Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1730 cluster # 1730       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1730#0 length = 797 sequences # 2  

consensusID : consensus_1730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 797
fasta sequence
                              [AGCGGCGATCAGATGGAGCCAATACTGATGGCAAGAGAAAAGGTGGTGGCTTCACCAAATTATGTAGCATTTCCCCAACGCTTCAAGAGTTTGTTGGTGCCTCTGAGTTAGCTAGGACAGAGGTAGTCAAGAAGCTTTGGGCATATATCCGAGAAAATAACTTGCAAGACCCAAGCAATAAGAGGAAGATTCTGTGTGATGAGAGATTGAAGAAGATCTTCAATGTCAACTCCATCGATATGTTCCAAATGAATAAAGCATTGACGAAACACATATGGCCATTGAATTCTGATGGTCTCTTTCTCTTTCTCTCCCCTGCCCCCCCCCCTCTCTCTCTCTCTCTCTATACACACGCGCTCGCGCACAAACACAGGAAGAAAATGGGCACACACTGTGGTCCAACTTATTACAGTGCAATTTTCAGTATACTTTCCTCAACAAGTTACCATCATCTGGCCCTTGCCTATTACATAGAGATATGTGTACTAACCCAAACAGGAAGTACATAGAACCTGCTGTTTCATGTTAATTTACTCCTGACTAGGTTGCTGATGTTGCAATATTCTTTTATTTTTCTACTAGGATAAAATTTCTGATCACTGATGAATACACTACAACACAGAATTGTGCGCGGGCACTGCAGTACATAATAAGGTTTTTGAAATCTGAGCATGGAGGTAGTAGAATTTTTTTGCAGTGAAGTGGTGAGAGAAAGTAAACAAGAAAACGCAGAAAGAAAAAAAATGACCATTAAGTAAAGGAATACGCCAAACACAAAAGCTCATGTTAAAAAAGTT]

[+] EMBL CB670249             [AGCGGCGATCAGATGGAGCCAATACTGATGGCAAGAGAAAAGGTGGTGGCTTCACCAAATTATGTAGCATTTCCCCAACGCTTCAAGAGTTTGTTGGTGCCTCTGAGTTAGCTAGGACAGAGGTAGTCAAGAAGCTTTGGGCATATATCCGAGAAAATAACTTGCAAGACCCAAGCAATAAGAGGAAGATTCTGTGTGATGAGAGATTGAAGAAGATCTTCAATGTCAACTCCATCGATATGTTCCAAATGAATAAAGCATTGACGAAACACATATGGCCATTGAATTCTGATGGTCTCTTTCTCTTTCTCTCCCCTGCCCCCCCCCCTCTCTCTCTCTCTCTCTATACACACGCGCTCGCGCACAAACACAGGAAGAAAATGGGCACACACTGTGGTCCAACTTATTACAGTGCAATTTTCAGTATACTTTCCTCAACAAGTTACCATCATCTGGCCCTTGCCTATTACATAGAGATATGTGTACTAACCCAAACAGGAAGTACATAGAACCTGCTGTTTCATGTTAATTTACTCCTGACTAGGTTGCTGATGTTGCAATATTCTTTTATTTTTCTACTAGGATAAAATTTCTGATCACTGATGAATACACTACAACACAGAATTGTGCGCGGGCACTGCAGTACATAATAAGGTTTTTGAAATCTGAGCATGGAGGTAGTAGAATTTTTTTGCAGTGAAGTGGTGAGAGAAAGTAAACAAGAAAACGCAGAAAGAAAAAAAATGACCATTAAGTAAAGGAATACGCCAAACACAAAAGCTCATGTTAAAAAAGTT]
[+] EMBL AK120443             [                                                                                                                                                                                                                                                                                                               TCTTTCTCTCCCCTGCCCCCCCCCCTCTCTCTCTCTCTCTCTATACACACGCGCTCGCGCACAAACACAGGAAGAAAATGGGCACACACTGTGGTCCAACTTATTACAGTGCAATTTTCAGTATACTTTCCTCAACAAGTTACCATCATCTGGCCCTTGCCTATTACATAGAGATATGTGTACTAACCCAAACAGGAAGTACATAGAACCTGCTGTTTCATGTTAATTTACTCCTGACTAGGTTGCTAATGTTGCAATATTCTTTTATTTTTCTACTAGGATAAAATTTCTGATCACTGATGAATACACTACAACACAGAATTGTGCGCGGGCACTGCAGTACATAATAAGGTTTTTGAAATCTGAGCATGGAGGTAGTAGAATTTTTTTGCAGTGAAGTGGTGAGAGAAAGTAAAC                                                                             ]


>consensus_1730#0 AGCGGCGATCAGATGGAGCCAATACTGATGGCAAGAGAAAAGGTGGTGGCTTCACCAAAT TATGTAGCATTTCCCCAACGCTTCAAGAGTTTGTTGGTGCCTCTGAGTTAGCTAGGACAG AGGTAGTCAAGAAGCTTTGGGCATATATCCGAGAAAATAACTTGCAAGACCCAAGCAATA AGAGGAAGATTCTGTGTGATGAGAGATTGAAGAAGATCTTCAATGTCAACTCCATCGATA TGTTCCAAATGAATAAAGCATTGACGAAACACATATGGCCATTGAATTCTGATGGTCTCT TTCTCTTTCTCTCCCCTGCCCCCCCCCCTCTCTCTCTCTCTCTCTATACACACGCGCTCG CGCACAAACACAGGAAGAAAATGGGCACACACTGTGGTCCAACTTATTACAGTGCAATTT TCAGTATACTTTCCTCAACAAGTTACCATCATCTGGCCCTTGCCTATTACATAGAGATAT GTGTACTAACCCAAACAGGAAGTACATAGAACCTGCTGTTTCATGTTAATTTACTCCTGA CTAGGTTGCTGATGTTGCAATATTCTTTTATTTTTCTACTAGGATAAAATTTCTGATCAC TGATGAATACACTACAACACAGAATTGTGCGCGGGCACTGCAGTACATAATAAGGTTTTT GAAATCTGAGCATGGAGGTAGTAGAATTTTTTTGCAGTGAAGTGGTGAGAGAAAGTAAAC AAGAAAACGCAGAAAGAAAAAAAATGACCATTAAGTAAAGGAATACGCCAAACACAAAAG CTCATGTTAAAAAAGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)