These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_17027#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 617 fasta sequence [GAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCNGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCNGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCCCCTTTGTGTTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTTTTCAGGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] [+] EMBL CA755057 [GAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCNGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCNGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCCCCTTTGTGTTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTTTTCAGGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] consensusID : consensus_17027#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 610 fasta sequence [TCCCGCTCTCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG-ACCTGGCTGAGAAGATCACCACCACCACCACTACTG-CAACCACTGTCCT-AGGTGTTGCACCTGAGAAGGGGCAC-TCTGAGGGGGTTGGC-AAGGCAGCTGAATCTGGCGAGGC-TGCCCATGGCTGCAGC-TGTGGCTCCAGC-TGC-AGG-TGCAACCCC-TGC-AACTGCTAAGGCCAAGGCGATCTAT-GACTGAATTGCCAATGCACCAGCCTG-TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT-GGCTCATG-CCTGTGTGAGTGTGACTG-AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT-AAATATTGTTTTGTGTATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL OSR28121A [ CCGCTCTCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCANCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCACTTTTGAGGGGGTTGGCAAAGGCAGCTGAATCTGGCGAGGCTTGCCCATGGNTGCAGCTTGTGGCTCCAGCTTGCAAGGTTGCAACCCCTTGCAAACTGnt ] [+] EMBL AK105219 [tcaatCTCTCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATAT ] [+] EMBL AU071240 [ ATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCC ] [+] EMBL AU071105 [ ATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGA ] [+] EMBL AU070992 [ ATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGATGGGCTCATG CCTGTGTGAGTGTGACTGCAATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATATAAAATATTGTNTTGTGTATGTGAAAAAA ] [+] EMBL AU071159 [ ATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACNGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCNG ACCNGGCTGAGAAGATCACCACCACCACCACNACNG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC NGC AACNGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTA AAAAAAAAAAA ] [+] EMBL AU070783 [ TCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATNGTNTTGTGTATGTG ] [+] EMBL AU095584 [ CAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTNCGGTGGAAGTTGCAACTGCGGTT CTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAAAAAA ] [+] EMBL AU070884 [ AACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGA ] [+] EMBL AU070864 [ TACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTAaaanaaana ] [+] EMBL AU071000 [ ACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGNCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTATAGACTGAATTGCCAATGCACCAGCCTGTTCTACATGATGAATAAATAAAGAGTCCATCCANTGTGAT GGCTCATGACCT ] [+] EMBL AU095613 [ CAACTGCGGTTCCTGCGGATNCGGCGGTGGCTGCGGAAAGATNTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCNCCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGNGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA760372 [ GCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTGGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU101700 [ GCGGCGGTGGCTGCGGAAAGATGTACCCTGAACCTGGCTGAGAAGATCACCACCACCNCCACTACTGCCAACCACTGTCCT AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGNAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTA AAAAAA ] [+] EMBL AU101710 [ AAAGATNTACCCTG ACCTGGCTGAGAAGATCACCACCACCACCACTACTG CAACCACTGTCCTAAGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTA AAAAAAAAANAAA ] [+] EMBL AU070816 [ T AGGTGTTGCACCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTNTTGTGTATGTGAAAAAAA ] [+] EMBL