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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_17010#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 672 fasta sequence
[GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG-GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA-GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC-TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA-CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU161869 [GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTC ]
[+] EMBL CF333820 [ CCCCTTAACAACTAAATAGCGAACCTCTGAGCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACCGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATT ATTATTCAGTTTATCTTGTCATGAaaa ]
[+] EMBL CF302754 [ gagtagaaaAATATTTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA C ]
[+] EMBL CF334862 [ CTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCCCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTG ]
[+] EMBL CF311177 [ ACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGT ]
[+] EMBL AU096892 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU096891 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCG CCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTA CACGGGAAGGAAAGCTTGCAAAGCTACTGGATGAat ]
[+] EMBL AU096880 [ TGGCTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCG CCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCANGCAG CTAACACGGGAAGGAAGGC TGCAA ]
[+] EMBL AU096881 [ GGNTTCGACGACCTTATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGG GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF311178 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGTGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGANGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAAAAAAAAAAA]
[-] EMBL CF332834 [ CAGAGTTGGTACCCTAACCTTGTTCAAGGGTACTACCAGG GTCCCCCAGCTTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGTTAATTAACCTTGTTCCATCAGGCAGCTTAGCACGGGAAGGAAGGC TGCAAAGTTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGTTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATTTGTTTTACGCAAAAAAAAAAAAAAAAAA ]
[-] EMBL CF336353 [ TCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGA GCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGGTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGGTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAAAA A AAAAAAAAAAAAAAA ]
[-] EMBL CF302753 [ AGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGANGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGC TGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAA CGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAAAAAAAAAAA]
consensusID : consensus_17010#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 598 fasta sequence
[ACATGGCCTGAAGGAG-AGAAAATTAGCGTGGCAGTTTAGCTCGGAAGAC--AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC-GAGCTT-CAT-GGA-TAACCT-CCTTGC-TTGCCT-CCCCTGTG-CCCG-CCCAGCCGAAG-CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC-TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA]
[+] EMBL CF332950 [ACATGGCCTGAAGGAGTAGAAAATTAGCGTGGCAGTTTAGCTCGGAAGAC AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TA ]
[+] EMBL AK062419 [ ttatc atcgAATTAGCGTGGCAGTTTAGCTCGGAAGAC AGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGCCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCAC ]
[+] EMBL CB629317 [ caGAACACTAAGGCAGAGCAAGAGGTAGCACATCCTCTCGAAAGGGAAGATATGAGCGACCAGAGCACGTACCCCAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGTCGGCGGTGGCAAGGCGAACGCATCCAAGAAAGACCAACC GGGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATAATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTT ]
[+] EMBL CF332835 [ CAGAGCAAGAGGTAGCACATCCTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATC ]
[+] EMBL CF326202 [ CTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA]
[+] EMBL CF302844 [ CTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAaa ]
[-] EMBL CF302845 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCAT ATTTTGT AGGAAAAAA ]
[-] EMBL CF333819 [ CCTGGTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGAaaaaa ]
[+] EMBL AU198114 [ GTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACC GAGCTT CAT GGA TAACCT CCTTGC TTGCCT CCCCTGTG CCCG CCCAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATCTTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAAaa ]
[+] EMBL AU031978 [ CAACCGGNGCTTCCATGGGANTAACCTCCCTTGCTTTGCNTCCCCCTGTGCCCCGCCCCAGCCGAAGCCCAANAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTACTACTACTTCACACAAaaaaaa ]
[+] EMBL CF301537 [ gagtagaaaAGCCGAAG CCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAaa ]
[-] EMBL CF301538 [ CAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTATTCAGTTTATC TTGTCATGATTTTGTGAGGAAAAAA ]
consensusID : consensus_17010#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 544 fasta sequence
[GAGTAGAAAATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC-TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA-CGTCGTTAATTAGTTCAATCCGGATTGC-TCATTTGC-GTTTTGTGTACTA-GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF298716 [GAGTAGAAAATCATCGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTTCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA TTCAAAAAAAAAAA ]
[+] EMBL CF333066 [GAGTAGAAA GAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAGCCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA AAAAAA ]
[+] EMBL CF336352 [ CGAATTAGCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC T ATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATT ]
