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Oryza sativa
cluster # 172 cluster # 172       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_172#0 length = 2172 sequences # 2  

consensusID : consensus_172#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2172
fasta sequence
                              [CATAGCCTCATCAGCTGATCACTGAGTGCCTTCTCCTTCTCCTCCTCCTTTAAGAACCCTCTTCCCTGCCCATCCTTTTCTTCATCCCCTCAACTTTGCCTAAAAGGCAAGAACAAAGCCATATGATTCTCTGATCCCTTCTTCCAAGCTGCATCCCAACACAACACATTGTGGTGACACAGCAAACATAATATACACACATCCTCTTCTTCTTCTACCACCCTCCATATTCCTGCAAGAAACAACTGGAGGAAGAATCACTACTCCAACACCATGGAGGTTGCCATGGTCTGCACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGCTCCCCATACAAGTTTATACAGAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACCACCACCACTGCATCCAGTGACTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTAAAGCCCCAAGCTCCAAGGGATATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTTGGCAAGGTGACGGTGGCAGCCAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCCCTTGATGGCATTGTAGTGGAGATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGAGGAGAAGGAGATGTTTCTTATGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGGGCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAATGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCTGGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCACCCACCAAGGATGCAGAGCTATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGATCCTGCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCCTTCTATGATGATTTCGCCACCTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTTTTGGTGGACTATGTGGAAGGTTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCCATTGCCTTCCCTACAAATGTTGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAGATCTACTACTGCATAGAGTTTGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAACAGGTCGTGGAAGTCATCTCAAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTGGAGGTGTCCTACTTTGATTTTCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAACAGTGGGCTCTGGGAGGTGCACCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATTAGTGACTTCAGGGACCTGCTCATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATCCTCATCTACCCACTCCTCAGACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGACTCCGGGTCGACGGACCAGGTGATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGACGACGGGTGCTCCCACCACTGCCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGCGCCGCCGCGTCGGGCCTCGGCGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGCTGGCGCCGCCACTTCGGCCGGCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGACCCGAGGTGCATCCTCGGGCCAGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAATGGCGCATTTGCAAGCTATAGCTGACACGAGAAAGTGCAGTGTAGTGCTGTGCTGTGCCGTGCCGTGCCGTGCCGTGACAGCTGGTGGTACAATAAGAGGGGGACATAGGATAGGCAGGCGAGGCTAGGAGGGAGATCTTGTTCTTTCTTTTCGATAGCTTTCTTTTCTGCTTCGATTTGAGGCCGGCATCGTTTTGGTTGGTTGATGTGGTTGGGCGGGGGTTGATTTTGAACGGATCCTCGGTGGTGGTGATCACCATCATCACTGGGAATTTTGGAACTTTGTACAGGCTGAGGAAGCAAGAACAGCTCTAGGGCGAAAGGATAGTGATAGCGATTC]

[+] EMBL AK103272             [CATAGCCTCATCAGCTGATCACTGAGTGCCTTCTCCTTCTCCTCCTCCTTTAAGAACCCTCTTCCCTGCCCATCCTTTTCTTCATCCCCTCAACTTTGCCTAAAAGGCAAGAACAAAGCCATATGATTCTCTGATCCCTTCTTCCAAGCTGCATCCCAACACAACACATTGTGGTGACACAGCAAACATAATATACACACATCCTCTTCTTCTTCTACCACCCTCCATATTCCTGCAAGAAACAACTGGAGGAAGAATCACTACTCCAACACCATGGAGGTTGCCATGGTCTGCACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGCTCCCCATACAAGTTTATACAGAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACCACCACCACTGCATCCAGTGACTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTAAAGCCCCAAGCTCCAAGGGATATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTTGGCAAGGTGACGGTGGCAGCCAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCCCTTGATGGCATTGTAGTGGAGATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGAGGAGAAGGAGATGTTTCTTATGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGGGCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAATGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCTGGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCACCCACCAAGGATGCAGAGCTATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGATCCTGCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCCTTCTATGATGATTTCGCCACCTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTTTTGGTGGACTATGTGGAAGGTTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCCATTGCCTTCCCTACAAATGTTGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAGATCTACTACTGCATAGAGTTTGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAACAGGTCGTGGAAGTCATCTCAAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTGGAGGTGTCCTACTTTGATTTTCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAACAGTGGGCTCTGGGAGGTGCACCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATTAGTGACTTCAGGGACCTGCTCATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATCCTCATCTACCCACTCCTCAGACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGACTCCGGGTCGACGGACCAGGTGATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGACGACGGGTGCTCCCACCACTGCCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGCGCCGCCGCGTCGGGCCTCGGCGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGCTGGCGCCGCCACTTCGGCCGGCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGACCCGAGGTGCATCCTCGGGCCAGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAATGGCGCATTTGCAAGCTATAGCTGACACGAGAAAGTGCAGTGTAGTGCTGTGCTGTGCCGTGCCGTGCCGTGCCGTGACAGCTGGTGGTACAATAAGAGGGGGACATAGGATAGGCAGGCGAGGCTAGGAGGGAGATCTTGTTCTTTCTTTTCGATAGCTTTCTTTTCTGCTTCGATTTGAGGCCGGCATCGTTTTGGTTGGTTGATGTGGTTGGGCGGGGGTTGATTTTGAACGGATCCTCGGTGGTGGTGATCACCATCATCACTGGGAATTTTGGAACTTTGTACAGGCTGAGGAAGCAAGAACAGCTCTAGGGCGAAAGGATAGTGATAGCGATTC]
[+] EMBL C27307               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATTCTACAGAAGAGGAGAAGGAGATGTTTCTTATGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGGGCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAATGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCTGGAAGTAGTCACAGGCAGGGGTGAGATTGTNACCTGTTCACCCACCAAGGATGCAGAGCTATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGNTCCTGCTGCAGGAAGCTCCACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_172#0 CATAGCCTCATCAGCTGATCACTGAGTGCCTTCTCCTTCTCCTCCTCCTTTAAGAACCCT CTTCCCTGCCCATCCTTTTCTTCATCCCCTCAACTTTGCCTAAAAGGCAAGAACAAAGCC ATATGATTCTCTGATCCCTTCTTCCAAGCTGCATCCCAACACAACACATTGTGGTGACAC AGCAAACATAATATACACACATCCTCTTCTTCTTCTACCACCCTCCATATTCCTGCAAGA AACAACTGGAGGAAGAATCACTACTCCAACACCATGGAGGTTGCCATGGTCTGCACAAGA GTTAACCTGCTCATCCTCATCCTTTCTCTCTGCTCCCCATACAAGTTTATACAGAGCCCC ATGGACTTTGGCCCTTTGAACCTCCTTCCCACCACCACCACTGCATCCAGTGACTTTGGT AGAATCCTCTTCCACTCCCCATCTGCAGTTCTAAAGCCCCAAGCTCCAAGGGATATATCC CTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTTGGCAAGGTGACGGTGGCAGCCAGGGGA GCAGGTCACTCCATCCATGGACAGGCACAGGCCCTTGATGGCATTGTAGTGGAGATGAGC TCCTTGCCTTCTGAGATTGAATTCTACAGAAGAGGAGAAGGAGATGTTTCTTATGCTGAT GTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGGGCTGGCT CCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAATGCTGGC ATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCTGGAAGTA GTCACAGGCAGGGGTGAGATTGTGACCTGTTCACCCACCAAGGATGCAGAGCTATTCAAT GCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGATCCTGCTGCAG GAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCCTTCTATGATGATTTCGCCACCTTCACC AAAGACCAGGAGTTGCTGGTGTCAATGCCGGTTTTGGTGGACTATGTGGAAGGTTTCATC GTGTTGAATGAGCAATCCCTTCACAGCTCCTCCATTGCCTTCCCTACAAATGTTGACTTC AACCCAGATTTTGGCACCAAGAACAACCCTAAGATCTACTACTGCATAGAGTTTGCTGTC CACGATTACCAGAACAAGAACATCAATGTGGAACAGGTCGTGGAAGTCATCTCAAGGCAG ATGAGCCACATAGCATCCCACTTGTATAGCGTGGAGGTGTCCTACTTTGATTTTCTCAAC AGGGTTAGGATGGAGGAGATGAGCCTTAGGAACAGTGGGCTCTGGGAGGTGCACCATCCA TGGTTGAACATGTTCGTGCCAAGCGCTGGGATTAGTGACTTCAGGGACCTGCTCATGGAC AGCATCTCACCGGATAACTTCGAGGGCCTCATCCTCATCTACCCACTCCTCAGACACAAG TGGGACACCAACACGTCGGTCGTGTTACCGGACTCCGGGTCGACGGACCAGGTGATGTAC GCGGTGGGCATCCTCCGGTCGGCGAACCCCGACGACGGGTGCTCCCACCACTGCCTCCAG GAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGCGCCGCCGCGTCGGGCCTCGGCGCGAAG CAGTACCTCGCCCACCACCCGACCCCGGCCGGCTGGCGCCGCCACTTCGGCCGGCGGTGG GAGCGGTTCGCCGATCGCAAGGCCCGGTTCGACCCGAGGTGCATCCTCGGGCCAGGCCAG GGTATATTCCCCAGGGACAGCAGCAGCAGCAATGGCGCATTTGCAAGCTATAGCTGACAC GAGAAAGTGCAGTGTAGTGCTGTGCTGTGCCGTGCCGTGCCGTGCCGTGACAGCTGGTGG TACAATAAGAGGGGGACATAGGATAGGCAGGCGAGGCTAGGAGGGAGATCTTGTTCTTTC TTTTCGATAGCTTTCTTTTCTGCTTCGATTTGAGGCCGGCATCGTTTTGGTTGGTTGATG TGGTTGGGCGGGGGTTGATTTTGAACGGATCCTCGGTGGTGGTGATCACCATCATCACTG GGAATTTTGGAACTTTGTACAGGCTGAGGAAGCAAGAACAGCTCTAGGGCGAAAGGATAG TGATAGCGATTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)