AU070805 [ CCTGAGAAGGGGCAC TCTGAGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAAAA ] [+] EMBL AU071203 [ AGGGGGTTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU071098 [ TTGGC AAGGCAGCTGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAAA ] [+] EMBL AU070843 [ TGAATCTGGCGAGGC TGCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTAaaaaa ] [+] EMBL AU071071 [ GCCCATGGCTGCAGC TGTGGCTCCAGC TGC AGG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTAaaaaa ] [+] EMBL AU071157 [ ctt anCCCATGGCTGCAGC TGTGGCTCCAGC TGC AAG TGCAACCCC TGC AACTGCTAAGGCCAAGGCGATCTAT GACTGAATTGCCAATGCACCAGCCTG TCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGAT GGCTCATG CCTGTGTGAGTGTGACTG AATCCATCAGTGTGTGTGTGTGTTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGTGGCTGGAAATCCATGTGGTTTCTAGCTTTATGTAAATGTTGTTTGTGAAATAT AAATATTGTTTTGTGTATGTGAAAAAA ] consensusID : consensus_17027#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 581 fasta sequence [ANATNTNGCATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA-AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG-CCCATGGCTGCAGCTGTGGCTCCAGCT-GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA-TGCACCAGCC-TGTCTACATG-ATGAATAAA-TAAAGAGTCCAT-CCAGTGTG-ATGGCTCATGCCTGTGTGTGTGTGTG-TTTGTCT-CAA-CCATGTGCGAATCA-GGTGTC-AAAAGT-CCGT-GGCT-GGAAATC-AATGT-GGTTTCT-GGCTTTATGTAAATGTTGTTTGTGAAATA-TAAAT-ATTGGTTTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGGGNG] [+] EMBL OSR3329A [ANATNTNGCATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTNCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTNAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTNCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGATTTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATG CTGTGTGTGTGTGTG TTTGTCT CAA CCATGTG ] [+] EMBL AU070898 [ CATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAAAAAAAAAAAn ] [+] EMBL OSR31061A [ CATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTTCTAAGGCCAAGATGATCTATGACTNAATTNCCAATTGCACCAGCC TGTCTACATG ATGGAT AA T AAGAGTCCA ] [+] EMBL AU065364 [ CATACAAGTNCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTNTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCTNGCAAGTGCAACCCCTGCNACTGCTAAGGCCAAGATGATCTATGANTGAATTGCCAA TGCACCAGCCTTGTCTACATGAATGAATAAATTAAAGAGTCCAT CCAGTGTGAATGGCT ] [+] EMBL AU184813 [ CATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT ] [+] EMBL AU162491 [ ATACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTNCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAA ] [+] EMBL AU071218 [ AAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGTGGGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTA ] [+] EMBL AU070715 [ TGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGTGGGCTGGGAAATC AAT ] [+] EMBL OSR3321A [ AAGAGACCCNGNAGCTCANGATNTCGTGCGGTGGACAGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGAT ] [+] EMBL AU070952 [ TGCGGTGGA AGTTGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAAAA ] [+] EMBL AU070846 [ TGCAACTGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAANGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTGCCCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCTGGGCTTTATGTAAATGTTGTTTGTGAAATATTAAATAATTGGTTTGTCTAtg ] [+] EMBL AU184814 [ TGCGGTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAA ] [+] EMBL AU184672 [ CGGTGGCTGTGGAAANATGTACCCTGACCTGGCTGAGAAGATCAACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTNAGGTGATGGTTGGCAAGGCAGGTGAGTNTGGTGAGGCTG CCCATGGCTGCANCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCATCCCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTGTTTTTTCTCCAACCCATNTGCGAATCAGGGTNTCAAAAAGTCCCGTGGGCT GGAAATCAAATGTGGGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAAAAAAA ] [+] EMBL AU070732 [ TCGGTNTTGCNCCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU071232 [ GTGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU071238 [ TGTTGCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAATTTAAAAAAAAAAAAA ] [+] EMBL AU071124 [ GCACCTGAGAAGGGGCATTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAAAAAAAAA ] [+] EMBL AU088648 [ GGGGCNTTTTGAGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCANCCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU070886 [ GATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTG CCCATGGCTGCAGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL AU071120 [ AGCTGTGGCTCCAGCT GCAAGTGCAACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAAAAAAAAGAAAAA ] [+] EMBL AU070682 [ AACCCCTGCAACTGCTAAGGCCAAGATGATCTATGACTGAATTGCCAA TGCACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAANGGGNG] [+] EMBL AU197616 [ ACCAGCC TGTCTACATG ATGAATAAA TAAAGAGTCCAT CCAGTGTG ATGGCTCATGCCTGTGTGTGTGTGTG TTTGTCT CAA CCATGTGCGAATCA GGTGTC AAAAGT CCGT GGCT GGAAATC AATGT GGTTTCT GGCTTTATGTAAATGTTGTTTGTGAAATA TAAAT ATTGGTTTGTCTAAAAAA ] consensusID : consensus_17027#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 558 fasta sequence [TCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTGAGGGGGTTGGCAAGGCAGCTGAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAGGTGCAACCCCTGCAACTGCTAAGGCCAGGCGATCTATGACTGAATTGCCAATGCACCAGCCTGTCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGATGGCTCATGCCTGTGTGAGTGTGACTGAATCCATCAGTGTGTGTGTGTGGTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGGGGCTGGGAATACATGTGGGTTCTAGCTTTATGTAAATGTTGGTTGGTGAAAAATAAATATTGGGTTGGGGGATGGGAATTTTAACTCTCTTAATTTTTC] [+] EMBL BE039221 [TCATTTCATCCAACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTGAGGGGGTTGGCAAGGCAGCTGAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAGGTGCAACCCCTGCAACTGCTAAGGCCAGGCGATCTATGACTGAATTGCCAATGCACCAGCCTGTCTACATGATGAATAAATAAAGAGTCCATCCAGTGTGATGGCTCATGCCTGTGTGAGTGTGACTGAATCCATCAGTGTGTGTGTGTGGTTGTGTCAACCATGTGTGAATCAGGTGTCAAAAATCGGGGCTGGGAATACATGTGGGTTCTAGCTTTATGTAAATGTTGGTTGGTGAAAAATAAATATTGGGTTGGGGGATGGGAATTTTAACTCTCTTAATTTTTC] [+] EMBL AU070914 [ AACTATACAAGTTCAAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTGAGGGGGTTGGCAAGGCAGCTGAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAGGTG ] consensusID : consensus_17027#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence [CAGGAATTCGGCACGAGATTTATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTTCCCTTTGGGTTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTTTTCAGGCTACATTATTGTTG] [+] EMBL BE039194 [CAGGAATTCGGCACGAGATTTATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTTCCCTTTGGGTTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTTTTCAGGCTACATTATTGTTG] consensusID : consensus_17027#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence [ACCACCTGGGTGGCGGCCGCAAGCTTTCAATCTCTCATTTCATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCAGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGAGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCGTGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCCGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCCCAAAAAAAAAAAAAAAAAAAGCTTGCG] [+] EMBL OSA420729 [ACCACCTGGGTGGCGGCCGCAAGCTTTCAATCTCTCATTTCATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCGGCGGTGGCTGCAGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGAGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCGTGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCCGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCCCAAAAAAAAAAAAAAAAAAAGCTTGCG] consensusID : consensus_17027#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 463 fasta sequence [TTCATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGC-GGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU070903 [TTCATCCAACTACACAAGTTCCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGC GGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAGGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU173839 [ CCTGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCGGTTCCTGCGGATGCNGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCACCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTGAGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCTCCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTGTACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTGTTGTTCATCCTGATGTACTAATGTGGACTGTGAATCTTGTGAG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_17027#0 ------------------------------------------------------------ consensus_17027#4 --------------------CAGGAATTCGGCACGAGATTTATCCAACTACACAAGTTCC 40 consensus_17027#5 ACCACCTGGGTGGCGGCCGCAAGCTTTCAATCTCTCATTTCATCCAACTACACAAGTTCC 60 consensus_17027#6 --------------------------------------TTCATCCAACTACACAAGTTCC 22 consensus_17027#1 --------------------------TCCCGCTCTCATTTCATCCAACTATACAAGTTC- 33 consensus_17027#3 ----------------------------------TCATTTCATCCAACTATACAAGTTC- 25 consensus_17027#2 ---------------------------------------ANATNTNGC-ATACAAGTTCC 20 consensus_17027#0 ----GAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCG 56 consensus_17027#4 TGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCG 100 consensus_17027#5 TGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCG 120 consensus_17027#6 TGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGTAACTGCG 82 consensus_17027#1 --AAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCG 91 consensus_17027#3 --AAGAGTTTACAAGAGACCCAGACGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCG 83 consensus_17027#2 TGAAGAGTTTACAAGAGACCCAGAAGATCAAGATGTCGTGCGGTGGAAGTTGCAACTGCG 80 ******************** *************************** ******* consensus_17027#0 GTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 116 consensus_17027#4 GTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 160 consensus_17027#5 GTTCCTGCGGATGCGGCGGTGGCTGCAGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 180 consensus_17027#6 GTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 142 consensus_17027#1 GTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 151 consensus_17027#3 GTTCCTGCGGATGCGGCGGTGGCTGCGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 143 consensus_17027#2 GTTCTTGCGGCTGCGGCGGTGGCTGTGGAAAGATGTACCCTGACCTGGCTGAGAAGATCA 140 **** ***** ************** ********************************* consensus_17027#0 CCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTG 176 consensus_17027#4 CCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTG 220 consensus_17027#5 CCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGAGGCACTTTG 240 consensus_17027#6 CCACCACCACCACTACTGCAACCACTGTCCTCGGCGTTGCACCTGAGAAGGGGCACTTTG 202 consensus_17027#1 CCACCACCACCACTACTGCAACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTG 211 consensus_17027#3 CCACCACCACCACTACTGCAACCACTGTCCTAGGTGTTGCACCTGAGAAGGGGCACTCTG 203 consensus_17027#2 ACACCACCATCACTACTGCAACCACTGTCCTCGGTGTTGCACCTGAGAAGGGGCATTTTG 200 ******** ********************* ** *************** **** * ** consensus_17027#0 AGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCT 236 consensus_17027#4 AGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCT 280 consensus_17027#5 AGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCT 300 consensus_17027#6 AGGTGATGGTTGGCAAGGCAGCTGAATCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCT 262 consensus_17027#1 AGGGG---GTTGGCAAGGCAGCTGAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCT 268 consensus_17027#3 AGGGG---GTTGGCAAGGCAGCTGAATCTGGCGAGGCTGCCCATGGCTGCAGCTGTGGCT 260 consensus_17027#2 AGGTGATGGTTGGCAAGGCAGGTGAGTCTGGTGAGGCTGCCCATGGCTGCAGCTGTGGCT 260 *** * ************* *** ***** **************************** consensus_17027#0 CCNGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTG 296 consensus_17027#4 CCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTG 340 consensus_17027#5 CCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCGTGCTGATGATCTG 360 consensus_17027#6 CCAGCTGCAAGTGCAACCCCTGCAACTGCTAAAGGGGAAGGTTATCATGCTGATGATCTG 322 consensus_17027#1 CCAGCTGCAGGTGCAACCCCTGCAACTGCTAA-GGCCAAGGCGATC-TATGACTGAATTG 326 consensus_17027#3 CCAGCTGCAGGTGCAACCCCTGCAACTGCTAA-GGCCA-GGCGATC-TATGACTGAATTG 317 consensus_17027#2 CCAGCTGCAAGTGCAACCCCTGCAACTGCTAA-GGCCAAGATGATC-TATGACTGAATTG 318 ** ****** ********************** ** * * *** * *** ** consensus_17027#0 TACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCNGTGTGTGTGAGTCAGCTTG 356 consensus_17027#4 TACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTG 400 consensus_17027#5 TACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTG 420 consensus_17027#6 TACAAGTAAATAAAGAAGCCATTTGGTGTGCAATGGCTCCAGTGTGTGTGAGTCAGCTTG 382 consensus_17027#1 C-CAATGCACCAGCCTGTCTACATGATG---AATAAATAAAGAGTCCAT---CCAGTGTG 379 consensus_17027#3 C-CAATGCACCAGCCTGTCTACATGATG---AATAAATAAAGAGTCCAT---CCAGTGTG 370 consensus_17027#2 C-CAATGCACCAGCCTGTCTACATGATG---AATAAATAAAGAGTCCAT---CCAGTGTG 371 *** * * * * ** ** *** * * ** * *** ** consensus_17027#0 TTG-TTCATCCTGATGTACTAATG--TGGACTGTGAATCTTGTGAGGTGTCCCCTTTGTG 413 consensus_17027#4 TTG-TTCATCCTGATGTACTAATG--TGGACTGTGAATCTTGTGAGGTGTTCCCTTTGGG 457 consensus_17027#5 TTG-TTCATCCCGATGTACTAATG--TGGACTGTGAATCTTGTGAGGTGTCCCAAAAAAA 477 consensus_17027#6 TTG-TTCATCCTGATGTACTAATG--TGGACTGTGAATCTTGTGAGGTGTCAAAAAAAAA 439 consensus_17027#1 ATGGCTCATGCCTGTGTGAGTGTGACTGAATCCATCAGTGTGTGTG-TGTGTTTGTGTCA 438 consensus_17027#3 ATGGCTCATGCCTGTGTGAGTGTGACTGAATCCATCAGTGTGTGTG-TGTGGTTGTGTCA 429 consensus_17027#2 ATGGCTCATGCCTGTG------------------------TGTGTG-TGTGTTTGTCTCA 406 ** **** * ** **** * *** consensus_17027#0 TTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTT 473 consensus_17027#4 TTCTTGTCTGAATCTTAGATGCTATGATATGGCCATTTGTGATTTGGGGCACCTGAAGTT 517 consensus_17027#5 AAAAAAAAAAAAGCTTGCG----------------------------------------- 496 consensus_17027#6 AAAAAAAAAAAAAAAAAAAAAAAA------------------------------------ 463 consensus_17027#1 ACCATGTGTGAATC--AGGTGTCAAAA-------ATC-GTGGCTGGAAATCCATGTGGTT 488 consensus_17027#3 ACCATGTGTGAATC--AGGTGTCAAAA-------ATC-GGGGCTGGGAATACATGTGGGT 479 consensus_17027#2 ACCATGTGCGAATC--AGGTGTCAAAA-------GTCCGTGGCTGGAAATCAATGTGGTT 457 ** consensus_17027#0 TTCAGGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 533 consensus_17027#4 TTCAGGCTACATTATTGTTG---------------------------------------- 537 consensus_17027#5 ------------------------------------------------------------ consensus_17027#6 ------------------------------------------------------------ consensus_17027#1 TCTAGCTTTATGTAAATGTTGTTTG-TGAAATATAAATATTGTTTTGTGTATGTGAAAAA 547 consensus_17027#3 TCTAGCTTTATGTAAATGTTGGTTGGTGAAAAATAAATATTGGGTTG-GGGGATGGGAAT 538 consensus_17027#2 TCTGGCTTTATGTAAATGTTGTTTG-TGAAATATAAATATTGGTTTGTCTAAAAAAAAAA 516 consensus_17027#0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 593 consensus_17027#4 ------------------------------------------------------------ consensus_17027#5 ------------------------------------------------------------ consensus_17027#6 ------------------------------------------------------------ consensus_17027#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAA 607 consensus_17027#3 TTTAACTCTCTTAATTTTTC---------------------------------------- 558 consensus_17027#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN 576 consensus_17027#0 NNNNNNNNNNNNNNNNNNNNNNNN 617 consensus_17027#4 ------------------------ consensus_17027#5 ------------------------ consensus_17027#6 ------------------------ consensus_17027#1 AAA--------------------- 610 consensus_17027#3 ------------------------ consensus_17027#2 GGGNG------------------- 581 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||