACGCGCC GCTGCTCGGCCTCGTCGGGATGTCCGACTACGACCTCCGGGGGATGCTCGCCGAGGTCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[-] EMBL CB965367 [ gtTGTTCATGGTCCCGTCCTCCGGGCTCGTCTCGTTCGACAGCGTGCGCCGCTACGCGCC GCTGGTCGGCCTCGTCGGGATGTCCGACGGCGACCTCCGGGGGATGCTCGCCGAGGGCGAC T T CGAC GGCGACGGCGCCCTCA GCGAGATGGAGTTCTGCG TCCT CATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[+] EMBL AU102066 [ cgaAC T T CGAC GGCGACGGNGCCCTCAGGCGAGATGGAGTTCTGCG TCCTNCATGGTCAGGCTCAGCCCCGAC CTC ATGGACG AGCCTCGC C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTCTTCGTTTCACAAAAAAAA ]
[+] EMBL BE228713 [ nGGCTCANCCCCGACTCTT TGGGACGAAGCCTCGC CGGGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTACAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTNCTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTTC ]
[-] EMBL CB967479 [ TCGCNC GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGA TTCTTC TTTTTTCTTTCTTTCTTCTTTCTTC TCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTAC TACACTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCAGCAAGCTT ]
[+] EMBL AU093188 [ C C GGTGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGN TTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTC NCGTTGTTCATAGCATCAGGNTTCNTCAAGGGCACTGCTCATTGGTTCNCGGNTTCCAATCGCATTTGTACTCTCATGTNC TACNCTCTGCTTGTTTCTTCGTTCCAAG TGGAAACTGGAATCTGAATTAATTGATCNGCAAGCTTCTTCGTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATANNTTNNNNAAAAAAAAAAAAA]
consensusID : consensus_16919#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[CCGAACGCTTGTCGACGCGTGGGTCGTCTCTCCTCCTTTCAAGTTGCCAGTAACCATACAGACCCCTACATCGGTCGATCAGTCAACCTCACTGCATTCTCATGGTCGTCGGAGGCAGAGACAGCACCACCAGATGAGTGCAGGANGGGGNTTCGATGGANTACCTGCCGGTGATGGCGGAGAGGCTGGGGGAGGAAGGGCTGATGCAGGAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCCCGCAACGCGCCGCGTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCGCCGGTGGCTCGACGACACCGTCGCCCAGGCCTCCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCCGGATTCCAATCGCATTTGTACTCTCATCCTAAAAAAAAAAA]
[+] EMBL BM037965 [CCGAACGCTTGTCGACGCGTGGGTCGTCTCTCCTCCTTTCAAGTTGCCAGTAACCATACAGACCCCTACATCGGTCGATCAGTCAACCTCACTGCATTCTCATGGTCGTCGGAGGCAGAGACAGCACCACCAGATGAGTGCAGGANGGGGNTTCGATGGANTACCTGCCGGTGATGGCGGAGAGGCTGGGGGAGGAAGGGCTGATGCAGGAGCTCGCAAGCGGGTTCCGCCTGCTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCCCGCAACGCGCCGCGTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCGCCGGTGGCTCGACGACACCGTCGCCCAGGCCTCCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCCGGATTCCAATCGCATTTGTACTCTCATCCTAAAAAAAAAAA]
consensusID : consensus_16919#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 582 fasta sequence
[TGGGGGAGGAAGGGCTGATGCCGGGAGCTCGCAACCGGGGTTCCGCCCTGCTTCATGGACCCCGGCCTCCCGGGCTCATCACCCTTCGCCGGCCTTCCCCCGTCATCGCGCCGCTGTTCGGCCTCCGGCGGGATGTCCCGACGACGACCCTCCCGGGGGATGTCTTCCCCGGGGGCGACTTCGACGGCGACGGCGCCCCTCAGCCAAGATGGAGTTTTGCGTCCTCATGGTCACGGCTCAGCCCCGCCCTCACTGGACGACCTCGCCCGGTGGCTCGACGACCCCGTCGCCCAGGCCTCCCAGTTCCTCTTTCATTAGAAAGGTCGACATGGATAGGATTCTTC----TTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTCGCGGATTCCCATCGCATTTGTACTCTCATGTACTACCCTCTGCTTGTTTCTTCGTTCCCCAGTGGAAACTGGAATCTGAATTAATTGATCACCCAGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG]