[-] EMBL CF301475 [ GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA TTCAAAAAAAAAAAAA ]
[+] EMBL CF302628 [ CGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGCCCCCCAGCCTCGGCGGCGGCCGGTCTATATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAATATAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ]
[+] EMBL CF301564 [ CGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ]
[+] EMBL OSC8961 [ GTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGNCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAG TACTGCATGATTATTCCCATTGTTTGTTTGATTATTCAACATCTAAGTAAGCACCGTGGTTAATTAGTTCAAT ]
[-] EMBL CF333065 [ TGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAGCCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCATTA AAAAAAA ]
[+] EMBL OSS15834A [ GTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATNCGGATTGC TCATTTGC GGTTTGTGTACTA GTGAACGNTTTATGTATT ]
[+] EMBL OSR3009A [ TAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCC TCTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGTTACTGCATGATTATG CCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTT ]
[+] EMBL CF302044 [ AGGCAGAGCAAGAGGTACCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAATATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGC ]
[+] EMBL CF301118 [ CAGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC ]
[-] EMBL CF301117 [ AGAGCAAGAGGTAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ]
[+] EMBL CF301476 [ GGGAGCACATCC TCTCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGC ]
[+] EMBL C73865 [ CTCCGAA GGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGNTGCAAAGTTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATNCGGATTTCTTAATTTGCGGTTTTGTGTACTAGGTGGACcggtt ]
[+] EMBL AU164236 [ TCCGAAGGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ]
[+] EMBL CA754999 [ GAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCTAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAA ]
[-] EMBL CF302533 [ TATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAAAAAAAA ]
[-] EMBL CF301563 [ CCCAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAGCCTAGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGCA CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCA A AAAAAAAA ]
[+] EMBL AU161870 [ ATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCCCAGCCGAAGCCAAGAACGACGCGNGCTAACTAACCTTGCTCCNTCAGGCAGCCTAGCNCGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCN CGTCGTTAATTAGTTCAATCCGGATTGC TCATTTGC GTTTTGTGTACTA GTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCTTTTGGATTCATTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_17010#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 446 fasta sequence
[CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAGCCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCCCAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAGCCTAGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTGTGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCAAGGTTAAATTGGAATAATAATACTTCACCCAAAAAA]
[-] EMBL CF334863 [CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAGCCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCCCAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAGCCTAGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTATTCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTGTGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTTTGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCAAGGTTAAATTGGAATAATAATACTTCACCCAAAAAA]
consensusID : consensus_17010#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 361 fasta sequence
[GTGGCAGTTTAGCTCGGAAGACAGGCAGAGAAGAGGTAGCACATCCTCTCCGAAGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGTCGGNNACCAAGATAACACGGCGGCCGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGCTCCCCTGTGCCCGCCAGTCGAAGCAAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAGCTAGCACGGGAAGGAAGGTNCAAAGTACTTNATGATTATGCCAGTGTTTGTTTGATTATTCAGCATCTAGNAAGACGTC]
[+] EMBL OSC9121 [GTGGCAGTTTAGCTCGGAAGACAGGCAGAGAAGAGGTAGCACATCCTCTCCGAAGGAAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCCCAGCCTCGGCGTCGGNNACCAAGATAACACGGCGGCCGCGGTGGCAAGTCCAACGCAGCCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGCTCCCCTGTGCCCGCCAGTCGAAGCAAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAGCTAGCACGGGAAGGAAGGTNCAAAGTACTTNATGATTATGCCAGTGTTTGTTTGATTATTCAGCATCTAGNAAGACGTC]
consensusID : consensus_17010#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 221 fasta sequence
[AACCTTGCTCCATCCANCCCACCCTCCCCACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCAAAAA]
[+] EMBL AU089791 [AACCTTGCTCCATCCANCCCACCCTCCCCACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTATTCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTGTGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTTTGGATTCAAAAA]
consensusID : consensus_17010#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 103 fasta sequence
[TTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF298846 [TTCCCCTTTGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF298847 [ CATGATTTTGTGAGGAAAGAATCTGTTTTACGCATGGTTAAATTGTACTAAAAAAAAAAAAAAAAtta ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_17010#2 ------------------------------------------------------------
consensus_17010#4 ------------------------------------------------------------
consensus_17010#0 GCTGTCCTTTGCCAGTTAATTTGATAGTTGCCCCTTAACAACTAAATAGCGAACCTCTGA 60
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 ------------------------------------------------------------
