These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1726#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3756 fasta sequence [TCGCGGCTTCATCCCTCCCGTACTCCCGTGTGCTGCCGTTTCTTCCGCCATGGACGGCCAACTCTGCCATTAGAGCAGTGCTCGCCTCAATCTTCGCCTTATTCTGGCACAAAATGAGGCTGGTTGTGTGGCACTGGTTTTTCTTCTTCTTCTTCACTTCTGTTTCATCGTCTTGGAGTTTGACTTCAGATGGTCTAGCCCTTCTTTCTCTGTCTAGGGATCTCATATTACCTCATTCCATAAGCTCCACTTGGAAAGCTTCTGATACAACTCCTTGTAATTGGGATGGGGTTTCCTGCAACAAAAAGAATAGTGTGGTTTCTCTTGACCTGTCATCTTCTGGAGTTTCTGGTTCTCTTGGACCCCAAATAGGACTTATGAAGAGCCTACAAGTACTCAGTTTGTCAAATAACAGCATATCTGGTTCAATCCCTCAAGAATTGGGCAATTGTAGCATGCTTGATCAATTGGATTTGTCCAGTAACAGTTTTTCTGGTGAGATACCAGCATCCCTTGGTGACATCAAAAAGCTTTCGTCTCTCTCTTTGTACAGTAACTCCCTCACTGGTGAAATACCAGAGGGGTTGTTCAAGAATCAGTTTCTGGAGCAAGTGTACCTCCATTACAATAAACTCAGTGGTTCTATCCCCTTGACAGTTGGAGAAATGACTAGCCTTAGGTACCTGTGGCTGCATGGCAATAAATTATCTGGAGTTCTACCAGATTCAATTGGCAACTGCACCAAGTTGGAGGAGCTCTATCTACTAGATAATCAATTGAGTGGGAGTCTTCCGAAAACCTTGAGCTATATCAAAGGACTGAAGATTTTCGATATTACCGCAAATAGTTTCACAGGTGAGATCACATTTAGTTTTGAGGATTGCAAGCTTGAGGTATTCATATTGTCATTCAATCAGATTAGCAACGAAATTCCATCATGGCTAGGGAATTGTAGTAGCTTGACACAGCTTGCATTTGTCAACAATAATATATCTGGCCAGATTCCATCGTCTCTGGGTTTATTGAGAAACCTCTCTCAACTTTTACTTTCTGAGAACTCACTTTCTGGGCCAATTCCTCCTGAGATAGGTAACTGCCAGTTGCTGGTGTGGCTGGAGTTGGATGCAAACCAGCTCAATGGCACTGTTCCTAAAGAGCTGGCAAATCTGAGAAAATTGGAGAAACTCTTTCTGTTTGAAAACCGCCTCATTGGGGAGTTCCCTGAGGATATTTGGAGCATCAAGAGCCTGCAAAGTGTCCTTATCTATGAAAACAGTTTTACTGGGAGGCTACCTCCAGTGCTAGCTGAGCTGAAGTTCCTGAAGAACATTACACTTTTCAACAATTTCTTCACTGGAGTTATACCACCAGATTTGGGTGTTAATAGTCGTTTAACCCAAATTGATTTCACAAACAACAGTTTTGTTGGTGGAATCCCGCCTAACATTTGTTCAGGGAAAAGATTGAGAATTTTGGACTTGGGGCTTAATCTTCTCAATGGTAGCATCCCATCCAATGTTATGGACTGCCCAAGTTTGGAACGATTTATTCTCCAAAACAACAATCTAAGTGGGCCCATTCCACAATTTAGGAACTGTGCAAATCTGAGCTATATAGATCTGAGTCATAATTCCTTAAGTGGCAACATTCCAGCAAGCTTGGGGAGATGTGTAAATATTACGATGATAAAATGGTCAGAAAACAAGTTGGTTGGTCCAATACCATCTGAAATTAGAGACTTGGTGAATTTGAGAGTGCTAAACCTCTCGCAAAACAGCCTGCAAGGTGTTCTTCCAGTGCAGATTTCTAGTTGCTCCAAGCTGTACTTGCTTGACTTGAGTTTCAACTCTTTGAATGGTTCGGCACTCACAACCGTAAGCAACCTTAAGTTTCTGTCACAACTACGGTTACAAGAGAATAAATTCAGTGGAGGCATACCTGATTCCCTCTCGCAGTTGGATATGCTTATTGAGCTGCAACTTGGTGGCAACGTTCTTGGGGGCAGTATCCCTTCATCGTTAGGAAGGTTGGTAAAACTGGGCATTGCATTGAATATTTGTAGCAATGGACTCGTTGGTGGCATTCCGCCATTATTGAGCAATTTGGTGGAGCTGCAAAGTTTAGATTTGTCACTTAATGGCCTCACTGGAGACCTAGACATGTTAGGAAACTTACAATTACTGCATGTATTGAATGTTTCCTACAATAGATTCAGTGGTCCGGTCCCAGAAAATCTTCTGAATTTTCTGGTTTCCTCACCGAGCTCCTTTAATGGCAATCCAGACCTCTGTATCTCTTGCCATACCAATGGTTCTTATTGCAAGGGGTCTAATGTTTTGAAACCTTGTGGAGAGACCAAAAAACTACACAAACACGTCAAGATTGCTGTTATAGTTATTGGTTCATTGTTCGTTGGAGCAGTTTCCATACTTATACTGAGTTGCATCCTTTTAAAGTTTTATCATCCAAAGACAAAAAATTTAGAATCAGTCAGTACTCTGTTTGAAGGTTCTTCTTCTAAATTAAATGAGGTTATAGAGGCTACTGAAAACTTTGATGACAAGTATATCATCGGTACTGGTGCTCATGGAACTGTTTACAAGACAACACTGAGGTCAGGAGAAGTATATGCTGTAAAGAAGCTTGCAATATCTGCACAGAAAGGTTCGTACAAAAGCATGATCAGAGAACTGAAGACATTAGGCAAAATCAAGCATCGGAACTTGATAAAGCTGAAAGAGTTTTGGTTAAGAAGTGAGTATGGGTTCATGCTTTATGTTTATATGGAGCAAGGTAGCCTTCAAGATGTTCTGCATGGGATCCAACCTCCTCCAAGTTTGGACTGGAGTGTGCGCTATACCATAGCTCTTGGTACTGCCCATGGGCTAGCGTATCTTCATGATGACTGTCAACCTGCAATTATTCACCGAGATATTAAGCCCAGTAATATACTTCTGAATGGGGACATGGTTCCACATATAGCAGATTTTGGCATTGCAAAGCTCATGGACCAGTCTTCTTCTGCTCCACAGACTACTGGAGTTATTGGCACCTTTGGATATATGGCCCCAGAGTTGGCATTTTCCACCAGGGGTAGTATCGAGTCCGATGTATACAGCTACGGCGTCATACTCCTTGAGCTGCTAACAAAAAAACAGGTGGTGGATCCCTCGTTCCCCGACAACATGGACATTGTCGGTTGGGTGACCGCAACGCTCAACGGCACCGACCAAATCGAACTCGTCTGCGACTCGACGCTGATGGAGGAAGTCTATGGCACGGTGGAAATAGAGGAAGTCAGCAAGGTCCTGTCCTTGGCTCTTAGGTGCGCAGCGAAGGAAGCGAGCCGAAGGCCGCCCATGGCCGATGTTGTGAAGGAGCTGACTGATGTCAAGAAATCCGCCGGGAAGTTGTCCAAGCCGGAGAAGACGGCCTCCCGGAGCTCGTCCTGACAATAGAATTCATGGTATAACCTAGCCGTTCAGCCCCTCAGGACTCAGATAGCCTGGTACTCTGGTGCAGTTTAGCTGTGTAAAATGT-AAAATGTTTGTAACCCCGGTTGTGTTTAGCACTAGTACACGGTTGGTTAGAATGGGGGGCTGGAAAAGTGGCAATTCGATATGGGATTGATTGGAACAGTTCATTCCTAACCA-TTTTTTGTGTAGTGTAAATGATCTG-TGTGCAAGTGTAACTGATTACTGAATGTAGCCTTGACTGGTGTATAACTTACAAGAATTGATAGTTCTTCTGTGCCTT] [+] EMBL AK120424 [TCGCGGCTTCATCCCTCCCGTACTCCCGTGTGCTGCCGTTTCTTCCGCCATGGACGGCCAACTCTGCCATTAGAGCAGTGCTCGCCTCAATCTTCGCCTTATTCTGGCACAAAATGAGGCTGGTTGTGTGGCACTGGTTTTTCTTCTTCTTCTTCACTTCTGTTTCATCGTCTTGGAGTTTGACTTCAGATGGTCTAGCCCTTCTTTCTCTGTCTAGGGATCTCATATTACCTCATTCCATAAGCTCCACTTGGAAAGCTTCTGATACAACTCCTTGTAATTGGGATGGGGTTTCCTGCAACAAAAAGAATAGTGTGGTTTCTCTTGACCTGTCATCTTCTGGAGTTTCTGGTTCTCTTGGACCCCAAATAGGACTTATGAAGAGCCTACAAGTACTCAGTTTGTCAAATAACAGCATATCTGGTTCAATCCCTCAAGAATTGGGCAATTGTAGCATGCTTGATCAATTGGATTTGTCCAGTAACAGTTTTTCTGGTGAGATACCAGCATCCCTTGGTGACATCAAAAAGCTTTCGTCTCTCTCTTTGTACAGTAACTCCCTCACTGGTGAAATACCAGAGGGGTTGTTCAAGAATCAGTTTCTGGAGCAAGTGTACCTCCATTACAATAAACTCAGTGGTTCTATCCCCTTGACAGTTGGAGAAATGACTAGCCTTAGGTACCTGTGGCTGCATGGCAATAAATTATCTGGAGTTCTACCAGATTCAATTGGCAACTGCACCAAGTTGGAGGAGCTCTATCTACTAGATAATCAATTGAGTGGGAGTCTTCCGAAAACCTTGAGCTATATCAAAGGACTGAAGATTTTCGATATTACCGCAAATAGTTTCACAGGTGAGATCACATTTAGTTTTGAGGATTGCAAGCTTGAGGTATTCATATTGTCATTCAATCAGATTAGCAACGAAATTCCATCATGGCTAGGGAATTGTAGTAGCTTGACACAGCTTGCATTTGTCAACAATAATATATCTGGCCAGATTCCATCGTCTCTGGGTTTATTGAGAAACCTCTCTCAACTTTTACTTTCTGAGAACTCACTTTCTGGGCCAATTCCTCCTGAGATAGGTAACTGCCAGTTGCTGGTGTGGCTGGAGTTGGATGCAAACCAGCTCAATGGCACTGTTCCTAAAGAGCTGGCAAATCTGAGAAAATTGGAGAAACTCTTTCTGTTTGAAAACCGCCTCATTGGGGAGTTCCCTGAGGATATTTGGAGCATCAAGAGCCTGCAAAGTGTCCTTATCTATGAAAACAGTTTTACTGGGAGGCTACCTCCAGTGCTAGCTGAGCTGAAGTTCCTGAAGAACATTACACTTTTCAACAATTTCTTCACTGGAGTTATACCACCAGATTTGGGTGTTAATAGTCGTTTAACCCAAATTGATTTCACAAACAACAGTTTTGTTGGTGGAATCCCGCCTAACATTTGTTCAGGGAAAAGATTGAGAATTTTGGACTTGGGGCTTAATCTTCTCAATGGTAGCATCCCATCCAATGTTATGGACTGCCCAAGTTTGGAACGATTTATTCTCCAAAACAACAATCTAAGTGGGCCCATTCCACAATTTAGGAACTGTGCAAATCTGAGCTATATAGATCTGAGTCATAATTCCTTAAGTGGCAACATTCCAGCAAGCTTGGGGAGATGTGTAAATATTACGATGATAAAATGGTCAGAAAACAAGTTGGTTGGTCCAATACCATCTGAAATTAGAGACTTGGTGAATTTGAGAGTGCTAAACCTCTCGCAAAACAGCCTGCAAGGTGTTCTTCCAGTGCAGATTTCTAGTTGCTCCAAGCTGTACTTGCTTGACTTGAGTTTCAACTCTTTGAATGGTTCGGCACTCACAACCGTAAGCAACCTTAAGTTTCTGTCACAACTACGGTTACAAGAGAATAAATTCAGTGGAGGCATACCTGATTCCCTCTCGCAGTTGGATATGCTTATTGAGCTGCAACTTGGTGGCAACGTTCTTGGGGGCAGTATCCCTTCATCGTTAGGAAGGTTGGTAAAACTGGGCATTGCATTGAATATTTGTAGCAATGGACTCGTTGGTGGCATTCCGCCATTATTGAGCAATTTGGTGGAGCTGCAAAGTTTAGATTTGTCACTTAATGGCCTCACTGGAGACCTAGACATGTTAGGAAACTTACAATTACTGCATGTATTGAATGTTTCCTACAATAGATTCAGTGGTCCGGTCCCAGAAAATCTTCTGAATTTTCTGGTTTCCTCACCGAGCTCCTTTAATGGCAATCCAGACCTCTGTATCTCTTGCCATACCAATGGTTCTTATTGCAAGGGGTCTAATGTTTTGAAACCTTGTGGAGAGACCAAAAAACTACACAAACACGTCAAGATTGCTGTTATAGTTATTGGTTCATTGTTCGTTGGAGCAGTTTCCATACTTATACTGAGTTGCATCCTTTTAAAGTTTTATCATCCAAAGACAAAAAATTTAGAATCAGTCAGTACTCTGTTTGAAGGTTCTTCTTCTAAATTAAATGAGGTTATAGAGGCTACTGAAAACTTTGATGACAAGTATATCATCGGTACTGGTGCTCATGGAACTGTTTACAAGACAACACTGAGGTCAGGAGAAGTATATGCTGTAAAGAAGCTTGCAATATCTGCACAGAAAGGTTCGTACAAAAGCATGATCAGAGAACTGAAGACATTAGGCAAAATCAAGCATCGGAACTTGATAAAGCTGAAAGAGTTTTGGTTAAGAAGTGAGTATGGGTTCATGCTTTATGTTTATATGGAGCAAGGTAGCCTTCAAGATGTTCTGCATGGGATCCAACCTCCTCCAAGTTTGGACTGGAGTGTGCGCTATACCATAGCTCTTGGTACTGCCCATGGGCTAGCGTATCTTCATGATGACTGTCAACCTGCAATTATTCACCGAGATATTAAGCCCAGTAATATACTTCTGAATGGGGACATGGTTCCACATATAGCAGATTTTGGCATTGCAAAGCTCATGGACCAGTCTTCTTCTGCTCCACAGACTACTGGAGTTATTGGCACCTTTGGATATATGGCCCCAGAGTTGGCATTTTCCACCAGGGGTAGTATCGAGTCCGATGTATACAGCTACGGCGTCATACTCCTTGAGCTGCTAACAAAAAAACAGGTGGTGGATCCCTCGTTCCCCGACAACATGGACATTGTCGGTTGGGTGACCGCAACGCTCAACGGCACCGACCAAATCGAACTCGTCTGCGACTCGACGCTGATGGAGGAAGTCTATGGCACGGTGGAAATAGAGGAAGTCAGCAAGGTCCTGTCCTTGGCTCTTAGGTGCGCAGCGAAGGAAGCGAGCCGAAGGCCGCCCATGGCCGATGTTGTGAAGGAGCTGACTGATGTCAAGAAATCCGCCGGGAAGTTGTCCAAGCCGGAGAAGACGGCCTCCCGGAGCTCGTCCTGACAATAGAATTCATGGTATAACCTAGCCGTTCAGCCCCTCAGGACTCAGATAGCCTGGTACTCTGGTGCAGTTTAGCTGTGTAAAATGT AAAATGTTTGTAACCCCGGTTGTGTTTAGCACTAGTACACGGTTGGTTAGAATGGGGGGCTGGAAAAGTGGCAATTCGATATGGGATTGATTGGAACAGTTCATTCCTAACCA TTTTTTGTGTAGTGTAAATGATCTG TGTGCAAGTGTAACTGATTACTGAATGTAGCCTTGACTGGTGTATAACTTACAAGAATTGATAGTTCTTCTGTGCCTT] [+] EMBL CA764198 [ gGCTCTTGGTACTGCCCATGGGCTAGCGTATCTTCATGATGACTGTCAACCTGCAATTATTCACCGAGATATTAAGCCCAGTAATATACTTCTGAATGGGGACATGGTTCCACATATAGCAGATTTTGGCATTGCAAAGCTCATGGACCAGTCTTCTTCTGCTCCACAGACTACTGGAGTTATTGGCACCTTTGGATATATGGCCCCAGAGTTGGCATTTTCCACCAGGAGTAGTATCGAGTCCGATGTATACAGCTACGGCGTCATACTCCTTGAGCTGCTAACAAAAAAACAGGCGGTGGATCCCTCGTTCCCCGACAACATGGACATTGTCGGTTGGGTGACCGCAACGCTCAACGGCACAGACCAAATCGAACTCGTCTGCGACTCGACGCTGATGGAGGAAGTCTATGGCACGGTGGAAATAGAGGAAGTCAGCAAGGTCCTGTCCTTGGCTCTTAGGTGCGCAGCGAAGGAAGCGAGCCGAAGGCCGCCCATGGCCGATGTTGTGAAGGAGCTGACTGACGTCAGGAAATCCGCCGGGAAGTTGTCCAAGCCGGAGAAGACGGCCTCCCGGAGCTCGTCCTGACAATAGAATTCATGGTATAACCTAGCCGTTCAGCCCCTCAGGACTCAGATAGCCTGGTACTCTGGCGCAGTTTAGCTGTGTAAAATGTAAAAATGGTTGTAACCCCGGTTGTGNTTAGCACTAGCATACGGNTGGTTAGAATGGGGGGCTGGAAAAGTGGCAATTCGATATGGGATTGATTGGAACAGCTCATTCCTAACCATTTTTTTGGGTAGGGNAAATGATCTGNGGGGCAAGNGTAACTGATTACTGAATGGAGCCTTGACTGGGGGATAACTTACAAGAATGGATAGNTCTTCTGGGCCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||