[-] EMBL CB966994 [TGGGGGAGGAAGGGCTGATGCCGGGAGCTCGCAACCGGGGTTCCGCCCTGCTTCATGGACCCCGGCCTCCCGGGCTCATCACCCTTCGCCGGCCTTCCCCCGTCATCGCGCCGCTGTTCGGCCTCCGGCGGGATGTCCCGACGACGACCCTCCCGGGGGATGTCTTCCCCGGGGGCGACTTCGACGGCGACGGCGCCCCTCAGCCAAGATGGAGTTTTGCGTCCTCATGGTCACGGCTCAGCCCCGCCCTCACTGGACGACCTCGCCCGGTGGCTCGACGACCCCGTCGCCCAGGCCTCCCAGTTCCTCTTTCATTAGAAAGGTCGACATGGATAGGATTCTTC TTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTCGCGGATTCCCATCGCATTTGTACTCTCATGTACTACCCTCTGCTTGTTTCTTCGTTCCCCAGTGGAAACTGGAATCTGAATTAATTGATCACCCAGCTTC ]
[+] EMBL CF309817 [ TGGCTCGACGACGCCGTCGCCCAGGCCTCACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTACTACACTCTGCTTGTTTCTTCGTT CCAAGTGGAAACTGGAATCTGAATTAATTGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG]
consensusID : consensus_16919#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 581 fasta sequence
[AGACAGCAGCAGCAGATGATGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGCCGGAGAGGCTGGGGGAGGAAGGGCTGATGCAGGAGCTCGCAAGCGGGTTCCGCCTGC-TCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCCGCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTC-ATGGACGAGCCT-CGCCGGTGGCTCGACGACGCCGTCGCCC-AGGCCTC-ACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTC----TTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATTAATTGATCAGCGGCCGCTCTAACATCAGAATGGTGTTG]
[-] EMBL BI305411 [AGACAGCAGCAGCAGATGATGCAGGAGGGGTTCGAGGACTACCTGCCGGTGATGCCGGAGAGGCTGGGGGAGGAAGGGCTGATGCAGGAGCTCGCAAGCGGGTTCCGCCTGC TCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCCGCTGCTCGGCCTCGGCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTC ATGGACGAGCCT CGCCGGTGGCTCGACGACGCCGTCGCCC AGGCCTC ACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTC TTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATTAATTGATCAGCGGCCGCTCTAACATCAGAATGGTGTTG]
[-] EMBL BU673718 [ TGATGCAGGAGCTCGCAATCGGGTTCCTCCTGCTTCATGGACCCGGCCTCCGGGCTCATCACCTTCGACAGCCTCCGCCGCAACGCGCCGCTGCTCGGCCTCGTCGGGATGTCCGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAGCGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTC ATGGACGAGCCT CGCCGGTGGCTCGACGACGCCGTCGCCC AGGCCTC ACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTC TTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATT ]
[+] EMBL BE229596 [ cgagCARGCTCARCCCCGACCTCMAAGGACGAGCCTCCGCCGGTGGCTCGACGACGCCGTCGCCCRAGGCCTCAACAGTTCCTCTTTCATTAGAAAGTTCGACATGGATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTCTCATGTACTACACTCTGCTTGTTTC ]
consensusID : consensus_16919#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 394 fasta sequence
[GCTGGTCGGCCTCGGCGGGAGGTCCCACCACGCCCTCCGGGGGAAGCTCGCCGAGGGGGACTTTGACGGGGACGGCGCCCTCAACGAAAAGGAGTTTTGGGTCCTCATGGTCAGGGTCAGCCCCGACCTCATGGACGAGCCTTGCCGGTGGCTTGAAGACCCCGTTGCCCAGGCCTCACAGTTCCTTTTTCATTAAAAAGTTTGACAAGGAAAGGATTTTTCTTTTTTCTTTCTTTTTTCTTTCTTCTCGGGGTTCAAAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTTGCGGATTCCAATCGCATTTGGACTTTCATGGACTACCCTCTGCTTGTTTTTTTGTTCCAAGTGGAAACTGGAATTTGAATTAATTGATCAGCAAGGTTT]
