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Oryza sativa
cluster # 171 cluster # 171       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_171#0 length = 2270 sequences # 1  
consensus_171#1 length = 1060 sequences # 1  

consensusID : consensus_171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2270
fasta sequence
                              [TAACGAAACAAGCAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGATAAATAATATACAGAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCGCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGCTGCCACCTGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCCCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTATGACCATCTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCACCATCCTAAGCACCAACCTCTGGGTCTACGCATGCTCTCTAGCTACCTACTAAGTGGAAGTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTCCACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAATTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTTATATATAGGCCTTACGCTAAATTTCTTTTGGATACACACCACCGTCGATTATATCGTGCATACTTTTGTATTTCAATTAATTAATTGTGATACTTGCTTCCCACACATTGATCGCATGCACGCCACATTTGTAACATTGTTATCAAATTTCGGAAATAAATTTATCTATCGTGTGAATTATTTCAGCTTGCATGAATCTTTCTTTTTATTTTAAGCAACCTTTTTCTGGTCAAAACAAACTACACAAAAAGATGACAACCAAAATATGTTGATATATTATTAGGAGTATCCTGATTCACACCAATGCTAAAACAAAAACATAAAATTACAATAGAAAAATGTAAGTAAACATCAAGGCTAGAGCTAGGCATTTAATGCTAAAAATAAATGTCAATGTGTAGCTGTGTGAACCAAAATAGAAAAGAGAAAACAGATAGTTAGTTATTGATCGTCCTTGTTCCTGTAGAGAAACTTGTGGAGAGTATGCGTACCGGGTACCGACACGGCCTCCATATTCGACTAGAGATAGGAGTGGGCCGGATCCATCTATTATGTACTAGAGTGGGCTGTCTGGCTTGTTTTCTACTTTGTAACCCTGCCCCCCAACCTATATAAGGCGGGCAATGAGCCCCTACAAGGGCATCAGCACGGATAACCACAATCAGATCATCAGATCAATATCCACCTGGCGGATACAAATCCCCAAACAGGTGTAGGGTTTTACCTCTCATCGAGAGGGCCTGAACCTGTCTAAATTCTTGTCTTCACATCCATCCACTTTTATGTCTCGTGCGATACTCTTTTTCATATTGCCGAATTCCAGTTTAAACAGTTGGCGCGACAGGTAGGGGAAGCGTCGAATTATCCATCAAGAAGTGCAATGGAAACAACTTCAGGAATCAAAGGCATTGTTTTTGCTCGAGGGCAATCTCAATGAGATCGATGATTCTAATCTCTGACGTCGATTGGTTTGTCGTTTCAATCTATATGAAATCTTTTTTGACCTGAAATACTGCCAGGGCTTTGCCGAGCAGTGTAATTTTATATAACTCAAAAAATATTTACAAAGTTACAGTCGAAGGAGTTAAATAAAACTATAAAGCTTGCAACCAATCAAAAACAATTTGCTTTAAGGGATCCTTCATTCTGCACATATACAGAAGAACTTCTTTCACAATCTATATAATATTATTAGCTTGATTTATAATCATGGATTGATCTGTCGTACGATGTCTTCTTTGCATGCATGTACGGGTGGCTGATGAGGTCCATGGGCCGCCGAACCAGCACGTCTGCCCGGGAGGGAAAGCGAAGTCGGTGATGCCCGAAATGAATCCCATCGCACTAGTCGGCGAAAAACATGGCGCAACCCCTACCTGACGCGCCAACTGTCAAAACAAGATTCCGGCAATACTAAAAGGGGTAGCAATCAAGCTGGAAAAGTGGATAGGTTAGGACGTAGGAGGCAAAGGTTTATACAGCCGGGGAATTATTCCACCGAGTGTATTATTGATCTGATGATCTGGGAGAAAAGTTATGCCCCTAGGTACACTTGGACCCGACCTTATATAGGGGGAGGAGCCAAGATTACAATGTACAGCCCATATGGCTTACGTACTAGGCTAACGAATATGTATTACAACTGTAACTAACTGGCACTATTGGATATT]