consensus_17010#3 ------------------------------------------------------------
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 ---------------------------------------GAGTAGAAAATCATCGAATTA 21
consensus_17010#4 ------------------------------------------------------------
consensus_17010#0 GCAGATGGCCTTAATATCTATCTACTGAAGCTTGGCTTCGACGACCTTATCATCGAATTA 120
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 -----------------------------------ACATGGCCTGAAGGAGAGAAAATTA 25
consensus_17010#3 ------------------------------------------------------------
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 81
consensus_17010#4 --GTGGCAGTTTAGCTCGGAAGACAGGCAGAG-AAGAGGTAGCACATCCTCTCCGAAGG- 56
consensus_17010#0 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 180
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 GCGTGGCAGTTTAGCTCGGAAGACAGGCAGAGCAAGAGGTAGCACATCCTCTCCGAAGGG 85
consensus_17010#3 ------------------------------------------------------------
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 141
consensus_17010#4 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTNCTCAAGGGTACTACCAGGGTCCCC 116
consensus_17010#0 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 240
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 AAGATATGAGCGACCAGAGCTCGTACCCTAACCCTGCTCAAGGGTACTACCAGGGTCCCC 145
consensus_17010#3 ------------------------------------------------------------
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 201
consensus_17010#4 CAGCCTCGGCGTCGGNNA-CCAAGATAACACGGCGGCCG-CGGTGGCAAGTCCAACGCAG 174
consensus_17010#0 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 300
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 CAGCCTCGGCGGCGGCCGGCCAAGATAACACGGCGGCCGGCGGTGGCAAGTCCAACGCAG 205
consensus_17010#3 ----CTTGGCGGCGGCCGGCCAAAATAACACGGCGGCCGGCGGTGGCAAGTTCAACGCAG 56
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 261
consensus_17010#4 CCAAGAAAGACCANCCGAGCTTCATGGATAACCTGCTTGCTTGC-TCCCCTGTGCCCGCC 233
consensus_17010#0 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 360
consensus_17010#5 ------------------------------------------------------------
consensus_17010#1 CCAAGAAAGACCAACCGAGCTTCATGGATAACCTCCTTGCTTGCCTCCCCTGTGCCCGCC 265
consensus_17010#3 CCAAAAAAGACCAACCGAGGTTTATGGATAACCTCCTTGGTTGCCTCCCCTGTGGCCGCC 116
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 315
consensus_17010#4 -AGTCGAAGC-AAGNACGACGCGAGCTAACTAACCTTGCTNCATCAGGCAG------C-T 284
consensus_17010#0 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 414
consensus_17010#5 -------------------------------AACCTTGCTCCATCCANCCCACCCTCCCC 29
consensus_17010#1 CAGCCGAAGCCAAGAACGACGCGAGCTAACTAACCTTGCTCCATCAGGCAG------CCT 319
consensus_17010#3 CAACCGAAACCAAAAACGACGCGAGGTAAATAACCTTGCCCCATCAGGCAG------CCT 170
consensus_17010#6 ---------------------------TTCCCCTTTGGATTCATTATTCAG------TTT 27
* * *** *
consensus_17010#2 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 375
consensus_17010#4 AGCACGGGAAGGAAGG-TNCAAAG-TACTTNATGATTATGCC-AGTGTTTGTTTGATTAT 341
consensus_17010#0 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 474
consensus_17010#5 ACCCCCAACNNAACGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 89
consensus_17010#1 AGCACGGGAAGGAAGGCTGCAAAGCTACTGCATGATTATGCCCAGTGTTTGTTTGATTAT 379
consensus_17010#3 AGGACGGGAAGGAAGGCTGCAAAGGTAATGCATGATTAAGCCCAGTGTTTGTTTGATTAT 230
consensus_17010#6 ATCTTGTCATGATTTTGTGAGGAAAGAATCTGTT-TTACGCATGGT-TAAATTGTACTAA 85
* * * * * * *** ** ** * ** * **
consensus_17010#2 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 435
consensus_17010#4 TCAGCATCTA-GNAAG-ACGTC-------------------------------------- 361
consensus_17010#0 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 534
consensus_17010#5 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 149
consensus_17010#1 TCAGCATCTAAGTAAGCACGTCGTTAATTAGTTCAATCCGGATTGCTCATTTGCGTTTTG 439
consensus_17010#3 TCAGCATTTAAGTAAGGACGTTGTTAATTAGTTCAATCCGGATTGGTCATTTGGGTTTTG 290
consensus_17010#6 AAAAAAAAAAAAAAAAAA------------------------------------------ 103
* * * ** *
consensus_17010#2 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 495
consensus_17010#4 ------------------------------------------------------------
consensus_17010#0 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 594
consensus_17010#5 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 209
consensus_17010#1 TGTACTAGTGAACGATTTATGTATTTGTCGGGGGCGCATGTAATTTAATTTATTCCCCTT 499
consensus_17010#3 TGGAATAATGAACGATTTAAGTATTTGTTGGGGGGGCATGTAATTTAATTTATTCCCCTT 350
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 TGGATTCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 544
consensus_17010#4 ------------------------------------------------------------
consensus_17010#0 TGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCA 654
consensus_17010#5 TGGATTCAAAAA------------------------------------------------ 221
consensus_17010#1 TGGATTCATTATTCAGTTTATCTTGTCATGATTTTGTGAGGAAAGAATCTGTTTTACGCA 559
consensus_17010#3 TGGATTCATTAATCAGTTTATTTTGTCAAGATTTTGTGAAGAAAAAATTTGTTTTAAGCA 410
consensus_17010#6 ------------------------------------------------------------
consensus_17010#2 ---------------------------------------
consensus_17010#4 ---------------------------------------
consensus_17010#0 AAAAAAAAAAAAAAAAAA--------------------- 672
consensus_17010#5 ---------------------------------------
consensus_17010#1 TGGTTAAATTGTACTACTACTACTTCACACAATTCTTTA 598
consensus_17010#3 AGGTTAAATTGGAATAATAATACTTCACCCAAAAAA--- 446
consensus_17010#6 ---------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||