[-] EMBL BI306235 [GCTGGTCGGCCTCGGCGGGAGGTCCCACCACGCCCTCCGGGGGAAGCTCGCCGAGGGGGACTTTGACGGGGACGGCGCCCTCAACGAAAAGGAGTTTTGGGTCCTCATGGTCAGGGTCAGCCCCGACCTCATGGACGAGCCTTGCCGGTGGCTTGAAGACCCCGTTGCCCAGGCCTCACAGTTCCTTTTTCATTAAAAAGTTTGACAAGGAAAGGATTTTTCTTTTTTCTTTCTTTTTTCTTTCTTCTCGGGGTTCAAAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTTGCGGATTCCAATCGCATTTGGACTTTCATGGACTACCCTCTGCTTGTTTTTTTGTTCCAAGTGGAAACTGGAATTTGAATTAATTGATCAGCAAGGTTT]
consensusID : consensus_16919#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence
[TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGATGCAGGAGGGGTTCGAGGACTACCTGCCGGTGCATGGCGGCAGCAGGCTGGGGGCGGCACGGGCTGCTGCCGGAGCTCGCCAAGCGGGTTCCGCCTGCTCATGGCACCCGGCCTCCGGTGCTCATCCACCTTCGCACAGCCTCCGCCGCCAACGCGCCCGCTGCTCTGGCCTCGTGCGGGCATGTCCTGCACGCACGCACCTCCGGGGGCATGCTCTGCCGCAGGGCGCACTTCGGCACGGCGCACGGGGCCCGTCCAGCGCAGC]
[+] EMBL CB965434 [TGGCGGCGGGGCAGAGACAGCAGCAGCAGATGATGCAGGAGGGGTTCGAGGACTACCTGCCGGTGCATGGCGGCAGCAGGCTGGGGGCGGCACGGGCTGCTGCCGGAGCTCGCCAAGCGGGTTCCGCCTGCTCATGGCACCCGGCCTCCGGTGCTCATCCACCTTCGCACAGCCTCCGCCGCCAACGCGCCCGCTGCTCTGGCCTCGTGCGGGCATGTCCTGCACGCACGCACCTCCGGGGGCATGCTCTGCCGCAGGGCGCACTTCGGCACGGCGCACGGGGCCCGTCCAGCGCAGC]
consensusID : consensus_16919#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 232 fasta sequence
[GCTTGCGGCGCTCTAACATCAGCCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGATGCAGGAGAGGGTTCGAAGGACTACCTGCCTGGTGATGGCTGGAGAGGCTGGGGAGAGGAAGGGCTAGATGCAGAGAGCTCGCTAAGCAGGGTTCCGCCCTGCTCATGTGACCCGCGCCTCCGCGGCTCATCACCTCTCGACAGACCTCCGCCTGCAACGCGCCGTCT]
[+] EMBL CB967473 [GCTTGCGGCGCTCTAACATCAGCCATTCTCATGGCGGCGGGGCAGAGACAGCAGCAGCAGATGATGCAGGAGAGGGTTCGAAGGACTACCTGCCTGGTGATGGCTGGAGAGGCTGGGGAGAGGAAGGGCTAGATGCAGAGAGCTCGCTAAGCAGGGTTCCGCCCTGCTCATGTGACCCGCGCCTCCGCGGCTCATCACCTCTCGACAGACCTCCGCCTGCAACGCGCCGTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 ------------------------------------------------------------
consensus_16919#0 ------------------------------------------------------------
consensus_16919#3 ------------------------------------------------------------
consensus_16919#2 TGGGGGAGGAAGGGCTGATGCCGGGAGCTCGCAACCGGGGTTCCGCCCTGCTTCATGGAC 60
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 ----------CCGAACGCTTGTCGACGCGTGGGTCGTCTCTCCTCCTTTCAAGTTGCCAG 50
consensus_16919#0 -----------------------------CCTCTTCTCCTCCTCTCAAAGATCGCAAGAA 31
consensus_16919#3 ------------------------------------------------------------
consensus_16919#2 CCCGGCCTCCCGGGCTCATCACCCTTCGCCGGCCTTCCCCCGTCATCGCGCCGCTGTTCG 120
consensus_16919#4 ----------------------------------------------------GCTGGTCG 8
consensus_16919#5 ----------------------------------------------------TGGCGGC- 7
consensus_16919#6 --------------------GCTTGCGGCGCTCTAACATCAGC-CATTCTCATGGCGGC- 38
consensus_16919#1 TAACCATACAGACCCCTACATCGGTCGATCAGTCAACCTCACTGCATTCTCATGGTCGTC 110
consensus_16919#0 GCAAACAAGAACACAACAAATCGATCGATCAGTCAACCTCACT-CATTCTCATGGCGGC- 89
consensus_16919#3 ------------------------------------------------------------
consensus_16919#2 GCCTCCGGCGGGATGTCCCGACGACGACCCTCCCGGGGGATGTCTTCCCCGGGGGCGACT 180