[+] EMBL AK106996             [TAACGAAACAAGCAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGATAAATAATATACAGAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCGCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGCTGCCACCTGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCCCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTATGACCATCTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCACCATCCTAAGCACCAACCTCTGGGTCTACGCATGCTCTCTAGCTACCTACTAAGTGGAAGTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTCCACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAATTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTTATATATAGGCCTTACGCTAAATTTCTTTTGGATACACACCACCGTCGATTATATCGTGCATACTTTTGTATTTCAATTAATTAATTGTGATACTTGCTTCCCACACATTGATCGCATGCACGCCACATTTGTAACATTGTTATCAAATTTCGGAAATAAATTTATCTATCGTGTGAATTATTTCAGCTTGCATGAATCTTTCTTTTTATTTTAAGCAACCTTTTTCTGGTCAAAACAAACTACACAAAAAGATGACAACCAAAATATGTTGATATATTATTAGGAGTATCCTGATTCACACCAATGCTAAAACAAAAACATAAAATTACAATAGAAAAATGTAAGTAAACATCAAGGCTAGAGCTAGGCATTTAATGCTAAAAATAAATGTCAATGTGTAGCTGTGTGAACCAAAATAGAAAAGAGAAAACAGATAGTTAGTTATTGATCGTCCTTGTTCCTGTAGAGAAACTTGTGGAGAGTATGCGTACCGGGTACCGACACGGCCTCCATATTCGACTAGAGATAGGAGTGGGCCGGATCCATCTATTATGTACTAGAGTGGGCTGTCTGGCTTGTTTTCTACTTTGTAACCCTGCCCCCCAACCTATATAAGGCGGGCAATGAGCCCCTACAAGGGCATCAGCACGGATAACCACAATCAGATCATCAGATCAATATCCACCTGGCGGATACAAATCCCCAAACAGGTGTAGGGTTTTACCTCTCATCGAGAGGGCCTGAACCTGTCTAAATTCTTGTCTTCACATCCATCCACTTTTATGTCTCGTGCGATACTCTTTTTCATATTGCCGAATTCCAGTTTAAACAGTTGGCGCGACAGGTAGGGGAAGCGTCGAATTATCCATCAAGAAGTGCAATGGAAACAACTTCAGGAATCAAAGGCATTGTTTTTGCTCGAGGGCAATCTCAATGAGATCGATGATTCTAATCTCTGACGTCGATTGGTTTGTCGTTTCAATCTATATGAAATCTTTTTTGACCTGAAATACTGCCAGGGCTTTGCCGAGCAGTGTAATTTTATATAACTCAAAAAATATTTACAAAGTTACAGTCGAAGGAGTTAAATAAAACTATAAAGCTTGCAACCAATCAAAAACAATTTGCTTTAAGGGATCCTTCATTCTGCACATATACAGAAGAACTTCTTTCACAATCTATATAATATTATTAGCTTGATTTATAATCATGGATTGATCTGTCGTACGATGTCTTCTTTGCATGCATGTACGGGTGGCTGATGAGGTCCATGGGCCGCCGAACCAGCACGTCTGCCCGGGAGGGAAAGCGAAGTCGGTGATGCCCGAAATGAATCCCATCGCACTAGTCGGCGAAAAACATGGCGCAACCCCTACCTGACGCGCCAACTGTCAAAACAAGATTCCGGCAATACTAAAAGGGGTAGCAATCAAGCTGGAAAAGTGGATAGGTTAGGACGTAGGAGGCAAAGGTTTATACAGCCGGGGAATTATTCCACCGAGTGTATTATTGATCTGATGATCTGGGAGAAAAGTTATGCCCCTAGGTACACTTGGACCCGACCTTATATAGGGGGAGGAGCCAAGATTACAATGTACAGCCCATATGGCTTACGTACTAGGCTAACGAATATGTATTACAACTGTAACTAACTGGCACTATTGGATATT]