consensus_16919#4 GCCTC-GGCGGGAGGTCCC-ACCACG--CCCTCCGGGGGAAGC--TCGCCGAGGGGGACT 62
consensus_16919#5 -GGGGCAGAGACAGCAGCAGCAGATGA-TGCAGGAG---GGGTTCGA-GGACTA----CC 57
consensus_16919#6 -GGGGCAGAGACAGCAGCAGCAGATGA-TGCAGGAGA--GGGTTCGAAGGACTA----CC 90
consensus_16919#1 GGAGGCAGAGACAGCACCACCAGATGAGTGCAGGANGG-GGNTTCGATGGANTA----CC 165
consensus_16919#0 -GGGGCAGAGACAGCAGCAGCAGATGA-TGCAGGAG---GGGTTCGA-GGACTA----CC 139
consensus_16919#3 --------AGACAGCAGCAGCAGATGA-TGCAGGAG---GGGTTCGA-GGACTA----CC 43
consensus_16919#2 -TCGACGGCGACGGCGCCCCTCAGCCAAGATGGAGTTTTGCGTCCTCATGGTCACGGCTC 239
consensus_16919#4 -TTGACGGGGACGGCGCCC-TCAACGAAAA-GGAGTTTTGGGTCCTCATGGTCAGGG-TC 118
*** ** * * * * * * * * *
consensus_16919#5 TGCCGGTGCATGGCGGCAGCAG----GCTGGGGGCGGCACGGGCT-GCTGCCG-GAGCTC 111
consensus_16919#6 TGCCTGGTGATGGCTGGAG-AG----GCTGGGGAGAGGAAGGGCTAGATGCAGAGAGCTC 145
consensus_16919#1 TGCC-GGTGATGGC-GGAG-AG----GCTGGGGG-AGGAAGGGCT-GATGCAG-GAGCTC 215
consensus_16919#0 TGCC-GGTGATGGC-GGAG-AG----GCTGGGGG-AGGAAGGGCT-GATGCAG-GAGCTC 189
consensus_16919#3 TGCC-GGTGATGCC-GGAG-AG----GCTGGGGG-AGGAAGGGCT-GATGCAG-GAGCTC 93
consensus_16919#2 AGCCCCGCCCTCACTGGACGACCTCGCCCGGTGGCTCGACGACCCCGTCGCCCAGGCCTC 299
consensus_16919#4 AGCCCCGACCTCA-TGGACGAGCCTTGCCGGTGGCTTGAAGACCCCGTTGCCCAGGCCTC 177
*** * * * * * ** * * * * * ** * ***
consensus_16919#5 GCCAAGC-GGGTTCCGCC-----TGCTCATGGCACCCG-GCCTCCGGTGCTCATCCACCT 164
consensus_16919#6 GCTAAGCAGGGTTCCGCCC----TGCTCATGTGACCCGCGCCTCCGCGGCTCATCACCTC 201
consensus_16919#1 GC-AAGC-GGGTTCCGCC-----TGCTCATG-GACCCG-GCCTCCG-GGCTCATCACCTT 265
consensus_16919#0 GC-AAGC-GGGTTCCGCC-----TGCTCATG-GACCCG-GCCTCCG-GGCTCATCACCTT 239
consensus_16919#3 GC-AAGC-GGGTTCCGCC-----TGCTCATG-GACCCG-GCCTCCG-GGCTCATCACCTT 143
consensus_16919#2 CC-AGTTCCTCTTTCATTAGAAAGGTCGACATGGATAGGATTCTTCTTTTTTCTTTCTTT 358
consensus_16919#4 AC-AGTTCCTTTTTCATTAAAAAGTTTGACAAGGAAAGGATTTTTCTTTTTTCTTTCTTT 236
* * ** * * * * *
consensus_16919#5 TCGCACAGCCTCCGCC-GCCAACGCGCC----CGCTGCTCTGGCC--------TCGTGCG 211
consensus_16919#6 TCGACAGACCTCCGCC-TGCAACGCGCC----GTCT------------------------ 232
consensus_16919#1 CGACAGCCTCCCCGCAACGCGCCGCGTG----CTCGGCCTCGGCG--------GGATGTC 313
consensus_16919#0 CGAC--AGCCTCCGCC--GCAACGCGCCGCTGCTCGGCCTCGGCG--------GGATGTC 287
consensus_16919#3 CGAC--AGCCTCCGCC--GCAACGCGCCGCTGCTCGGCCTCGGCG--------GGATGTC 191
consensus_16919#2 CTTCTTTCTTCTCGTTGTTCATAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTCG 418
consensus_16919#4 TTTCTTTCTTCTCGGGGTTCAAAGCATCAGGATTCATCAAGGGCCCTGCTCATTGGTTTG 296
** * ** *
consensus_16919#5 GGCATGTCCTGCACGCACGCACCTC-CGGGGGCATGCTCTGCCG----CAGGGCGCACTT 266
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 CGACGACGACCTCCGGGGGATGCTC-CCGAGGGCGACTTCGACGGCGACGGCGCCCTCAG 372
consensus_16919#0 CGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAG 347
consensus_16919#3 CGACGACGACCTCCGGGGGATGCTCGCCGAGGGCGACTTCGACGGCGACGGCGCCCTCAG 251
consensus_16919#2 CGGATTCCCATCGCATTTGTACTCTCATGTACTACCCTCTGCTTGTTTCTTCGTTCCCCA 478
consensus_16919#4 CGGATTCCAATCGCATTTGGACTTTCATGGACTACCCTCTGCTTGTTTTTTTGTTCCA-A 355