>consensus_171#0 TAACGAAACAAGCAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGATAAATAATATACAG AAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCG CCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGC TGCCACCTGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCC CCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTATGACCATC TCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCA CCATCCTAAGCACCAACCTCTGGGTCTACGCATGCTCTCTAGCTACCTACTAAGTGGAAG TACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTCC ACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAAT TCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTT ATATATAGGCCTTACGCTAAATTTCTTTTGGATACACACCACCGTCGATTATATCGTGCA TACTTTTGTATTTCAATTAATTAATTGTGATACTTGCTTCCCACACATTGATCGCATGCA CGCCACATTTGTAACATTGTTATCAAATTTCGGAAATAAATTTATCTATCGTGTGAATTA TTTCAGCTTGCATGAATCTTTCTTTTTATTTTAAGCAACCTTTTTCTGGTCAAAACAAAC TACACAAAAAGATGACAACCAAAATATGTTGATATATTATTAGGAGTATCCTGATTCACA CCAATGCTAAAACAAAAACATAAAATTACAATAGAAAAATGTAAGTAAACATCAAGGCTA GAGCTAGGCATTTAATGCTAAAAATAAATGTCAATGTGTAGCTGTGTGAACCAAAATAGA AAAGAGAAAACAGATAGTTAGTTATTGATCGTCCTTGTTCCTGTAGAGAAACTTGTGGAG AGTATGCGTACCGGGTACCGACACGGCCTCCATATTCGACTAGAGATAGGAGTGGGCCGG ATCCATCTATTATGTACTAGAGTGGGCTGTCTGGCTTGTTTTCTACTTTGTAACCCTGCC CCCCAACCTATATAAGGCGGGCAATGAGCCCCTACAAGGGCATCAGCACGGATAACCACA ATCAGATCATCAGATCAATATCCACCTGGCGGATACAAATCCCCAAACAGGTGTAGGGTT TTACCTCTCATCGAGAGGGCCTGAACCTGTCTAAATTCTTGTCTTCACATCCATCCACTT TTATGTCTCGTGCGATACTCTTTTTCATATTGCCGAATTCCAGTTTAAACAGTTGGCGCG ACAGGTAGGGGAAGCGTCGAATTATCCATCAAGAAGTGCAATGGAAACAACTTCAGGAAT CAAAGGCATTGTTTTTGCTCGAGGGCAATCTCAATGAGATCGATGATTCTAATCTCTGAC GTCGATTGGTTTGTCGTTTCAATCTATATGAAATCTTTTTTGACCTGAAATACTGCCAGG GCTTTGCCGAGCAGTGTAATTTTATATAACTCAAAAAATATTTACAAAGTTACAGTCGAA GGAGTTAAATAAAACTATAAAGCTTGCAACCAATCAAAAACAATTTGCTTTAAGGGATCC TTCATTCTGCACATATACAGAAGAACTTCTTTCACAATCTATATAATATTATTAGCTTGA TTTATAATCATGGATTGATCTGTCGTACGATGTCTTCTTTGCATGCATGTACGGGTGGCT GATGAGGTCCATGGGCCGCCGAACCAGCACGTCTGCCCGGGAGGGAAAGCGAAGTCGGTG ATGCCCGAAATGAATCCCATCGCACTAGTCGGCGAAAAACATGGCGCAACCCCTACCTGA CGCGCCAACTGTCAAAACAAGATTCCGGCAATACTAAAAGGGGTAGCAATCAAGCTGGAA AAGTGGATAGGTTAGGACGTAGGAGGCAAAGGTTTATACAGCCGGGGAATTATTCCACCG AGTGTATTATTGATCTGATGATCTGGGAGAAAAGTTATGCCCCTAGGTACACTTGGACCC GACCTTATATAGGGGGAGGAGCCAAGATTACAATGTACAGCCCATATGGCTTACGTACTA GGCTAACGAATATGTATTACAACTGTAACTAACTGGCACTATTGGATATT



consensusID : consensus_171#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1060
fasta sequence
                              [GTAACGAAACAAGCAGAGAGAGAGAGAGGCGGAGAGATAAATAATATACAGAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCGCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGCTGCCACCAGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCTCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTACTACCATCTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCACCATCCTGAGCACCAACCTCTGGGTCTACGTCGACCAATTGCGCAAGGTCCAGGGAGGGGCCGGCAAGGGGGACCCGAACCTGAACGCCTGCGTCGATGACTTCAGCGTAGCCGCCGGCGAGAACATCACCAGGGAGGCGCTGCAGAGCCTCGGCCGCCTCGCCGCCGCCGGAAATGGCAAGCGCAGCAAGGAGGATCTGGAGAATGCGCAAAAGTGGATCAAAGGGGTGGAGAAACCCTACAACGGTGGGATCGGGAAAGCATCCGGTTGCGAGATAGGTTACCTGTTCACTTATAGCGATGATCTCCCCGCCCAGAAAACCCTTGGATATACTTTCGACACAGCTAGCTCCCTCATCAATCACATAAAGCTTTAATAATCTAGCTATATATATAGCCTTCCATGCATGCTCTCTAGCTACCTACTAAGTGGAAGTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTCCACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAATTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTTATATATAGGCCTTACGCTAAATTTTTTTTTGGATACACACCACCGTCGATTATATCGTGCATACTTTTGTATTTCAATTAATTAATTGTGACA]