consensus_16919#5 CGGCACGGCGCACGGGGCCCGTCCAGCGCAGC---------------------------- 298
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 CGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCG 432
consensus_16919#0 CGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCG 407
consensus_16919#3 CGAGATGGAGTTCTGCGTCCTCATGGTCAGGCTCAGCCCCGACCTCATGGACGAGCCTCG 311
consensus_16919#2 GTGGAAACTGGAATCTGAATTAATTGATCACCCAGCTTCAAAAAAAAAAAAAAAAAAAAA 538
consensus_16919#4 GTGGAAACTGGAATTTGAATTAATTGATCAGCAAGGTTT--------------------- 394
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 CCGGTGGCTCGACGACACCGTCGCCCAGGCCTCCACAGTTCCTCTTTCATTAGAAAGTTC 492
consensus_16919#0 CCGGTGGCTCGACGACGCCGTCGCCCAGGCCTC-ACAGTTCCTCTTTCATTAGAAAGTTC 466
consensus_16919#3 CCGGTGGCTCGACGACGCCGTCGCCCAGGCCTC-ACAGTTCCTCTTTCATTAGAAAGTTC 370
consensus_16919#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG---------------- 582
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 GACATGGATAGGATTCTTCTTCTTTTTTTCTTTCTTTCTTCTTTCTTCTCTTGTTCATAG 552
consensus_16919#0 GACATGGATAGGATTCTTCTTTTTTCTTTCTTTCTTCTTTCTTCTCG---TTGTTCATAG 523
consensus_16919#3 GACATGGATAGGATTCTTCTTTTTTCTTTCTTTCTTCTTTCTTCTCG---TTGTTCATAG 427
consensus_16919#2 ------------------------------------------------------------
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 CATCAGGATTCATCAAGGGCACTGCTCATTGGTTC-CGGATTCCAATCGCATTTGTACTC 611
consensus_16919#0 CATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTC 583
consensus_16919#3 CATCAGGATTCATCAAGGGCACTGCTCATTGGTTCGCGGATTCCAATCGCATTTGTACTC 487
consensus_16919#2 ------------------------------------------------------------
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 TCATCCTAAAAAAAAAAA------------------------------------------ 629
consensus_16919#0 TCATGTACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATTAATT 643
consensus_16919#3 TCATGTACTACACTCTGCTTGTTTCTTCGTTCCAAGTGGAAACTGGAATCTGAATTAATT 547
consensus_16919#2 ------------------------------------------------------------
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 ------------------------------------------------------------
consensus_16919#6 ------------------------------------------------------------
consensus_16919#1 ------------------------------------------------------------
consensus_16919#0 GATCAGCAAGCTTCTTCGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 703
consensus_16919#3 GATCAGCGGCCGCTCTAACATCAGAATGGTGTTG-------------------------- 581
consensus_16919#2 ------------------------------------------------------------
consensus_16919#4 ------------------------------------------------------------
consensus_16919#5 -----------------------------------
consensus_16919#6 -----------------------------------
consensus_16919#1 -----------------------------------
consensus_16919#0 AAAAAAAAAAAATANNTTNNNNAAAAAAAAAAAAA 738
consensus_16919#3 -----------------------------------
consensus_16919#2 -----------------------------------
consensus_16919#4 -----------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||