[+] EMBL AK069940             [GTAACGAAACAAGCAGAGAGAGAGAGAGGCGGAGAGATAAATAATATACAGAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCGCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGCTGCCACCAGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCTCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTACTACCATCTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCACCATCCTGAGCACCAACCTCTGGGTCTACGTCGACCAATTGCGCAAGGTCCAGGGAGGGGCCGGCAAGGGGGACCCGAACCTGAACGCCTGCGTCGATGACTTCAGCGTAGCCGCCGGCGAGAACATCACCAGGGAGGCGCTGCAGAGCCTCGGCCGCCTCGCCGCCGCCGGAAATGGCAAGCGCAGCAAGGAGGATCTGGAGAATGCGCAAAAGTGGATCAAAGGGGTGGAGAAACCCTACAACGGTGGGATCGGGAAAGCATCCGGTTGCGAGATAGGTTACCTGTTCACTTATAGCGATGATCTCCCCGCCCAGAAAACCCTTGGATATACTTTCGACACAGCTAGCTCCCTCATCAATCACATAAAGCTTTAATAATCTAGCTATATATATAGCCTTCCATGCATGCTCTCTAGCTACCTACTAAGTGGAAGTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTCCACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAATTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTTATATATAGGCCTTACGCTAAATTTTTTTTTGGATACACACCACCGTCGATTATATCGTGCATACTTTTGTATTTCAATTAATTAATTGTGACA]


>consensus_171#1 GTAACGAAACAAGCAGAGAGAGAGAGAGGCGGAGAGATAAATAATATACAGAAATGAGCA GGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGCGCCGGCGGCT TATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTGCTGCCACCAG CGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGCTCCTGCTGCG ACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTACTACCATCTCCTCCCCT ACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCCACCATCCTGA GCACCAACCTCTGGGTCTACGTCGACCAATTGCGCAAGGTCCAGGGAGGGGCCGGCAAGG GGGACCCGAACCTGAACGCCTGCGTCGATGACTTCAGCGTAGCCGCCGGCGAGAACATCA CCAGGGAGGCGCTGCAGAGCCTCGGCCGCCTCGCCGCCGCCGGAAATGGCAAGCGCAGCA AGGAGGATCTGGAGAATGCGCAAAAGTGGATCAAAGGGGTGGAGAAACCCTACAACGGTG GGATCGGGAAAGCATCCGGTTGCGAGATAGGTTACCTGTTCACTTATAGCGATGATCTCC CCGCCCAGAAAACCCTTGGATATACTTTCGACACAGCTAGCTCCCTCATCAATCACATAA AGCTTTAATAATCTAGCTATATATATAGCCTTCCATGCATGCTCTCTAGCTACCTACTAA GTGGAAGTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGT GTTGTCCACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAAC TCTCAATTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTT CTTTCTTATATATAGGCCTTACGCTAAATTTTTTTTTGGATACACACCACCGTCGATTAT ATCGTGCATACTTTTGTATTTCAATTAATTAATTGTGACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_171#0      -TAACGAAACAAGCAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGATAAATAATATACA 59
consensus_171#1      GTAACGAAACAAGCAGAGAGAGAGAG----------AGGCGGAGAGATAAATAATATACA 50
                      *************************          ***  *******************

consensus_171#0      GAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGC 119
consensus_171#1      GAAATGAGCAGGTCGAGCTCGAGCATGGCCACCGTCCTCGTGGTGTTGATGGTCGTCAGC 110
                     ************************************************************

consensus_171#0      GCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTG 179
consensus_171#1      GCCGGCGGCTTATCCCCACCATGTGCGGCCGCTGCGAAGGAGGAGAAGCCAGTGGTGGTG 170
                     ************************************************************

consensus_171#0      CTGCCACCTGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGC 239
consensus_171#1      CTGCCACCAGCGGCGGCGCCAGGGGAGGCGCCCTCCGCGGACGCGGCAGCGTTCGTCCGC 230
                     ******** ***************************************************

consensus_171#0      CCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTATGACCAT 299
consensus_171#1      TCCTGCTGCGACACCGCCCTGCAGGCCGACCGCGACGGCTCCAGCTTCTGCTACTACCAT 290
                      ****************************************************  *****

consensus_171#0      CTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCC 359
consensus_171#1      CTCCTCCCCTACGCTGCCTTCTTCGAGGGCAACCAGGTGAAGGTCGCCGAGGTGGCCGCC 350
                     ************************************************************

consensus_171#0      ACCATCCTAAGCACCAACCTCTGGGTCTACGCATGCTCTCTAGCTACCTACTAAGTGGAA 419
consensus_171#1      ACCATCCTGAGCACCAACCTCTGGGTCTACGTCGACCAATTGCGCAAGGTCCAGGGAGGG 410
                     ******** **********************    *    *    *    * * *  *  

consensus_171#0      GTACATTATTTTATTTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTGTC 479
consensus_171#1      GC-CGGCAAGGGGGACCCGAACCTGAACGCCTGCGTCGATGACT--TCAGCGTAGCCGCC 467
                     *  *   *           *  **    *       * ****    * ** *  *  * *

consensus_171#0      CACGATTTTTGGTAACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAA 539
consensus_171#1      GGCGAG-------AACATCAC------CAGGGAGGCGCTGCAGAG--CCTCGGCCGCCTC 512
                       ***        *****         **         * ** *    * *  *   *  

consensus_171#0      TTCTACATTATATATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCT 599
consensus_171#1      GCCGCCGCCGGAAATGGCAAGCGCAGCAAGGAGGATCTGGAGAATGCGCAAAAGTGGATC 572
                       *  *     * **        **   *     **    * *** *   *         

consensus_171#0      TATATATAGGCCTTACGCTAAATTTCTTTTGGATACACACCACCGTCGATTATATCGTGC 659
consensus_171#1      AAAGGGGTGGAGAAACCCTACAA--CGGTGGGATCGGGAAAGCATCCGGTTGCG----AG 626
                      *      **    ** *** *   *  * ****    *   *   ** **         

consensus_171#0      ATACTTTTGTATTTCAATTAATTAATTGTGATACTTGCTTCCCACACATTGATCGCATGC 719
consensus_171#1      ATAGGTTACCTGTTCACTTA--TAGCGATGAT-CTCCCCGCCCAGAAAACCCTTGGATAT 683
                     ***  **     **** ***  **    **** **  *  **** * *    * * **  

consensus_171#0      ACGCC--ACATTTGTAACATTGTTATCAAATTTCGGAAATAAATTTATCTATCGTGTGAA 777
consensus_171#1      ACTTTCGACACAGCTAGCTCCCTCATCAA---TCACATAAAGCTTTAATAATCTAGCTAT 740
                     **     ***    ** *    * *****   **  * * *  ****   ***  *  * 

consensus_171#0      TTATTTCAGCTTGCATGAAT-CTTTCTTTTTATTT--TAAGCA-----ACCTTTTTCTGG 829
consensus_171#1      ATATATAGCCTTCCATGCATGCTCTCTAGCTACCTACTAAGTGGAAGTACATTATTTTAT 800
                      *** *   *** **** ** ** ***   **  *  ****       ** ** ** *  

consensus_171#0      TCA--AAACAAACTACACAAAAAGATGACAACCAAAATATGTTGATATATTATTAGGAGT 887
consensus_171#1      TTATTATACTTGTTGTTAATTCCCATGATCGATTAGTGGTGTTG-TCCACGATTTTTGGT 859
                     * *  * **    *    *     ****      *    ***** *  *  ***    **

consensus_171#0      ATCCTGATTCACACCAATGCTAAAACAAAAACATA---AAATTACAATAGAAAAATGTAA 944
consensus_171#1      AACATTGTTTTTCTCAATTTTCTATTTCATATATTCCCAACTCTCAATTCTACATTATAT 919
                     * * *  **     ****  *  *    * * **    ** *  ****   * * * ** 

consensus_171#0      GTAAACATCAAGGCTAGAGCTAGGCATTTAATGCTAAAAATAAATGTCAATGTGTAGCTG 1004
consensus_171#1      ATCATTTTTTCATTCAACTTCATACATACAATTCCTCAGTTCTTTCTTA-TATATAG--G 976
                      * *   *       *     *  ***  *** *   *  *   * * * * * ***  *

consensus_171#0      TGTGAACCAAAATAGAAAAGAGAAAACAGATAGTTAGTTATTG-ATCGTCCTTGTTCCTG 1063
consensus_171#1      CCTTACGCTAAATTTTTTTTTGGATACACACCACCGTCGATTATATCGTGCATACTTTTG 1036
                       * *  * ****        * * *** *         ***  ***** * *  *  **

consensus_171#0      TAGAGAAACTTGTGGAGAGTATGCGTACCGGGTACCGACACGGCCTCCATATTCGACTAG 1123
consensus_171#1      TATTTCAATTAATTAATTGTG-ACA----------------------------------- 1060
                     **    ** *  *  *  **   *                                    

consensus_171#0      AGATAGGAGTGGGCCGGATCCATCTATTATGTACTAGAGTGGGCTGTCTGGCTTGTTTTC 1183
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TACTTTGTAACCCTGCCCCCCAACCTATATAAGGCGGGCAATGAGCCCCTACAAGGGCAT 1243
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      CAGCACGGATAACCACAATCAGATCATCAGATCAATATCCACCTGGCGGATACAAATCCC 1303
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      CAAACAGGTGTAGGGTTTTACCTCTCATCGAGAGGGCCTGAACCTGTCTAAATTCTTGTC 1363
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TTCACATCCATCCACTTTTATGTCTCGTGCGATACTCTTTTTCATATTGCCGAATTCCAG 1423
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TTTAAACAGTTGGCGCGACAGGTAGGGGAAGCGTCGAATTATCCATCAAGAAGTGCAATG 1483
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      GAAACAACTTCAGGAATCAAAGGCATTGTTTTTGCTCGAGGGCAATCTCAATGAGATCGA 1543
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TGATTCTAATCTCTGACGTCGATTGGTTTGTCGTTTCAATCTATATGAAATCTTTTTTGA 1603
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      CCTGAAATACTGCCAGGGCTTTGCCGAGCAGTGTAATTTTATATAACTCAAAAAATATTT 1663
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      ACAAAGTTACAGTCGAAGGAGTTAAATAAAACTATAAAGCTTGCAACCAATCAAAAACAA 1723
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TTTGCTTTAAGGGATCCTTCATTCTGCACATATACAGAAGAACTTCTTTCACAATCTATA 1783
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TAATATTATTAGCTTGATTTATAATCATGGATTGATCTGTCGTACGATGTCTTCTTTGCA 1843
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TGCATGTACGGGTGGCTGATGAGGTCCATGGGCCGCCGAACCAGCACGTCTGCCCGGGAG 1903
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      GGAAAGCGAAGTCGGTGATGCCCGAAATGAATCCCATCGCACTAGTCGGCGAAAAACATG 1963
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      GCGCAACCCCTACCTGACGCGCCAACTGTCAAAACAAGATTCCGGCAATACTAAAAGGGG 2023
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TAGCAATCAAGCTGGAAAAGTGGATAGGTTAGGACGTAGGAGGCAAAGGTTTATACAGCC 2083
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      GGGGAATTATTCCACCGAGTGTATTATTGATCTGATGATCTGGGAGAAAAGTTATGCCCC 2143
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      TAGGTACACTTGGACCCGACCTTATATAGGGGGAGGAGCCAAGATTACAATGTACAGCCC 2203
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      ATATGGCTTACGTACTAGGCTAACGAATATGTATTACAACTGTAACTAACTGGCACTATT 2263
consensus_171#1      ------------------------------------------------------------
                                                                                 

consensus_171#0      GGATATT 2270
consensus_171#1      -------
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)